RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 CCDC192P0DO97 292 aa11.8□□□□□ -0.52
GABRB3-213ENST00000557765 EIF2AK2P19525 551 aaKnown RBP11.8□□□□□ -0.52
GABRB3-213ENST00000557765 ADORA2AP29274 412 aa11.8□□□□□ -0.52
GABRB3-213ENST00000557765 TECP42680 631 aa11.8□□□□□ -0.52
GABRB3-213ENST00000557765 NDUFA8P51970 172 aa11.8□□□□□ -0.52
GABRB3-213ENST00000557765 MRPS9P82933 396 aaKnown RBP11.8□□□□□ -0.52
GABRB3-213ENST00000557765 SPIRE1Q08AE8 756 aa11.8□□□□□ -0.52
GABRB3-213ENST00000557765 MAP2K5Q13163 448 aa11.8□□□□□ -0.52
GABRB3-213ENST00000557765 TTLL4Q14679 1199 aa11.8□□□□□ -0.52
GABRB3-213ENST00000557765 Q3C1V9 767 aa11.8□□□□□ -0.52
GABRB3-213ENST00000557765 MORN1Q5T089 497 aa11.8□□□□□ -0.52
GABRB3-213ENST00000557765 NT5DC1Q5TFE4 455 aa11.8□□□□□ -0.52
GABRB3-213ENST00000557765 KRBA2Q6ZNG9 492 aa11.8□□□□□ -0.52
GABRB3-213ENST00000557765 CABP7Q86V35 215 aa11.8□□□□□ -0.52
GABRB3-213ENST00000557765 RASSF8Q8NHQ8 419 aa11.8□□□□□ -0.52
GABRB3-213ENST00000557765 TBC1D5Q92609 795 aa11.8□□□□□ -0.52
GABRB3-213ENST00000557765 ATP6V0A1Q93050 837 aa11.8□□□□□ -0.52
GABRB3-213ENST00000557765 EMID1Q96A84 441 aaPredicted RBP11.8□□□□□ -0.52
GABRB3-213ENST00000557765 NAT10Q9H0A0 1025 aaKnown RBP11.8□□□□□ -0.52
GABRB3-213ENST00000557765 TMEM60Q9H2L4 133 aa11.8□□□□□ -0.52
GABRB3-213ENST00000557765 DACH1Q9UI36 760 aa11.8□□□□□ -0.52
GABRB3-213ENST00000557765 RBM47A0AV96 593 aaKnown RBP11.79□□□□□ -0.52
GABRB3-213ENST00000557765 DTNBO60941 627 aa11.79□□□□□ -0.52
GABRB3-213ENST00000557765 GADD45BO75293 160 aaPredicted RBP11.79□□□□□ -0.52
GABRB3-213ENST00000557765 NR1I2O75469 434 aa11.79□□□□□ -0.52
GABRB3-213ENST00000557765 P4HBP07237 508 aaKnown RBP11.79□□□□□ -0.52
GABRB3-213ENST00000557765 STAT6P42226 847 aa11.79□□□□□ -0.52
GABRB3-213ENST00000557765 CRHR2Q13324 411 aa11.79□□□□□ -0.52
GABRB3-213ENST00000557765 NBR1Q14596 966 aa11.79□□□□□ -0.52
GABRB3-213ENST00000557765 IQSEC1Q6DN90 963 aa11.79□□□□□ -0.52
GABRB3-213ENST00000557765 CAVIN1Q6NZI2 390 aaKnown RBP11.79□□□□□ -0.52
GABRB3-213ENST00000557765 METTL7BQ6UX53 244 aa11.79□□□□□ -0.52
GABRB3-213ENST00000557765 PAXIP1Q6ZW49 1069 aaPredicted RBP11.79□□□□□ -0.52
GABRB3-213ENST00000557765 SLC17A8Q8NDX2 589 aa11.79□□□□□ -0.52
GABRB3-213ENST00000557765 NACC1Q96RE7 527 aa11.79□□□□□ -0.52
GABRB3-213ENST00000557765 APBA2Q99767 749 aa11.79□□□□□ -0.52
GABRB3-213ENST00000557765 HSD17B14Q9BPX1 270 aa11.79□□□□□ -0.52
GABRB3-213ENST00000557765 ZSWIM4Q9H7M6 989 aa11.79□□□□□ -0.52
GABRB3-213ENST00000557765 KBTBD4Q9NVX7 518 aa11.79□□□□□ -0.52
GABRB3-213ENST00000557765 VAV3Q9UKW4 847 aa11.79□□□□□ -0.52
GABRB3-213ENST00000557765 PCDHA10Q9Y5I2 948 aa11.79□□□□□ -0.52
GABRB3-213ENST00000557765 LOXHD1Q8IVV2 1947 aa11.79□□□□□ -0.52
GABRB3-213ENST00000557765 A0A1B0GVL5 298 aa11.78□□□□□ -0.52
GABRB3-213ENST00000557765 PVALEFA0A1B0GWK0 134 aa11.78□□□□□ -0.52
GABRB3-213ENST00000557765 TNPO2O14787 897 aaKnown RBP11.78□□□□□ -0.52
GABRB3-213ENST00000557765 POLR2DO15514 142 aaKnown RBP11.78□□□□□ -0.52
GABRB3-213ENST00000557765 KIF20AO95235 890 aa11.78□□□□□ -0.52
GABRB3-213ENST00000557765 PSAPP07602 524 aa11.78□□□□□ -0.52
GABRB3-213ENST00000557765 LACTBP83111 547 aaPredicted RBP11.78□□□□□ -0.52
GABRB3-213ENST00000557765 E2F4Q16254 413 aa11.78□□□□□ -0.52
GABRB3-213ENST00000557765 CYP4F22Q6NT55 531 aa11.78□□□□□ -0.52
GABRB3-213ENST00000557765 FOXR2Q6PJQ5 311 aa11.78□□□□□ -0.52
GABRB3-213ENST00000557765 SASS6Q6UVJ0 657 aa11.78□□□□□ -0.52
GABRB3-213ENST00000557765 SV2BQ7L1I2 683 aa11.78□□□□□ -0.52
GABRB3-213ENST00000557765 OTUD6AQ7L8S5 288 aa11.78□□□□□ -0.52
GABRB3-213ENST00000557765 C4orf19Q8IY42 314 aa11.78□□□□□ -0.52
GABRB3-213ENST00000557765 SPATA20Q8TB22 786 aa11.78□□□□□ -0.52
GABRB3-213ENST00000557765 SNX29Q8TEQ0 813 aa11.78□□□□□ -0.52
GABRB3-213ENST00000557765 USP6NLQ92738 828 aa11.78□□□□□ -0.52
GABRB3-213ENST00000557765 ERO1AQ96HE7 468 aa11.78□□□□□ -0.52
GABRB3-213ENST00000557765 TINF2Q9BSI4 451 aa11.78□□□□□ -0.52
GABRB3-213ENST00000557765 BEGAINQ9BUH8 593 aa11.78□□□□□ -0.52
GABRB3-213ENST00000557765 PORCNQ9H237 461 aa11.78□□□□□ -0.52
GABRB3-213ENST00000557765 JPH1Q9HDC5 661 aaPredicted RBP11.78□□□□□ -0.52
GABRB3-213ENST00000557765 KIAA1468Q9P260 1216 aa11.78□□□□□ -0.52
GABRB3-213ENST00000557765 DNM3Q9UQ16 869 aa11.78□□□□□ -0.52
GABRB3-213ENST00000557765 SOWAHBA6NEL2 793 aa11.77□□□□□ -0.53
GABRB3-213ENST00000557765 ADAMTS3O15072 1205 aa11.77□□□□□ -0.53
GABRB3-213ENST00000557765 DHX15O43143 795 aaKnown RBP11.77□□□□□ -0.53
GABRB3-213ENST00000557765 ATG7O95352 703 aa11.77□□□□□ -0.53
GABRB3-213ENST00000557765 MYCLP12524 364 aaPredicted RBP11.77□□□□□ -0.53
GABRB3-213ENST00000557765 KCNA2P16389 499 aa11.77□□□□□ -0.53
GABRB3-213ENST00000557765 LIG1P18858 919 aa11.77□□□□□ -0.53
GABRB3-213ENST00000557765 QARSP47897 775 aaKnown RBP11.77□□□□□ -0.53
GABRB3-213ENST00000557765 PSMC5P62195 406 aa11.77□□□□□ -0.53
GABRB3-213ENST00000557765 SP3Q02447 781 aa11.77□□□□□ -0.53
GABRB3-213ENST00000557765 MKRN3Q13064 507 aaKnown RBP11.77□□□□□ -0.53
GABRB3-213ENST00000557765 PSMD2Q13200 908 aa11.77□□□□□ -0.53
GABRB3-213ENST00000557765 LAMC2Q13753 1193 aa11.77□□□□□ -0.53
GABRB3-213ENST00000557765 KCNB1Q14721 858 aa11.77□□□□□ -0.53
GABRB3-213ENST00000557765 POSTNQ15063 836 aa11.77□□□□□ -0.53
GABRB3-213ENST00000557765 ZSCAN23Q3MJ62 389 aa11.77□□□□□ -0.53
GABRB3-213ENST00000557765 TMEM119Q4V9L6 283 aa11.77□□□□□ -0.53
GABRB3-213ENST00000557765 BRDTQ58F21 947 aaPredicted RBP11.77□□□□□ -0.53
GABRB3-213ENST00000557765 WDR78Q5VTH9 848 aa11.77□□□□□ -0.53
GABRB3-213ENST00000557765 MIS18BP1Q6P0N0 1132 aa11.77□□□□□ -0.53
GABRB3-213ENST00000557765 LRSAM1Q6UWE0 723 aa11.77□□□□□ -0.53
GABRB3-213ENST00000557765 SH3RF1Q7Z6J0 888 aa11.77□□□□□ -0.53
GABRB3-213ENST00000557765 ZNF710Q8N1W2 664 aa11.77□□□□□ -0.53
GABRB3-213ENST00000557765 LARP4BQ92615 738 aaKnown RBP11.77□□□□□ -0.53
GABRB3-213ENST00000557765 MAML3Q96JK9 1138 aa11.77□□□□□ -0.53
GABRB3-213ENST00000557765 FAM167AQ96KS9 214 aa11.77□□□□□ -0.53
GABRB3-213ENST00000557765 CLIC6Q96NY7 704 aa11.77□□□□□ -0.53
GABRB3-213ENST00000557765 EFCC1Q9HA90 598 aa11.77□□□□□ -0.53
GABRB3-213ENST00000557765 ANKEF1Q9NU02 776 aa11.77□□□□□ -0.53
GABRB3-213ENST00000557765 ANO10Q9NW15 660 aa11.77□□□□□ -0.53
GABRB3-213ENST00000557765 SLC9A2Q9UBY0 812 aa11.77□□□□□ -0.53
GABRB3-213ENST00000557765 TUBE1Q9UJT0 475 aa11.77□□□□□ -0.53
GABRB3-213ENST00000557765 DBR1Q9UK59 544 aaKnown RBP11.77□□□□□ -0.53
GABRB3-213ENST00000557765 MRVI1Q9Y6F6 885 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms