RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 A0A1W2PQD8 194 aa8.46□□□□□ -1.06
RTF1-204ENST00000558117 A0A1W2PQY0 241 aa8.46□□□□□ -1.06
RTF1-204ENST00000558117 PDE6BP35913 854 aa8.46□□□□□ -1.06
RTF1-204ENST00000558117 CHRNA2Q15822 529 aa8.46□□□□□ -1.06
RTF1-204ENST00000558117 HSF5Q4G112 596 aaPredicted RBP8.46□□□□□ -1.06
RTF1-204ENST00000558117 HLA-DQA1Q5Y7H0 255 aa8.46□□□□□ -1.06
RTF1-204ENST00000558117 EEPD1Q7L9B9 569 aa8.46□□□□□ -1.06
RTF1-204ENST00000558117 IRF2BP1Q8IU81 584 aa8.46□□□□□ -1.06
RTF1-204ENST00000558117 KSR1Q8IVT5 923 aa8.46□□□□□ -1.06
RTF1-204ENST00000558117 SIRT2Q8IXJ6 389 aa8.46□□□□□ -1.06
RTF1-204ENST00000558117 TMEM52Q8NDY8 209 aa8.46□□□□□ -1.06
RTF1-204ENST00000558117 DNAJC2Q99543 621 aaKnown RBP8.46□□□□□ -1.06
RTF1-204ENST00000558117 DCP1AQ9NPI6 582 aaPredicted RBP8.46□□□□□ -1.06
RTF1-204ENST00000558117 BCL9O00512 1426 aa8.46□□□□□ -1.06
RTF1-204ENST00000558117 MYOM3Q5VTT5 1437 aa8.46□□□□□ -1.06
RTF1-204ENST00000558117 STXBP3O00186 592 aa8.45□□□□□ -1.06
RTF1-204ENST00000558117 FGF10O15520 208 aaPredicted RBP8.45□□□□□ -1.06
RTF1-204ENST00000558117 TBX1O43435 398 aa8.45□□□□□ -1.06
RTF1-204ENST00000558117 KCNH1O95259 989 aa8.45□□□□□ -1.06
RTF1-204ENST00000558117 TBC1D8O95759 1140 aa8.45□□□□□ -1.06
RTF1-204ENST00000558117 CTCFP49711 727 aaPredicted RBP8.45□□□□□ -1.06
RTF1-204ENST00000558117 PKN1Q16512 942 aa8.45□□□□□ -1.06
RTF1-204ENST00000558117 NLRX1Q86UT6 975 aa8.45□□□□□ -1.06
RTF1-204ENST00000558117 C16orf71Q8IYS4 520 aaPredicted RBP8.45□□□□□ -1.06
RTF1-204ENST00000558117 FAM84AQ96KN4 292 aa8.45□□□□□ -1.06
RTF1-204ENST00000558117 MRGPRX3Q96LB0 322 aa8.45□□□□□ -1.06
RTF1-204ENST00000558117 DRC1Q96MC2 740 aa8.45□□□□□ -1.06
RTF1-204ENST00000558117 THRAP3Q9Y2W1 955 aaKnown RBP8.45□□□□□ -1.06
RTF1-204ENST00000558117 CUL9Q8IWT3 2517 aa8.45□□□□□ -1.06
RTF1-204ENST00000558117 KIAA0232Q92628 1395 aa8.45□□□□□ -1.06
RTF1-204ENST00000558117 NRXN1Q9ULB1 1477 aa8.45□□□□□ -1.06
RTF1-204ENST00000558117 ITGAVP06756 1048 aa8.44□□□□□ -1.06
RTF1-204ENST00000558117 ARL4AP40617 200 aa8.44□□□□□ -1.06
RTF1-204ENST00000558117 SEPHS1P49903 392 aa8.44□□□□□ -1.06
RTF1-204ENST00000558117 GALK1P51570 392 aa8.44□□□□□ -1.06
RTF1-204ENST00000558117 SLC10A6Q3KNW5 377 aa8.44□□□□□ -1.06
RTF1-204ENST00000558117 ADGRF1Q5T601 910 aa8.44□□□□□ -1.06
RTF1-204ENST00000558117 ZNF648Q5T619 568 aaPredicted RBP8.44□□□□□ -1.06
RTF1-204ENST00000558117 EEF1DP3Q658K8 133 aa8.44□□□□□ -1.06
RTF1-204ENST00000558117 SLCO6A1Q86UG4 719 aa8.44□□□□□ -1.06
RTF1-204ENST00000558117 FBXO15Q8NCQ5 510 aaPredicted RBP8.44□□□□□ -1.06
RTF1-204ENST00000558117 NUP43Q8NFH3 380 aa8.44□□□□□ -1.06
RTF1-204ENST00000558117 CRTAC1Q9NQ79 661 aa8.44□□□□□ -1.06
RTF1-204ENST00000558117 LRP2BPQ9P2M1 347 aa8.44□□□□□ -1.06
RTF1-204ENST00000558117 MSRB2Q9Y3D2 182 aa8.44□□□□□ -1.06
RTF1-204ENST00000558117 CD2APQ9Y5K6 639 aa8.44□□□□□ -1.06
RTF1-204ENST00000558117 BACE2Q9Y5Z0 518 aa8.44□□□□□ -1.06
RTF1-204ENST00000558117 PNPLA7Q6ZV29 1317 aa8.44□□□□□ -1.06
RTF1-204ENST00000558117 PARP4Q9UKK3 1724 aaKnown RBP8.43□□□□□ -1.06
RTF1-204ENST00000558117 NOTOA8MTQ0 251 aa8.43□□□□□ -1.06
RTF1-204ENST00000558117 AURKAO14965 403 aa8.43□□□□□ -1.06
RTF1-204ENST00000558117 U2SURPO15042 1029 aaKnown RBP8.43□□□□□ -1.06
RTF1-204ENST00000558117 EFEMP2O95967 443 aa8.43□□□□□ -1.06
RTF1-204ENST00000558117 SERINC3Q13530 473 aa8.43□□□□□ -1.06
RTF1-204ENST00000558117 NBPF6Q5VWK0 638 aa8.43□□□□□ -1.06
RTF1-204ENST00000558117 RCSD1Q6JBY9 416 aa8.43□□□□□ -1.06
RTF1-204ENST00000558117 TRIM59Q8IWR1 403 aa8.43□□□□□ -1.06
RTF1-204ENST00000558117 MARCH10Q8NA82 808 aaPredicted RBP8.43□□□□□ -1.06
RTF1-204ENST00000558117 NBPF4Q96M43 638 aa8.43□□□□□ -1.06
RTF1-204ENST00000558117 PTCHD1Q96NR3 888 aa8.43□□□□□ -1.06
RTF1-204ENST00000558117 TOPAZ1Q8N9V7 1692 aa8.43□□□□□ -1.06
RTF1-204ENST00000558117 OR14I1A6ND48 311 aa8.42□□□□□ -1.06
RTF1-204ENST00000558117 PRKCAP17252 672 aa8.42□□□□□ -1.06
RTF1-204ENST00000558117 LBX1P52954 281 aa8.42□□□□□ -1.06
RTF1-204ENST00000558117 EVA1CP58658 441 aa8.42□□□□□ -1.06
RTF1-204ENST00000558117 LAPTM5Q13571 262 aa8.42□□□□□ -1.06
RTF1-204ENST00000558117 ZNF227Q86WZ6 799 aa8.42□□□□□ -1.06
RTF1-204ENST00000558117 SMC1BQ8NDV3 1235 aa8.42□□□□□ -1.06
RTF1-204ENST00000558117 BTN2A2Q8WVV5 523 aa8.42□□□□□ -1.06
RTF1-204ENST00000558117 SHISA4Q96DD7 197 aa8.42□□□□□ -1.06
RTF1-204ENST00000558117 JMJD8Q96S16 334 aa8.42□□□□□ -1.06
RTF1-204ENST00000558117 PPP1R16BQ96T49 567 aa8.42□□□□□ -1.06
RTF1-204ENST00000558117 PLCD4Q9BRC7 762 aa8.42□□□□□ -1.06
RTF1-204ENST00000558117 SIRPGQ9P1W8 387 aa8.42□□□□□ -1.06
RTF1-204ENST00000558117 IMPACTQ9P2X3 320 aa8.42□□□□□ -1.06
RTF1-204ENST00000558117 C10orf71Q711Q0 1435 aa8.42□□□□□ -1.06
RTF1-204ENST00000558117 FMN2Q9NZ56 1722 aa8.41□□□□□ -1.06
RTF1-204ENST00000558117 C2orf71A6NGG8 1288 aa8.41□□□□□ -1.06
RTF1-204ENST00000558117 PNLIPP16233 465 aa8.41□□□□□ -1.06
RTF1-204ENST00000558117 CYP4F3Q08477 520 aa8.41□□□□□ -1.06
RTF1-204ENST00000558117 GTF2IRD2BQ6EKJ0 949 aa8.41□□□□□ -1.06
RTF1-204ENST00000558117 ZNF605Q86T29 641 aa8.41□□□□□ -1.06
RTF1-204ENST00000558117 GTF2IRD2Q86UP8 949 aa8.41□□□□□ -1.06
RTF1-204ENST00000558117 A0A0C4DFX4 3053 aa8.4□□□□□ -1.06
RTF1-204ENST00000558117 TRBV23OR9-2A0A075B6M9 112 aa8.4□□□□□ -1.06
RTF1-204ENST00000558117 A0A1W2PQJ5 194 aa8.4□□□□□ -1.06
RTF1-204ENST00000558117 A0A1W2PQU0 124 aa8.4□□□□□ -1.06
RTF1-204ENST00000558117 AGRPO00253 132 aa8.4□□□□□ -1.06
RTF1-204ENST00000558117 PDPK1O15530 556 aa8.4□□□□□ -1.06
RTF1-204ENST00000558117 CYP4F8P98187 520 aa8.4□□□□□ -1.06
RTF1-204ENST00000558117 KIR3DS1Q14943 382 aa8.4□□□□□ -1.06
RTF1-204ENST00000558117 DDB1Q16531 1140 aa8.4□□□□□ -1.06
RTF1-204ENST00000558117 CCDC113Q9H0I3 377 aa8.4□□□□□ -1.06
RTF1-204ENST00000558117 EPN3Q9H201 632 aa8.4□□□□□ -1.06
RTF1-204ENST00000558117 GOLGA2P5Q9HBQ8 144 aa8.4□□□□□ -1.06
RTF1-204ENST00000558117 CRYBG1Q9Y4K1 1723 aa8.4□□□□□ -1.07
RTF1-204ENST00000558117 CICQ96RK0 1608 aaPredicted RBP8.4□□□□□ -1.07
RTF1-204ENST00000558117 PLEKHH1Q9ULM0 1364 aa8.39□□□□□ -1.07
RTF1-204ENST00000558117 FAM221BA6H8Z2 402 aa8.39□□□□□ -1.07
RTF1-204ENST00000558117 PAMP19021 973 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms