RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 SYT2Q8N9I0 419 aaPredicted RBP23.57■■□□□ 1.36
ARHGEF40-204ENST00000555038 EEF2KMTQ96G04 330 aa23.57■■□□□ 1.36
ARHGEF40-204ENST00000555038 POLR3CQ9BUI4 534 aaPredicted RBP23.57■■□□□ 1.36
ARHGEF40-204ENST00000555038 NHEJ1Q9H9Q4 299 aaPredicted RBP23.57■■□□□ 1.36
ARHGEF40-204ENST00000555038 CBX1P83916 185 aa23.56■■□□□ 1.36
ARHGEF40-204ENST00000555038 EDRF1Q3B7T1 1238 aa23.56■■□□□ 1.36
ARHGEF40-204ENST00000555038 HERC4Q5GLZ8 1057 aaPredicted RBP23.56■■□□□ 1.36
ARHGEF40-204ENST00000555038 TMCO3Q6UWJ1 677 aa23.56■■□□□ 1.36
ARHGEF40-204ENST00000555038 FAM160B2Q86V87 743 aa23.56■■□□□ 1.36
ARHGEF40-204ENST00000555038 CATSPER3Q86XQ3 398 aa23.56■■□□□ 1.36
ARHGEF40-204ENST00000555038 AGBL3Q8NEM8 1001 aa23.56■■□□□ 1.36
ARHGEF40-204ENST00000555038 TSGA10Q9BZW7 698 aa23.56■■□□□ 1.36
ARHGEF40-204ENST00000555038 EHMT1Q9H9B1 1298 aa23.56■■□□□ 1.36
ARHGEF40-204ENST00000555038 CNTNAP1P78357 1384 aa23.56■■□□□ 1.36
ARHGEF40-204ENST00000555038 KIF13BQ9NQT8 1826 aa23.56■■□□□ 1.36
ARHGEF40-204ENST00000555038 FAM86B1E9PN63 330 aa23.55■■□□□ 1.36
ARHGEF40-204ENST00000555038 KRT18P05783 430 aaKnown RBP23.55■■□□□ 1.36
ARHGEF40-204ENST00000555038 FAM86B2P0C5J1 330 aa23.55■■□□□ 1.36
ARHGEF40-204ENST00000555038 KLK7P49862 253 aa23.55■■□□□ 1.36
ARHGEF40-204ENST00000555038 CHMP4BP1P59074 171 aa23.55■■□□□ 1.36
ARHGEF40-204ENST00000555038 HERVK_113P62684 666 aa23.55■■□□□ 1.36
ARHGEF40-204ENST00000555038 LRRC41Q15345 812 aa23.55■■□□□ 1.36
ARHGEF40-204ENST00000555038 UBE2Q2Q8WVN8 375 aa23.55■■□□□ 1.36
ARHGEF40-204ENST00000555038 NUCKS1Q9H1E3 243 aaKnown RBP23.55■■□□□ 1.36
ARHGEF40-204ENST00000555038 RANBP17Q9H2T7 1088 aaKnown RBP23.55■■□□□ 1.36
ARHGEF40-204ENST00000555038 SPDYE4A6NLX3 237 aa23.55■■□□□ 1.36
ARHGEF40-204ENST00000555038 MSH4O15457 936 aa23.55■■□□□ 1.36
ARHGEF40-204ENST00000555038 STAT3P40763 770 aa23.55■■□□□ 1.36
ARHGEF40-204ENST00000555038 SNAP25P60880 206 aa23.55■■□□□ 1.36
ARHGEF40-204ENST00000555038 EN1Q05925 392 aaPredicted RBP23.55■■□□□ 1.36
ARHGEF40-204ENST00000555038 NCAPH2Q6IBW4 605 aa23.55■■□□□ 1.36
ARHGEF40-204ENST00000555038 KIAA1328Q86T90 577 aa23.55■■□□□ 1.36
ARHGEF40-204ENST00000555038 KRT222Q8N1A0 295 aa23.55■■□□□ 1.36
ARHGEF40-204ENST00000555038 EMILIN3Q9NT22 766 aa23.55■■□□□ 1.36
ARHGEF40-204ENST00000555038 VAV3Q9UKW4 847 aa23.55■■□□□ 1.36
ARHGEF40-204ENST00000555038 FAM184BQ9ULE4 1060 aa23.55■■□□□ 1.36
ARHGEF40-204ENST00000555038 TRAF5O00463 557 aa23.54■■□□□ 1.36
ARHGEF40-204ENST00000555038 SPATA31C1P0DKV0 1188 aa23.54■■□□□ 1.36
ARHGEF40-204ENST00000555038 ZNF76P36508 570 aa23.54■■□□□ 1.36
ARHGEF40-204ENST00000555038 TEX35Q5T0J7 233 aa23.54■■□□□ 1.36
ARHGEF40-204ENST00000555038 VCPKMTQ9H867 229 aa23.54■■□□□ 1.36
ARHGEF40-204ENST00000555038 ZNF446Q9NWS9 450 aa23.54■■□□□ 1.36
ARHGEF40-204ENST00000555038 CLRN2A0PK11 232 aa23.53■■□□□ 1.36
ARHGEF40-204ENST00000555038 POTEFA5A3E0 1075 aa23.53■■□□□ 1.36
ARHGEF40-204ENST00000555038 POTEIP0CG38 1075 aa23.53■■□□□ 1.36
ARHGEF40-204ENST00000555038 ECE1P42892 770 aa23.53■■□□□ 1.36
ARHGEF40-204ENST00000555038 CCDC40Q4G0X9 1142 aa23.53■■□□□ 1.36
ARHGEF40-204ENST00000555038 ARSHQ5FYA8 562 aa23.53■■□□□ 1.36
ARHGEF40-204ENST00000555038 CCDC122Q5T0U0 273 aa23.53■■□□□ 1.36
ARHGEF40-204ENST00000555038 POTEGQ6S5H5 508 aa23.53■■□□□ 1.36
ARHGEF40-204ENST00000555038 POTEEQ6S8J3 1075 aa23.53■■□□□ 1.36
ARHGEF40-204ENST00000555038 GLIS3Q8NEA6 775 aa23.53■■□□□ 1.36
ARHGEF40-204ENST00000555038 SCFD1Q8WVM8 642 aa23.53■■□□□ 1.36
ARHGEF40-204ENST00000555038 JAKMIP2Q96AA8 810 aa23.53■■□□□ 1.36
ARHGEF40-204ENST00000555038 CCDC42Q96M95 316 aa23.53■■□□□ 1.36
ARHGEF40-204ENST00000555038 KCTD10Q9H3F6 313 aa23.53■■□□□ 1.36
ARHGEF40-204ENST00000555038 MRPL11Q9Y3B7 192 aaKnown RBP23.53■■□□□ 1.36
ARHGEF40-204ENST00000555038 GCOM1H8Y6P7 765 aaPredicted RBP23.52■■□□□ 1.36
ARHGEF40-204ENST00000555038 RAD17O75943 681 aa23.52■■□□□ 1.36
ARHGEF40-204ENST00000555038 ZRANB2O95218 330 aaKnown RBP eCLIP23.52■■□□□ 1.36
ARHGEF40-204ENST00000555038 POLR2MP0CAP2 368 aa23.52■■□□□ 1.36
ARHGEF40-204ENST00000555038 MUTP22033 750 aa23.52■■□□□ 1.36
ARHGEF40-204ENST00000555038 AMPD2Q01433 879 aa23.52■■□□□ 1.36
ARHGEF40-204ENST00000555038 SPA17Q15506 151 aa23.52■■□□□ 1.36
ARHGEF40-204ENST00000555038 SPICE1Q8N0Z3 855 aa23.52■■□□□ 1.36
ARHGEF40-204ENST00000555038 NEK11Q8NG66 645 aa23.52■■□□□ 1.36
ARHGEF40-204ENST00000555038 GUCA1BQ9UMX6 200 aa23.52■■□□□ 1.36
ARHGEF40-204ENST00000555038 LCA5LO95447 670 aa23.52■■□□□ 1.36
ARHGEF40-204ENST00000555038 TUBBP07437 444 aa23.52■■□□□ 1.36
ARHGEF40-204ENST00000555038 VAV2P52735 878 aa23.52■■□□□ 1.36
ARHGEF40-204ENST00000555038 GIT2Q14161 759 aa23.52■■□□□ 1.36
ARHGEF40-204ENST00000555038 FAM83BQ5T0W9 1011 aa23.52■■□□□ 1.36
ARHGEF40-204ENST00000555038 ILDR2Q71H61 639 aa23.52■■□□□ 1.36
ARHGEF40-204ENST00000555038 TXLNBQ8N3L3 684 aa23.52■■□□□ 1.36
ARHGEF40-204ENST00000555038 ACER1Q8TDN7 264 aa23.52■■□□□ 1.36
ARHGEF40-204ENST00000555038 MMRN2Q9H8L6 949 aa23.52■■□□□ 1.36
ARHGEF40-204ENST00000555038 TUFT1Q9NNX1 390 aa23.52■■□□□ 1.36
ARHGEF40-204ENST00000555038 ZNRF3Q9ULT6 936 aa23.52■■□□□ 1.36
ARHGEF40-204ENST00000555038 MYO6Q9UM54 1294 aa23.52■■□□□ 1.36
ARHGEF40-204ENST00000555038 IGLV3-22A0A075B6J6 115 aa23.51■■□□□ 1.35
ARHGEF40-204ENST00000555038 ABL1P00519 1130 aa23.51■■□□□ 1.35
ARHGEF40-204ENST00000555038 MAP3K10Q02779 954 aa23.51■■□□□ 1.35
ARHGEF40-204ENST00000555038 TRIM59Q8IWR1 403 aa23.51■■□□□ 1.35
ARHGEF40-204ENST00000555038 SLC16A10Q8TF71 515 aa23.51■■□□□ 1.35
ARHGEF40-204ENST00000555038 SYN2Q92777 582 aaPredicted RBP23.51■■□□□ 1.35
ARHGEF40-204ENST00000555038 PURBQ96QR8 312 aaKnown RBP23.51■■□□□ 1.35
ARHGEF40-204ENST00000555038 DEFB129Q9H1M3 183 aa23.51■■□□□ 1.35
ARHGEF40-204ENST00000555038 FEM1BQ9UK73 627 aa23.51■■□□□ 1.35
ARHGEF40-204ENST00000555038 RABGAP1Q9Y3P9 1069 aa23.51■■□□□ 1.35
ARHGEF40-204ENST00000555038 ANO9A1A5B4 782 aa23.5■■□□□ 1.35
ARHGEF40-204ENST00000555038 CETN3O15182 167 aa23.5■■□□□ 1.35
ARHGEF40-204ENST00000555038 NKRFO15226 690 aaKnown RBP eCLIP23.5■■□□□ 1.355e-9■■■□□ 16.6
ARHGEF40-204ENST00000555038 EYA4O95677 639 aa23.5■■□□□ 1.35
ARHGEF40-204ENST00000555038 HOXA13P31271 388 aaPredicted RBP23.5■■□□□ 1.35
ARHGEF40-204ENST00000555038 FAM207AQ9NSI2 230 aaPredicted RBP23.5■■□□□ 1.35
ARHGEF40-204ENST00000555038 TRAF3IP3Q9Y228 551 aa23.5■■□□□ 1.35
ARHGEF40-204ENST00000555038 USO1O60763 962 aaKnown RBP23.5■■□□□ 1.35
ARHGEF40-204ENST00000555038 CAP2P40123 477 aa23.5■■□□□ 1.35
ARHGEF40-204ENST00000555038 KIF5AQ12840 1032 aa23.5■■□□□ 1.35
ARHGEF40-204ENST00000555038 BRD3Q15059 726 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms