RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 MCF2L2Q86YR7 1114 aa8.05□□□□□ -1.12
VRK1-203ENST00000555067 DNERQ8NFT8 737 aa8.05□□□□□ -1.12
VRK1-203ENST00000555067 KLC2Q9H0B6 622 aa8.05□□□□□ -1.12
VRK1-203ENST00000555067 CLDND1Q9NY35 253 aa8.05□□□□□ -1.12
VRK1-203ENST00000555067 DTLQ9NZJ0 730 aa8.05□□□□□ -1.12
VRK1-203ENST00000555067 PCDHB4Q9Y5E5 795 aa8.05□□□□□ -1.12
VRK1-203ENST00000555067 LAMTOR5O43504 91 aa8.04□□□□□ -1.12
VRK1-203ENST00000555067 B4GALT3O60512 393 aa8.04□□□□□ -1.12
VRK1-203ENST00000555067 MAFKO60675 156 aa8.04□□□□□ -1.12
VRK1-203ENST00000555067 DGKIO75912 1065 aa8.04□□□□□ -1.12
VRK1-203ENST00000555067 LCP1P13796 627 aa8.04□□□□□ -1.12
VRK1-203ENST00000555067 DNAJA1P31689 397 aaKnown RBP8.04□□□□□ -1.12
VRK1-203ENST00000555067 SURF1Q15526 300 aa8.04□□□□□ -1.12
VRK1-203ENST00000555067 DENND5AQ6IQ26 1287 aa8.04□□□□□ -1.12
VRK1-203ENST00000555067 PHOSPHO1Q8TCT1 267 aa8.04□□□□□ -1.12
VRK1-203ENST00000555067 CDK5RAP1Q96SZ6 601 aaKnown RBP8.04□□□□□ -1.12
VRK1-203ENST00000555067 VPS11Q9H270 941 aa8.04□□□□□ -1.12
VRK1-203ENST00000555067 TCRBV5S2A0A599 114 aa8.03□□□□□ -1.12
VRK1-203ENST00000555067 C9orf118A6NHY6 69 aa8.03□□□□□ -1.12
VRK1-203ENST00000555067 TADA3O75528 432 aa8.03□□□□□ -1.12
VRK1-203ENST00000555067 HNRNPLLQ8WVV9 542 aaKnown RBP8.03□□□□□ -1.12
VRK1-203ENST00000555067 TOE1Q96GM8 510 aaKnown RBP8.03□□□□□ -1.12
VRK1-203ENST00000555067 A0A1W2PQU0 124 aa8.02□□□□□ -1.13
VRK1-203ENST00000555067 ADAM9Q13443 819 aa8.02□□□□□ -1.13
VRK1-203ENST00000555067 DDR2Q16832 855 aa8.02□□□□□ -1.13
VRK1-203ENST00000555067 CYP4F22Q6NT55 531 aa8.02□□□□□ -1.13
VRK1-203ENST00000555067 USP51Q70EK9 711 aa8.02□□□□□ -1.13
VRK1-203ENST00000555067 STK32CQ86UX6 486 aa8.02□□□□□ -1.13
VRK1-203ENST00000555067 SLC43A3Q8NBI5 491 aa8.02□□□□□ -1.13
VRK1-203ENST00000555067 ARRDC4Q8NCT1 418 aa8.02□□□□□ -1.13
VRK1-203ENST00000555067 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.02□□□□□ -1.13
VRK1-203ENST00000555067 SGSM3Q96HU1 749 aa8.02□□□□□ -1.13
VRK1-203ENST00000555067 LCORQ96JN0 433 aaPredicted RBP8.02□□□□□ -1.13
VRK1-203ENST00000555067 WRNIP1Q96S55 665 aa8.02□□□□□ -1.13
VRK1-203ENST00000555067 GPR27Q9NS67 375 aa8.02□□□□□ -1.13
VRK1-203ENST00000555067 GPR42O15529 346 aa8.01□□□□□ -1.13
VRK1-203ENST00000555067 CYP7B1O75881 506 aa8.01□□□□□ -1.13
VRK1-203ENST00000555067 HMGB1P09429 215 aaKnown RBP8.01□□□□□ -1.13
VRK1-203ENST00000555067 GRIA2P42262 883 aa8.01□□□□□ -1.13
VRK1-203ENST00000555067 RSPO2Q6UXX9 243 aaPredicted RBP8.01□□□□□ -1.13
VRK1-203ENST00000555067 GMLQ99445 158 aa8.01□□□□□ -1.13
VRK1-203ENST00000555067 IER2Q9BTL4 223 aa8.01□□□□□ -1.13
VRK1-203ENST00000555067 SMOC1Q9H4F8 434 aa8.01□□□□□ -1.13
VRK1-203ENST00000555067 MYOTQ9UBF9 498 aa8.01□□□□□ -1.13
VRK1-203ENST00000555067 IQCA1LA6NCM1 817 aa8□□□□□ -1.13
VRK1-203ENST00000555067 KRIT1O00522 736 aa8□□□□□ -1.13
VRK1-203ENST00000555067 DDX3XO00571 662 aaKnown RBP eCLIP8□□□□□ -1.13
VRK1-203ENST00000555067 ZNF28P17035 718 aa8□□□□□ -1.13
VRK1-203ENST00000555067 HSP90AA2PQ14568 343 aaPredicted RBP8□□□□□ -1.13
VRK1-203ENST00000555067 TEPPQ6URK8 271 aa8□□□□□ -1.13
VRK1-203ENST00000555067 ANKS3Q6ZW76 656 aa8□□□□□ -1.13
VRK1-203ENST00000555067 CELF2-AS1Q8N7Q2 184 aa8□□□□□ -1.13
VRK1-203ENST00000555067 MBD6Q96DN6 1003 aa8□□□□□ -1.13
VRK1-203ENST00000555067 CLIC6Q96NY7 704 aa8□□□□□ -1.13
VRK1-203ENST00000555067 TMEM209Q96SK2 561 aa8□□□□□ -1.13
VRK1-203ENST00000555067 AMHP03971 560 aa7.99□□□□□ -1.13
VRK1-203ENST00000555067 HSP90B1P14625 803 aaKnown RBP7.99□□□□□ -1.13
VRK1-203ENST00000555067 R3HDM1Q15032 1099 aaKnown RBP7.99□□□□□ -1.13
VRK1-203ENST00000555067 PRAMEF18Q5VWM3 479 aa7.99□□□□□ -1.13
VRK1-203ENST00000555067 PLEKHH3Q7Z736 793 aa7.99□□□□□ -1.13
VRK1-203ENST00000555067 PUS7Q96PZ0 661 aaKnown RBP7.99□□□□□ -1.13
VRK1-203ENST00000555067 AARSD1Q9BTE6 412 aaKnown RBP7.99□□□□□ -1.13
VRK1-203ENST00000555067 ST7Q9NRC1 585 aa7.99□□□□□ -1.13
VRK1-203ENST00000555067 DLX3O60479 287 aa7.98□□□□□ -1.13
VRK1-203ENST00000555067 USP53Q70EK8 1073 aa7.98□□□□□ -1.13
VRK1-203ENST00000555067 TRIM48Q8IWZ4 208 aa7.98□□□□□ -1.13
VRK1-203ENST00000555067 ST13P5Q8NFI4 369 aaPredicted RBP7.98□□□□□ -1.13
VRK1-203ENST00000555067 TTLL11Q8NHH1 800 aa7.98□□□□□ -1.13
VRK1-203ENST00000555067 CDIP1Q9H305 208 aa7.98□□□□□ -1.13
VRK1-203ENST00000555067 HSPBP1Q9NZL4 362 aa7.98□□□□□ -1.13
VRK1-203ENST00000555067 KLF4O43474 513 aa7.97□□□□□ -1.13
VRK1-203ENST00000555067 LRG1P02750 347 aa7.97□□□□□ -1.13
VRK1-203ENST00000555067 KLF10Q13118 480 aa7.97□□□□□ -1.13
VRK1-203ENST00000555067 ZSWIM3Q96MP5 696 aa7.97□□□□□ -1.13
VRK1-203ENST00000555067 WWC2-AS2Q96NR7 200 aa7.97□□□□□ -1.13
VRK1-203ENST00000555067 PHF20Q9BVI0 1012 aa7.97□□□□□ -1.13
VRK1-203ENST00000555067 L2HGDHQ9H9P8 463 aa7.97□□□□□ -1.13
VRK1-203ENST00000555067 SLC6A20Q9NP91 592 aa7.97□□□□□ -1.13
VRK1-203ENST00000555067 IGSF5Q9NSI5 407 aa7.97□□□□□ -1.13
VRK1-203ENST00000555067 ASH2LQ9UBL3 628 aa7.97□□□□□ -1.13
VRK1-203ENST00000555067 CYP1A1P04798 512 aaPredicted RBP7.96□□□□□ -1.14
VRK1-203ENST00000555067 FGFR1P11362 822 aa7.96□□□□□ -1.14
VRK1-203ENST00000555067 EPHB4P54760 987 aa7.96□□□□□ -1.14
VRK1-203ENST00000555067 PKN3Q6P5Z2 889 aa7.96□□□□□ -1.14
VRK1-203ENST00000555067 DCAF4Q8WV16 495 aa7.96□□□□□ -1.14
VRK1-203ENST00000555067 ZFYVE21Q9BQ24 234 aa7.96□□□□□ -1.14
VRK1-203ENST00000555067 NPEPPSL1A6NEC2 478 aa7.95□□□□□ -1.14
VRK1-203ENST00000555067 KIZQ2M2Z5 673 aa7.95□□□□□ -1.14
VRK1-203ENST00000555067 CIR1Q86X95 450 aaPredicted RBP7.95□□□□□ -1.14
VRK1-203ENST00000555067 YTHDC1Q96MU7 727 aaKnown RBP7.95□□□□□ -1.14
VRK1-203ENST00000555067 TMEM168Q9H0V1 697 aa7.95□□□□□ -1.14
VRK1-203ENST00000555067 NUB1Q9Y5A7 615 aa7.95□□□□□ -1.14
VRK1-203ENST00000555067 PATE3B3GLJ2 98 aa7.94□□□□□ -1.14
VRK1-203ENST00000555067 MSCO60682 206 aa7.94□□□□□ -1.14
VRK1-203ENST00000555067 CDK11BP21127 795 aaKnown RBP7.94□□□□□ -1.14
VRK1-203ENST00000555067 GRK2P25098 689 aa7.94□□□□□ -1.14
VRK1-203ENST00000555067 IL13P35225 146 aa7.94□□□□□ -1.14
VRK1-203ENST00000555067 GRK3P35626 688 aa7.94□□□□□ -1.14
VRK1-203ENST00000555067 SELENOPP49908 381 aa7.94□□□□□ -1.14
VRK1-203ENST00000555067 ZNF585AQ6P3V2 769 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms