RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 FBXO28Q9NVF7 368 aa20.71■□□□□ 0.91
VDR-204ENST00000547065 NPHP3-ACAD11A0A0J9YXS1 232 aa20.7■□□□□ 0.9
VDR-204ENST00000547065 WDR46O15213 610 aaKnown RBP20.7■□□□□ 0.9
VDR-204ENST00000547065 FKBP3Q00688 224 aaKnown RBP20.7■□□□□ 0.9
VDR-204ENST00000547065 ZCWPW2Q504Y3 356 aa20.7■□□□□ 0.9
VDR-204ENST00000547065 LRRC55Q6ZSA7 311 aa20.7■□□□□ 0.9
VDR-204ENST00000547065 PRPF38AQ8NAV1 312 aaKnown RBP20.7■□□□□ 0.9
VDR-204ENST00000547065 GLIS3Q8NEA6 775 aa20.7■□□□□ 0.9
VDR-204ENST00000547065 FBXO41Q8TF61 875 aa20.7■□□□□ 0.9
VDR-204ENST00000547065 EIF2AK1Q9BQI3 630 aaKnown RBP20.7■□□□□ 0.9
VDR-204ENST00000547065 TTYH3Q9C0H2 523 aa20.7■□□□□ 0.9
VDR-204ENST00000547065 RABGAP1Q9Y3P9 1069 aa20.7■□□□□ 0.9
VDR-204ENST00000547065 LTBP3Q9NS15 1303 aa20.7■□□□□ 0.9
VDR-204ENST00000547065 A0A1W2PQJ5 194 aa20.69■□□□□ 0.9
VDR-204ENST00000547065 RASSF10A6NK89 507 aa20.69■□□□□ 0.9
VDR-204ENST00000547065 CTNND1O60716 968 aaKnown RBP20.69■□□□□ 0.9
VDR-204ENST00000547065 ICAM1P05362 532 aa20.69■□□□□ 0.9
VDR-204ENST00000547065 INPP5BP32019 993 aa20.69■□□□□ 0.9
VDR-204ENST00000547065 PSMC6P62333 389 aa20.69■□□□□ 0.9
VDR-204ENST00000547065 ZBED6P86452 979 aa20.69■□□□□ 0.9
VDR-204ENST00000547065 SLC5A5Q92911 643 aa20.69■□□□□ 0.9
VDR-204ENST00000547065 PCMTD1Q96MG8 357 aaPredicted RBP20.69■□□□□ 0.9
VDR-204ENST00000547065 CEP63Q96MT8 703 aa20.69■□□□□ 0.9
VDR-204ENST00000547065 WDR18Q9BV38 432 aa20.69■□□□□ 0.9
VDR-204ENST00000547065 KIAA1683Q9H0B3 1180 aa20.69■□□□□ 0.9
VDR-204ENST00000547065 NDST4Q9H3R1 872 aa20.69■□□□□ 0.9
VDR-204ENST00000547065 PPP1R1BQ9UD71 204 aaPredicted RBP20.69■□□□□ 0.9
VDR-204ENST00000547065 CD2APQ9Y5K6 639 aa20.69■□□□□ 0.9
VDR-204ENST00000547065 MEIS1O00470 390 aa20.69■□□□□ 0.9
VDR-204ENST00000547065 URI1O94763 535 aaPredicted RBP20.69■□□□□ 0.9
VDR-204ENST00000547065 TRIM21P19474 475 aaKnown RBP20.69■□□□□ 0.9
VDR-204ENST00000547065 GMPSP49915 693 aaPredicted RBP20.69■□□□□ 0.9
VDR-204ENST00000547065 GIT2Q14161 759 aa20.69■□□□□ 0.9
VDR-204ENST00000547065 CEP55Q53EZ4 464 aa20.69■□□□□ 0.9
VDR-204ENST00000547065 SAMD1Q6SPF0 538 aaPredicted RBP20.69■□□□□ 0.9
VDR-204ENST00000547065 OTOP1Q7RTM1 612 aa20.69■□□□□ 0.9
VDR-204ENST00000547065 CCDC84Q86UT8 332 aaPredicted RBP20.69■□□□□ 0.9
VDR-204ENST00000547065 ZNF397Q8NF99 534 aaPredicted RBP20.69■□□□□ 0.9
VDR-204ENST00000547065 WDR24Q96S15 920 aa20.69■□□□□ 0.9
VDR-204ENST00000547065 TUFT1Q9NNX1 390 aa20.69■□□□□ 0.9
VDR-204ENST00000547065 EMILIN3Q9NT22 766 aa20.69■□□□□ 0.9
VDR-204ENST00000547065 ZNHIT6Q9NWK9 470 aaKnown RBP20.69■□□□□ 0.9
VDR-204ENST00000547065 EPN1Q9Y6I3 576 aaPredicted RBP20.69■□□□□ 0.9
VDR-204ENST00000547065 FER1L6Q2WGJ9 1857 aa20.69■□□□□ 0.9
VDR-204ENST00000547065 KIF5CO60282 957 aa20.68■□□□□ 0.9
VDR-204ENST00000547065 PSMD10O75832 226 aa20.68■□□□□ 0.9
VDR-204ENST00000547065 EYA4O95677 639 aa20.68■□□□□ 0.9
VDR-204ENST00000547065 GNA14O95837 355 aa20.68■□□□□ 0.9
VDR-204ENST00000547065 PABPC4Q13310 644 aaKnown RBP eCLIP20.68■□□□□ 0.9
VDR-204ENST00000547065 PPP2R5CQ13362 524 aa20.68■□□□□ 0.9
VDR-204ENST00000547065 MEA1Q16626 185 aa20.68■□□□□ 0.9
VDR-204ENST00000547065 LRCH2Q5VUJ6 765 aa20.68■□□□□ 0.9
VDR-204ENST00000547065 MICALL2Q8IY33 904 aa20.68■□□□□ 0.9
VDR-204ENST00000547065 CHP1Q99653 195 aa20.68■□□□□ 0.9
VDR-204ENST00000547065 HSD17B14Q9BPX1 270 aa20.68■□□□□ 0.9
VDR-204ENST00000547065 SLF1Q9BQI6 1058 aa20.68■□□□□ 0.9
VDR-204ENST00000547065 TBC1D7Q9P0N9 293 aa20.68■□□□□ 0.9
VDR-204ENST00000547065 CNOT7Q9UIV1 285 aaKnown RBP20.68■□□□□ 0.9
VDR-204ENST00000547065 CCPG1Q9ULG6 757 aa20.68■□□□□ 0.9
VDR-204ENST00000547065 BCS1LQ9Y276 419 aa20.68■□□□□ 0.9
VDR-204ENST00000547065 EML1O00423 815 aa20.67■□□□□ 0.9
VDR-204ENST00000547065 TRAF5O00463 557 aa20.67■□□□□ 0.9
VDR-204ENST00000547065 FANCGO15287 622 aa20.67■□□□□ 0.9
VDR-204ENST00000547065 EGFRP00533 1210 aa20.67■□□□□ 0.9
VDR-204ENST00000547065 HSD17B4P51659 736 aa20.67■□□□□ 0.9
VDR-204ENST00000547065 LZTFL1Q9NQ48 299 aa20.67■□□□□ 0.9
VDR-204ENST00000547065 SCAF8Q9UPN6 1271 aaKnown RBP20.67■□□□□ 0.9
VDR-204ENST00000547065 COL4A3BPQ9Y5P4 624 aa20.67■□□□□ 0.9
VDR-204ENST00000547065 FZD9O00144 591 aa20.67■□□□□ 0.9
VDR-204ENST00000547065 MUTP22033 750 aa20.67■□□□□ 0.9
VDR-204ENST00000547065 SETQ01105 290 aaPredicted RBP20.67■□□□□ 0.9
VDR-204ENST00000547065 NAA30Q147X3 362 aaPredicted RBP20.67■□□□□ 0.9
VDR-204ENST00000547065 PPP4R3CPQ6ZMV5 832 aa20.67■□□□□ 0.9
VDR-204ENST00000547065 MCF2L2Q86YR7 1114 aa20.67■□□□□ 0.9
VDR-204ENST00000547065 PDCL2Q8N4E4 241 aa20.67■□□□□ 0.9
VDR-204ENST00000547065 ACRBPQ8NEB7 543 aa20.67■□□□□ 0.9
VDR-204ENST00000547065 SCFD1Q8WVM8 642 aa20.67■□□□□ 0.9
VDR-204ENST00000547065 AGBL1Q96MI9 1066 aa20.67■□□□□ 0.9
VDR-204ENST00000547065 ZNF536O15090 1300 aa20.66■□□□□ 0.9
VDR-204ENST00000547065 NDUFA10O95299 355 aa20.66■□□□□ 0.9
VDR-204ENST00000547065 KLK7P49862 253 aa20.66■□□□□ 0.9
VDR-204ENST00000547065 MAP3K9P80192 1104 aa20.66■□□□□ 0.9
VDR-204ENST00000547065 CACNB1Q02641 598 aaPredicted RBP20.66■□□□□ 0.9
VDR-204ENST00000547065 WDR59Q6PJI9 974 aa20.66■□□□□ 0.9
VDR-204ENST00000547065 WDR11Q9BZH6 1224 aa20.66■□□□□ 0.9
VDR-204ENST00000547065 KCTD10Q9H3F6 313 aa20.66■□□□□ 0.9
VDR-204ENST00000547065 ZHX3Q9H4I2 956 aa20.66■□□□□ 0.9
VDR-204ENST00000547065 AGPAT5Q9NUQ2 364 aa20.66■□□□□ 0.9
VDR-204ENST00000547065 HACL1Q9UJ83 578 aa20.66■□□□□ 0.9
VDR-204ENST00000547065 SIK3Q9Y2K2 1263 aa20.66■□□□□ 0.9
VDR-204ENST00000547065 GAS7O60861 476 aa20.65■□□□□ 0.9
VDR-204ENST00000547065 PRELPP51888 382 aa20.65■□□□□ 0.9
VDR-204ENST00000547065 CDK17Q00537 523 aa20.65■□□□□ 0.9
VDR-204ENST00000547065 CYP4A11Q02928 519 aa20.65■□□□□ 0.9
VDR-204ENST00000547065 RAD51AP2Q09MP3 1159 aa20.65■□□□□ 0.9
VDR-204ENST00000547065 ARHGAP29Q52LW3 1261 aa20.65■□□□□ 0.9
VDR-204ENST00000547065 SAMD7Q7Z3H4 446 aa20.65■□□□□ 0.9
VDR-204ENST00000547065 KRT26Q7Z3Y9 468 aa20.65■□□□□ 0.9
VDR-204ENST00000547065 SAMD3Q8N6K7 520 aa20.65■□□□□ 0.9
VDR-204ENST00000547065 FGFBP2Q9BYJ0 223 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms