RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 XAB2Q9HCS7 855 aaKnown RBP13.86□□□□□ -0.19
PTCH1-212ENST00000546744 NEURL1BA8MQ27 555 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 MYO1FO00160 1098 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 PYGBP11216 843 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 BFSP1Q12934 665 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 ARMCX5Q6P1M9 558 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 WDR93Q6P2C0 686 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 PPCSQ9HAB8 311 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 HAUS2Q9NVX0 235 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 ARL2BPQ9Y2Y0 163 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 ADGRB2O60241 1585 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 RPAP1Q9BWH6 1393 aaPredicted RBP13.85□□□□□ -0.19
PTCH1-212ENST00000546744 PCYT1AP49585 367 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 SLC12A2P55011 1212 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 ZNF473Q8WTR7 871 aaKnown RBP13.85□□□□□ -0.19
PTCH1-212ENST00000546744 KIF2CQ99661 725 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 NDST4Q9H3R1 872 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 ZNF148Q9UQR1 794 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 USP27XA6NNY8 438 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 TTI1O43156 1089 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 MOCS3O95396 460 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 GAP43P17677 238 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 DDIT3P35638 169 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 PPARAQ07869 468 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 POLA2Q14181 598 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 NELFCDQ8IXH7 590 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 ZSCAN10Q96SZ4 725 aaPredicted RBP13.85□□□□□ -0.19
PTCH1-212ENST00000546744 ATG3Q9NT62 314 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 PANK4Q9NVE7 773 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 IFNB1P01574 187 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 AFPP02771 609 aaKnown RBP13.85□□□□□ -0.19
PTCH1-212ENST00000546744 MSH2P43246 934 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 RANBP1P43487 201 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 OCA2Q04671 838 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 SGO2Q562F6 1265 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 RASGRP2Q7LDG7 609 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 MYCT1Q8N699 235 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 OSBPL1AQ9BXW6 950 aa13.85□□□□□ -0.19
PTCH1-212ENST00000546744 GGPS1O95749 300 aa13.84□□□□□ -0.19
PTCH1-212ENST00000546744 AGTP01019 485 aa13.84□□□□□ -0.19
PTCH1-212ENST00000546744 CA4P22748 312 aa13.84□□□□□ -0.19
PTCH1-212ENST00000546744 MDM2Q00987 491 aaPredicted RBP13.84□□□□□ -0.19
PTCH1-212ENST00000546744 KRT39Q6A163 491 aa13.84□□□□□ -0.19
PTCH1-212ENST00000546744 UNC5CLQ8IV45 518 aa13.84□□□□□ -0.19
PTCH1-212ENST00000546744 DHX40Q8IX18 779 aaKnown RBP13.84□□□□□ -0.19
PTCH1-212ENST00000546744 ELOA2Q8IYF1 753 aaPredicted RBP13.84□□□□□ -0.19
PTCH1-212ENST00000546744 CCDC124Q96CT7 223 aaKnown RBP13.84□□□□□ -0.19
PTCH1-212ENST00000546744 LGR6Q9HBX8 967 aa13.84□□□□□ -0.19
PTCH1-212ENST00000546744 COL3A1P02461 1466 aaPredicted RBP13.84□□□□□ -0.19
PTCH1-212ENST00000546744 IQANK1A0A1B0GTG1 560 aa13.84□□□□□ -0.19
PTCH1-212ENST00000546744 EXOC1LA0A1B0GW35 172 aa13.84□□□□□ -0.19
PTCH1-212ENST00000546744 ANKRD65E5RJM6 399 aa13.84□□□□□ -0.19
PTCH1-212ENST00000546744 MT-ND3P03897 115 aa13.84□□□□□ -0.19
PTCH1-212ENST00000546744 ACTN1P12814 892 aa13.84□□□□□ -0.19
PTCH1-212ENST00000546744 CDR2Q01850 454 aa13.84□□□□□ -0.19
PTCH1-212ENST00000546744 RPS6KA2Q15349 733 aa13.84□□□□□ -0.19
PTCH1-212ENST00000546744 CCNI2Q6ZMN8 369 aaPredicted RBP13.84□□□□□ -0.19
PTCH1-212ENST00000546744 CENPUQ71F23 418 aa13.84□□□□□ -0.19
PTCH1-212ENST00000546744 GPBP1Q86WP2 473 aa13.84□□□□□ -0.19
PTCH1-212ENST00000546744 IFNL3Q8IZI9 196 aa13.84□□□□□ -0.19
PTCH1-212ENST00000546744 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.84□□□□□ -0.19
PTCH1-212ENST00000546744 MYL10Q9BUA6 226 aa13.84□□□□□ -0.19
PTCH1-212ENST00000546744 UPF3AQ9H1J1 476 aaKnown RBP13.84□□□□□ -0.19
PTCH1-212ENST00000546744 IFT122Q9HBG6 1241 aa13.84□□□□□ -0.19
PTCH1-212ENST00000546744 ITGB1BP2Q9UKP3 347 aa13.84□□□□□ -0.19
PTCH1-212ENST00000546744 EXOC5O00471 708 aa13.84□□□□□ -0.19
PTCH1-212ENST00000546744 APOEP02649 317 aa13.84□□□□□ -0.19
PTCH1-212ENST00000546744 ZAP70P43403 619 aa13.84□□□□□ -0.19
PTCH1-212ENST00000546744 KPNA2P52292 529 aaKnown RBP13.84□□□□□ -0.19
PTCH1-212ENST00000546744 MAGOHP61326 146 aaKnown RBP13.84□□□□□ -0.19
PTCH1-212ENST00000546744 BEND6Q5SZJ8 279 aaPredicted RBP13.84□□□□□ -0.19
PTCH1-212ENST00000546744 SPATA5Q8NB90 893 aa13.84□□□□□ -0.19
PTCH1-212ENST00000546744 FAM129AQ9BZQ8 928 aa13.84□□□□□ -0.19
PTCH1-212ENST00000546744 ETNK1Q9HBU6 452 aa13.84□□□□□ -0.19
PTCH1-212ENST00000546744 NDE1Q9NXR1 346 aa13.84□□□□□ -0.19
PTCH1-212ENST00000546744 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.84□□□□□ -0.19
PTCH1-212ENST00000546744 IQSEC2Q5JU85 1478 aa13.84□□□□□ -0.19
PTCH1-212ENST00000546744 C6orf229H3BNL8 230 aa13.83□□□□□ -0.19
PTCH1-212ENST00000546744 ORC2Q13416 577 aaPredicted RBP13.83□□□□□ -0.19
PTCH1-212ENST00000546744 SLC39A6Q13433 755 aa13.83□□□□□ -0.19
PTCH1-212ENST00000546744 DHX34Q14147 1143 aaKnown RBP13.83□□□□□ -0.19
PTCH1-212ENST00000546744 WDR75Q8IWA0 830 aaKnown RBP13.83□□□□□ -0.19
PTCH1-212ENST00000546744 CDAN1Q8IWY9 1227 aa13.83□□□□□ -0.19
PTCH1-212ENST00000546744 HOMEZQ8IX15 550 aa13.83□□□□□ -0.19
PTCH1-212ENST00000546744 LARP4BQ92615 738 aaKnown RBP13.83□□□□□ -0.19
PTCH1-212ENST00000546744 TMOD4Q9NZQ9 345 aa13.83□□□□□ -0.19
PTCH1-212ENST00000546744 PDP2Q9P2J9 529 aa13.83□□□□□ -0.19
PTCH1-212ENST00000546744 TRPC6Q9Y210 931 aa13.83□□□□□ -0.19
PTCH1-212ENST00000546744 TNKSO95271 1327 aa13.83□□□□□ -0.19
PTCH1-212ENST00000546744 UBAP1LF5GYI3 381 aa13.83□□□□□ -0.2
PTCH1-212ENST00000546744 HAUS5O94927 633 aa13.83□□□□□ -0.2
PTCH1-212ENST00000546744 GSTA1P08263 222 aa13.83□□□□□ -0.2
PTCH1-212ENST00000546744 ABCD1P33897 745 aa13.83□□□□□ -0.2
PTCH1-212ENST00000546744 RAD23BP54727 409 aa13.83□□□□□ -0.2
PTCH1-212ENST00000546744 SNX1Q13596 522 aa13.83□□□□□ -0.2
PTCH1-212ENST00000546744 IL17REQ8NFR9 667 aa13.83□□□□□ -0.2
PTCH1-212ENST00000546744 PI4K2BQ8TCG2 481 aa13.83□□□□□ -0.2
PTCH1-212ENST00000546744 CEP72Q9P209 647 aa13.83□□□□□ -0.2
PTCH1-212ENST00000546744 ARHGAP44Q17R89 818 aa13.83□□□□□ -0.2
PTCH1-212ENST00000546744 RCSD1Q6JBY9 416 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms