RNA–Protein interactions for RNA: ENST00000558768.5

TRPM1-208, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,581 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-208ENST00000558768 PNKPQ96T60 521 aa10.44□□□□□ -0.74
TRPM1-208ENST00000558768 KLHL25Q9H0H3 589 aa10.44□□□□□ -0.74
TRPM1-208ENST00000558768 SUGCTQ9HAC7 445 aa10.44□□□□□ -0.74
TRPM1-208ENST00000558768 MCM8Q9UJA3 840 aa10.44□□□□□ -0.74
TRPM1-208ENST00000558768 E2F6O75461 281 aa10.44□□□□□ -0.74
TRPM1-208ENST00000558768 FAM200BP0CF97 657 aa10.44□□□□□ -0.74
TRPM1-208ENST00000558768 KPNB1Q14974 876 aaKnown RBP10.44□□□□□ -0.74
TRPM1-208ENST00000558768 IFIT1BQ5T764 474 aaKnown RBP10.44□□□□□ -0.74
TRPM1-208ENST00000558768 ZSCAN29Q8IWY8 852 aaPredicted RBP10.44□□□□□ -0.74
TRPM1-208ENST00000558768 OLFML3Q9NRN5 406 aa10.44□□□□□ -0.74
TRPM1-208ENST00000558768 TUBE1Q9UJT0 475 aa10.44□□□□□ -0.74
TRPM1-208ENST00000558768 POC1B-GALNT4F8VUJ3 575 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 IGHMBP2P38935 993 aaKnown RBP10.43□□□□□ -0.74
TRPM1-208ENST00000558768 ZNF827Q17R98 1081 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 RABGAP1LQ5R372 815 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 CLIC6Q96NY7 704 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 RIOK1Q9BRS2 568 aaKnown RBP10.43□□□□□ -0.74
TRPM1-208ENST00000558768 CACYBPQ9HB71 228 aaKnown RBP10.43□□□□□ -0.74
TRPM1-208ENST00000558768 FAM207AQ9NSI2 230 aaPredicted RBP10.43□□□□□ -0.74
TRPM1-208ENST00000558768 HPCAL4Q9UM19 191 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 COL3A1P02461 1466 aaPredicted RBP10.43□□□□□ -0.74
TRPM1-208ENST00000558768 CAPN9O14815 690 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 HAUS5O94927 633 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 ACADSP16219 412 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 CA4P22748 312 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 ST3GAL1Q11201 340 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 SPARCL1Q14515 664 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 BZW1Q7L1Q6 419 aaKnown RBP10.43□□□□□ -0.74
TRPM1-208ENST00000558768 ZNF354CQ86Y25 554 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 KLHL23Q8NBE8 558 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 TBC1D22AQ8WUA7 517 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 SUCLG2Q96I99 432 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 FAM96AQ9H5X1 160 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 SAMSN1Q9NSI8 373 aaKnown RBP10.43□□□□□ -0.74
TRPM1-208ENST00000558768 BIN2Q9UBW5 565 aaPredicted RBP10.43□□□□□ -0.74
TRPM1-208ENST00000558768 CAB39Q9Y376 341 aaPredicted RBP10.43□□□□□ -0.74
TRPM1-208ENST00000558768 ENC1O14682 589 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 STAT1P42224 750 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 ZBTB41Q5SVQ8 909 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.43□□□□□ -0.74
TRPM1-208ENST00000558768 MAGOHBQ96A72 148 aaKnown RBP10.43□□□□□ -0.74
TRPM1-208ENST00000558768 FMO2Q99518 471 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 DBNDD2Q9BQY9 259 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 ECT2Q9H8V3 914 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 MRPL44Q9H9J2 332 aaKnown RBP10.43□□□□□ -0.74
TRPM1-208ENST00000558768 ZFATQ9P243 1243 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 ANGEL1Q9UNK9 670 aaKnown RBP10.43□□□□□ -0.74
TRPM1-208ENST00000558768 MAPK8IP1Q9UQF2 711 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 RNF103-CHMP3A0A140T963 221 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 PGRMC1O00264 195 aaKnown RBP10.43□□□□□ -0.74
TRPM1-208ENST00000558768 SEMA3EO15041 775 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 MAFGO15525 162 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 SCP2P22307 547 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 EHHADHQ08426 723 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 DZIP3Q86Y13 1208 aaKnown RBP10.43□□□□□ -0.74
TRPM1-208ENST00000558768 HINFPQ9BQA5 517 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 TRIM15Q9C019 465 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 UNC45AQ9H3U1 944 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 ANKZF1Q9H8Y5 726 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 C6orf50Q9HD87 102 aa10.43□□□□□ -0.74
TRPM1-208ENST00000558768 ESYT2A0FGR8 921 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 MAGEA13PA6NCF6 341 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 H7C1D1 291 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 BCRP11274 1271 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 PPP2R2AP63151 447 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 KRR1Q13601 381 aaKnown RBP10.42□□□□□ -0.74
TRPM1-208ENST00000558768 RNF207Q6ZRF8 634 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 ADCK1Q86TW2 530 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 AGGF1Q8N302 714 aaeCLIP10.42□□□□□ -0.74
TRPM1-208ENST00000558768 HIPK4Q8NE63 616 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 NELFBQ8WX92 580 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 CDKL2Q92772 493 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 SLC38A10Q9HBR0 1119 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 TSPY3P0CV98 308 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 TSPY8P0CW00 308 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 PLTPP55058 493 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 TSPY1Q01534 308 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 RASGRP2Q7LDG7 609 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 UBE3BQ7Z3V4 1068 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 OR9Q1Q8NGQ5 310 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 ANKRD27Q96NW4 1050 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 SNX25Q9H3E2 840 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 NLRC4Q9NPP4 1024 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 HAUS2Q9NVX0 235 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 ZFP69BQ9UJL9 534 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 TCHHQ07283 1943 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 GSTA1P08263 222 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 NCAPHQ15003 741 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 DAB2IPQ5VWQ8 1189 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 KAZNQ674X7 775 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 TTLL7Q6ZT98 887 aa10.42□□□□□ -0.74
TRPM1-208ENST00000558768 NDUFA10O95299 355 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 MTF1Q14872 753 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 CAVIN4Q5BKX8 364 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 DIS3L2Q8IYB7 885 aaKnown RBP10.41□□□□□ -0.74
TRPM1-208ENST00000558768 CALML6Q8TD86 181 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 HAUS7Q99871 368 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 CRNKL1Q9BZJ0 848 aaKnown RBP10.41□□□□□ -0.74
TRPM1-208ENST00000558768 POGZQ7Z3K3 1410 aa10.41□□□□□ -0.74
TRPM1-208ENST00000558768 GNA11P29992 359 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms