RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 CCAR2Q8N163 923 aaKnown RBP20.4■□□□□ 0.86
SDR39U1-220ENST00000556548 ZNF577Q9BSK1 485 aa20.4■□□□□ 0.86
SDR39U1-220ENST00000556548 THAP9Q9H5L6 903 aa20.4■□□□□ 0.86
SDR39U1-220ENST00000556548 MAGEC2Q9UBF1 373 aaPredicted RBP20.4■□□□□ 0.86
SDR39U1-220ENST00000556548 DNM3Q9UQ16 869 aa20.4■□□□□ 0.86
SDR39U1-220ENST00000556548 BICDL2A1A5D9 508 aa20.39■□□□□ 0.86
SDR39U1-220ENST00000556548 DDX39AO00148 427 aaKnown RBP20.39■□□□□ 0.86
SDR39U1-220ENST00000556548 VWA5AO00534 786 aa20.39■□□□□ 0.86
SDR39U1-220ENST00000556548 SLC12A3P55017 1021 aa20.39■□□□□ 0.86
SDR39U1-220ENST00000556548 UBXN1Q04323 297 aa20.39■□□□□ 0.86
SDR39U1-220ENST00000556548 RIPK3Q9Y572 518 aa20.39■□□□□ 0.86
SDR39U1-220ENST00000556548 ADM5C9JUS6 153 aa20.39■□□□□ 0.85
SDR39U1-220ENST00000556548 GAS7O60861 476 aa20.39■□□□□ 0.85
SDR39U1-220ENST00000556548 PSMD10O75832 226 aa20.39■□□□□ 0.85
SDR39U1-220ENST00000556548 PPFIBP1Q86W92 1011 aa20.39■□□□□ 0.85
SDR39U1-220ENST00000556548 TRERF1Q96PN7 1200 aa20.39■□□□□ 0.85
SDR39U1-220ENST00000556548 NKRFO15226 690 aaKnown RBP eCLIP20.38■□□□□ 0.85
SDR39U1-220ENST00000556548 TNNT1P13805 278 aa20.38■□□□□ 0.85
SDR39U1-220ENST00000556548 ITGB5P18084 799 aa20.38■□□□□ 0.85
SDR39U1-220ENST00000556548 RPS6P62753 249 aaKnown RBP20.38■□□□□ 0.85
SDR39U1-220ENST00000556548 SUPT20HL1Q3ZLR7 823 aa20.38■□□□□ 0.85
SDR39U1-220ENST00000556548 NSMFQ6X4W1 530 aa20.38■□□□□ 0.85
SDR39U1-220ENST00000556548 MCF2L2Q86YR7 1114 aa20.38■□□□□ 0.85
SDR39U1-220ENST00000556548 TPH2Q8IWU9 490 aa20.38■□□□□ 0.85
SDR39U1-220ENST00000556548 PIGOQ8TEQ8 1089 aa20.38■□□□□ 0.85
SDR39U1-220ENST00000556548 TAAR1Q96RJ0 339 aa20.38■□□□□ 0.85
SDR39U1-220ENST00000556548 TMX1Q9H3N1 280 aa20.38■□□□□ 0.85
SDR39U1-220ENST00000556548 DOCK1Q14185 1865 aa20.38■□□□□ 0.85
SDR39U1-220ENST00000556548 USP2O75604 605 aaPredicted RBP20.38■□□□□ 0.85
SDR39U1-220ENST00000556548 EIF2AK2P19525 551 aaKnown RBP20.38■□□□□ 0.85
SDR39U1-220ENST00000556548 EHHADHQ08426 723 aa20.38■□□□□ 0.85
SDR39U1-220ENST00000556548 HERC4Q5GLZ8 1057 aaPredicted RBP20.38■□□□□ 0.85
SDR39U1-220ENST00000556548 SYTL5Q8TDW5 730 aaPredicted RBP20.38■□□□□ 0.85
SDR39U1-220ENST00000556548 SLC5A5Q92911 643 aa20.38■□□□□ 0.85
SDR39U1-220ENST00000556548 DYDC2Q96IM9 177 aa20.38■□□□□ 0.85
SDR39U1-220ENST00000556548 WDR11Q9BZH6 1224 aa20.38■□□□□ 0.85
SDR39U1-220ENST00000556548 AKR1B15C9JRZ8 316 aaPredicted RBP20.37■□□□□ 0.85
SDR39U1-220ENST00000556548 ZBTB39O15060 712 aa20.37■□□□□ 0.85
SDR39U1-220ENST00000556548 ERCC3P19447 782 aa20.37■□□□□ 0.85
SDR39U1-220ENST00000556548 CASP14P31944 242 aa20.37■□□□□ 0.85
SDR39U1-220ENST00000556548 CENPPQ6IPU0 288 aa20.37■□□□□ 0.85
SDR39U1-220ENST00000556548 TMEM139Q8IV31 216 aa20.37■□□□□ 0.85
SDR39U1-220ENST00000556548 CNOT6LQ96LI5 555 aaKnown RBP20.37■□□□□ 0.85
SDR39U1-220ENST00000556548 BAG1Q99933 345 aaPredicted RBP20.37■□□□□ 0.85
SDR39U1-220ENST00000556548 MXRA8Q9BRK3 442 aa20.37■□□□□ 0.85
SDR39U1-220ENST00000556548 BHMT2Q9H2M3 363 aa20.37■□□□□ 0.85
SDR39U1-220ENST00000556548 FAM26FQ5R3K3 315 aa20.37■□□□□ 0.85
SDR39U1-220ENST00000556548 C9orf131Q5VYM1 1079 aa20.37■□□□□ 0.85
SDR39U1-220ENST00000556548 CCDC65Q8IXS2 484 aa20.37■□□□□ 0.85
SDR39U1-220ENST00000556548 CCDC112Q8NEF3 446 aa20.37■□□□□ 0.85
SDR39U1-220ENST00000556548 ZNF592Q92610 1267 aa20.37■□□□□ 0.85
SDR39U1-220ENST00000556548 UNC45AQ9H3U1 944 aa20.37■□□□□ 0.85
SDR39U1-220ENST00000556548 ADARB2Q9NS39 739 aaKnown RBP20.37■□□□□ 0.85
SDR39U1-220ENST00000556548 POLR2AP24928 1970 aaKnown RBP20.37■□□□□ 0.85
SDR39U1-220ENST00000556548 B4DLN1 442 aa20.36■□□□□ 0.85
SDR39U1-220ENST00000556548 IPO5O00410 1097 aaKnown RBP20.36■□□□□ 0.85
SDR39U1-220ENST00000556548 EEF1GP26641 437 aaKnown RBP20.36■□□□□ 0.85
SDR39U1-220ENST00000556548 TEX2Q8IWB9 1127 aa20.36■□□□□ 0.85
SDR39U1-220ENST00000556548 NELFCDQ8IXH7 590 aa20.36■□□□□ 0.85
SDR39U1-220ENST00000556548 GUF1Q8N442 669 aaKnown RBP20.36■□□□□ 0.85
SDR39U1-220ENST00000556548 CNKSR2Q8WXI2 1034 aa20.36■□□□□ 0.85
SDR39U1-220ENST00000556548 TUBGCP2Q9BSJ2 902 aa20.36■□□□□ 0.85
SDR39U1-220ENST00000556548 GTPBP4Q9BZE4 634 aaKnown RBP20.36■□□□□ 0.85
SDR39U1-220ENST00000556548 BCAS3Q9H6U6 928 aa20.36■□□□□ 0.85
SDR39U1-220ENST00000556548 PPP2R3BQ9Y5P8 575 aa20.36■□□□□ 0.85
SDR39U1-220ENST00000556548 SLITRK3O94933 977 aa20.36■□□□□ 0.85
SDR39U1-220ENST00000556548 GYPCP04921 128 aa20.36■□□□□ 0.85
SDR39U1-220ENST00000556548 PPP1R2P41236 205 aa20.36■□□□□ 0.85
SDR39U1-220ENST00000556548 FXR1P51114 621 aaKnown RBP eCLIP20.36■□□□□ 0.85
SDR39U1-220ENST00000556548 PSMD2Q13200 908 aa20.36■□□□□ 0.85
SDR39U1-220ENST00000556548 COBLL1Q53SF7 1204 aa20.36■□□□□ 0.85
SDR39U1-220ENST00000556548 SYT2Q8N9I0 419 aaPredicted RBP20.36■□□□□ 0.85
SDR39U1-220ENST00000556548 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.36■□□□□ 0.85
SDR39U1-220ENST00000556548 SBF1O95248 1867 aa20.35■□□□□ 0.85
SDR39U1-220ENST00000556548 MYCLP12524 364 aaPredicted RBP20.35■□□□□ 0.85
SDR39U1-220ENST00000556548 MTIF2P46199 727 aaKnown RBP20.35■□□□□ 0.85
SDR39U1-220ENST00000556548 SNRNP48Q6IEG0 339 aaKnown RBP20.35■□□□□ 0.85
SDR39U1-220ENST00000556548 RNF207Q6ZRF8 634 aa20.35■□□□□ 0.85
SDR39U1-220ENST00000556548 MTERF4Q7Z6M4 381 aaKnown RBP20.35■□□□□ 0.85
SDR39U1-220ENST00000556548 MYOCDQ8IZQ8 938 aa20.35■□□□□ 0.85
SDR39U1-220ENST00000556548 NOC3LQ8WTT2 800 aaKnown RBP20.35■□□□□ 0.85
SDR39U1-220ENST00000556548 DCPSQ96C86 337 aaKnown RBP20.35■□□□□ 0.85
SDR39U1-220ENST00000556548 HSD17B14Q9BPX1 270 aa20.35■□□□□ 0.85
SDR39U1-220ENST00000556548 POLR3CQ9BUI4 534 aaPredicted RBP20.35■□□□□ 0.85
SDR39U1-220ENST00000556548 KCNH7Q9NS40 1196 aa20.35■□□□□ 0.85
SDR39U1-220ENST00000556548 RNF146Q9NTX7 359 aa20.35■□□□□ 0.85
SDR39U1-220ENST00000556548 RNF225M0QZC1 329 aaPredicted RBP20.35■□□□□ 0.85
SDR39U1-220ENST00000556548 SLC26A4O43511 780 aa20.35■□□□□ 0.85
SDR39U1-220ENST00000556548 MRPS9P82933 396 aaKnown RBP20.35■□□□□ 0.85
SDR39U1-220ENST00000556548 SETQ01105 290 aaPredicted RBP20.35■□□□□ 0.85
SDR39U1-220ENST00000556548 PPP2R5CQ13362 524 aa20.35■□□□□ 0.85
SDR39U1-220ENST00000556548 VGLL4Q14135 290 aa20.35■□□□□ 0.85
SDR39U1-220ENST00000556548 GIT2Q14161 759 aa20.35■□□□□ 0.85
SDR39U1-220ENST00000556548 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.35■□□□□ 0.85
SDR39U1-220ENST00000556548 PPP1R13BQ96KQ4 1090 aa20.35■□□□□ 0.85
SDR39U1-220ENST00000556548 REEP2Q9BRK0 252 aa20.35■□□□□ 0.85
SDR39U1-220ENST00000556548 RUSC1Q9BVN2 902 aa20.35■□□□□ 0.85
SDR39U1-220ENST00000556548 TMOD4Q9NZQ9 345 aa20.35■□□□□ 0.85
SDR39U1-220ENST00000556548 RABGAP1Q9Y3P9 1069 aa20.35■□□□□ 0.85
SDR39U1-220ENST00000556548 AFG3L2Q9Y4W6 797 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms