RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 PPFIA4O75335 1185 aa11□□□□□ -0.65
CHD4-212ENST00000545083 EIF3JO75822 258 aaKnown RBP11□□□□□ -0.65
CHD4-212ENST00000545083 EYA4O95677 639 aa11□□□□□ -0.65
CHD4-212ENST00000545083 RB1P06400 928 aa11□□□□□ -0.65
CHD4-212ENST00000545083 NR3C2P08235 984 aa11□□□□□ -0.65
CHD4-212ENST00000545083 SP2Q02086 613 aa11□□□□□ -0.65
CHD4-212ENST00000545083 ADAM15Q13444 863 aa11□□□□□ -0.65
CHD4-212ENST00000545083 ARHGEF16Q5VV41 709 aa11□□□□□ -0.65
CHD4-212ENST00000545083 ADGRD2Q7Z7M1 963 aa11□□□□□ -0.65
CHD4-212ENST00000545083 SUGP1Q8IWZ8 645 aaKnown RBP11□□□□□ -0.65
CHD4-212ENST00000545083 FBXL6Q8N531 539 aa11□□□□□ -0.65
CHD4-212ENST00000545083 ATP6V0A1Q93050 837 aa11□□□□□ -0.65
CHD4-212ENST00000545083 IL17RAQ96F46 866 aa11□□□□□ -0.65
CHD4-212ENST00000545083 SPATA33Q96N06 139 aa11□□□□□ -0.65
CHD4-212ENST00000545083 C11orf84Q9BUA3 381 aaPredicted RBP11□□□□□ -0.65
CHD4-212ENST00000545083 LMAN2LQ9H0V9 348 aa11□□□□□ -0.65
CHD4-212ENST00000545083 BCAS3Q9H6U6 928 aa11□□□□□ -0.65
CHD4-212ENST00000545083 DCTPP1Q9H773 170 aa11□□□□□ -0.65
CHD4-212ENST00000545083 PXMP2Q9NR77 195 aa11□□□□□ -0.65
CHD4-212ENST00000545083 CLEC1BQ9P126 229 aa11□□□□□ -0.65
CHD4-212ENST00000545083 KMT2EQ8IZD2 1858 aa11□□□□□ -0.65
CHD4-212ENST00000545083 LOC730098B7Z3J9 87 aa10.99□□□□□ -0.65
CHD4-212ENST00000545083 OPLAHO14841 1288 aa10.99□□□□□ -0.65
CHD4-212ENST00000545083 GGPS1O95749 300 aa10.99□□□□□ -0.65
CHD4-212ENST00000545083 SMIM10L2AP0DMW4 78 aa10.99□□□□□ -0.65
CHD4-212ENST00000545083 SMIM10L2BP0DMW5 78 aa10.99□□□□□ -0.65
CHD4-212ENST00000545083 DNAJB1P25685 340 aa10.99□□□□□ -0.65
CHD4-212ENST00000545083 CBX2Q14781 532 aaPredicted RBP10.99□□□□□ -0.65
CHD4-212ENST00000545083 ALX1Q15699 326 aa10.99□□□□□ -0.65
CHD4-212ENST00000545083 CELF3Q5SZQ8 465 aaKnown RBP10.99□□□□□ -0.65
CHD4-212ENST00000545083 GPKOWQ92917 476 aaPredicted RBP eCLIP10.99□□□□□ -0.65
CHD4-212ENST00000545083 CLP1Q92989 425 aaKnown RBP10.99□□□□□ -0.65
CHD4-212ENST00000545083 ZFP91Q96JP5 570 aaPredicted RBP10.99□□□□□ -0.65
CHD4-212ENST00000545083 PRRX2Q99811 253 aa10.99□□□□□ -0.65
CHD4-212ENST00000545083 MAF1Q9H063 256 aa10.99□□□□□ -0.65
CHD4-212ENST00000545083 RNPEPQ9H4A4 650 aa10.99□□□□□ -0.65
CHD4-212ENST00000545083 ABCB11O95342 1321 aa10.99□□□□□ -0.65
CHD4-212ENST00000545083 TTC41PQ6P2S7 1318 aa10.99□□□□□ -0.65
CHD4-212ENST00000545083 RALGAPA2Q2PPJ7 1873 aa10.99□□□□□ -0.65
CHD4-212ENST00000545083 FAM186AA6NE01 2351 aa10.98□□□□□ -0.65
CHD4-212ENST00000545083 FGAP02671 866 aa10.98□□□□□ -0.65
CHD4-212ENST00000545083 MMP1P03956 469 aa10.98□□□□□ -0.65
CHD4-212ENST00000545083 UBA1P22314 1058 aaKnown RBP10.98□□□□□ -0.65
CHD4-212ENST00000545083 NDUFV1P49821 464 aa10.98□□□□□ -0.65
CHD4-212ENST00000545083 RRP1P56182 461 aaKnown RBP10.98□□□□□ -0.65
CHD4-212ENST00000545083 HAND2P61296 217 aa10.98□□□□□ -0.65
CHD4-212ENST00000545083 PKN1Q16512 942 aa10.98□□□□□ -0.65
CHD4-212ENST00000545083 QRICH1Q2TAL8 776 aa10.98□□□□□ -0.65
CHD4-212ENST00000545083 GPATCH4Q5T3I0 446 aaKnown RBP10.98□□□□□ -0.65
CHD4-212ENST00000545083 C20orf194Q5TEA3 1177 aa10.98□□□□□ -0.65
CHD4-212ENST00000545083 TBC1D10CQ8IV04 446 aa10.98□□□□□ -0.65
CHD4-212ENST00000545083 ADGRF4Q8IZF3 695 aa10.98□□□□□ -0.65
CHD4-212ENST00000545083 SMRP1Q8NCR6 262 aa10.98□□□□□ -0.65
CHD4-212ENST00000545083 IL31RAQ8NI17 732 aa10.98□□□□□ -0.65
CHD4-212ENST00000545083 ASIC4Q96FT7 647 aa10.98□□□□□ -0.65
CHD4-212ENST00000545083 TTC14Q96N46 770 aa10.98□□□□□ -0.65
CHD4-212ENST00000545083 PDCD2LQ9BRP1 358 aa10.98□□□□□ -0.65
CHD4-212ENST00000545083 SUPT16HQ9Y5B9 1047 aaKnown RBP10.98□□□□□ -0.65
CHD4-212ENST00000545083 ADGRA3Q8IWK6 1321 aa10.98□□□□□ -0.65
CHD4-212ENST00000545083 MYH7BA7E2Y1 1941 aa10.97□□□□□ -0.65
CHD4-212ENST00000545083 GVINP1Q7Z2Y8 2422 aa10.97□□□□□ -0.65
CHD4-212ENST00000545083 H3BRB1 525 aa10.97□□□□□ -0.65
CHD4-212ENST00000545083 CAND2O75155 1236 aa10.97□□□□□ -0.65
CHD4-212ENST00000545083 CFBP00751 764 aa10.97□□□□□ -0.65
CHD4-212ENST00000545083 LGALS2P05162 132 aa10.97□□□□□ -0.65
CHD4-212ENST00000545083 MYCLP12524 364 aaPredicted RBP10.97□□□□□ -0.65
CHD4-212ENST00000545083 SIGLEC14Q08ET2 396 aa10.97□□□□□ -0.65
CHD4-212ENST00000545083 FAM26DQ5JW98 314 aa10.97□□□□□ -0.65
CHD4-212ENST00000545083 MCF2L2Q86YR7 1114 aa10.97□□□□□ -0.65
CHD4-212ENST00000545083 MIER1Q8N108 512 aa10.97□□□□□ -0.65
CHD4-212ENST00000545083 APBB2Q92870 758 aa10.97□□□□□ -0.65
CHD4-212ENST00000545083 ZNF689Q96CS4 500 aaPredicted RBP10.97□□□□□ -0.65
CHD4-212ENST00000545083 ZKSCAN3Q9BRR0 538 aa10.97□□□□□ -0.65
CHD4-212ENST00000545083 CHMP4BQ9H444 224 aaKnown RBP10.97□□□□□ -0.65
CHD4-212ENST00000545083 TUT1Q9H6E5 874 aaKnown RBP10.97□□□□□ -0.65
CHD4-212ENST00000545083 SETD4Q9NVD3 440 aa10.97□□□□□ -0.65
CHD4-212ENST00000545083 BARX2Q9UMQ3 279 aaPredicted RBP10.97□□□□□ -0.65
CHD4-212ENST00000545083 PLAGL2Q9UPG8 496 aa10.97□□□□□ -0.65
CHD4-212ENST00000545083 RWDD3Q9Y3V2 267 aa10.97□□□□□ -0.65
CHD4-212ENST00000545083 USP15Q9Y4E8 981 aaPredicted RBP10.97□□□□□ -0.65
CHD4-212ENST00000545083 DCHS1Q96JQ0 3298 aa10.97□□□□□ -0.65
CHD4-212ENST00000545083 PLXNA3P51805 1871 aa10.96□□□□□ -0.65
CHD4-212ENST00000545083 H0Y858 1186 aa10.96□□□□□ -0.65
CHD4-212ENST00000545083 GLP2RO95838 553 aa10.96□□□□□ -0.65
CHD4-212ENST00000545083 PDGFBP01127 241 aaPredicted RBP10.96□□□□□ -0.65
CHD4-212ENST00000545083 CHRNA1P02708 482 aa10.96□□□□□ -0.65
CHD4-212ENST00000545083 ITGB1P05556 798 aa10.96□□□□□ -0.65
CHD4-212ENST00000545083 HSPD1P10809 573 aaKnown RBP10.96□□□□□ -0.65
CHD4-212ENST00000545083 GHRP10912 638 aa10.96□□□□□ -0.65
CHD4-212ENST00000545083 AVPR2P30518 371 aa10.96□□□□□ -0.65
CHD4-212ENST00000545083 HSD17B4P51659 736 aa10.96□□□□□ -0.65
CHD4-212ENST00000545083 ADAM17P78536 824 aa10.96□□□□□ -0.65
CHD4-212ENST00000545083 FOXK2Q01167 660 aa10.96□□□□□ -0.65
CHD4-212ENST00000545083 COASYQ13057 564 aa10.96□□□□□ -0.65
CHD4-212ENST00000545083 ASCL5Q7RTU5 278 aa10.96□□□□□ -0.65
CHD4-212ENST00000545083 VSIG10LQ86VR7 867 aa10.96□□□□□ -0.65
CHD4-212ENST00000545083 EFHBQ8N7U6 833 aa10.96□□□□□ -0.65
CHD4-212ENST00000545083 ATOH1Q92858 354 aaPredicted RBP10.96□□□□□ -0.65
CHD4-212ENST00000545083 JMJD4Q9H9V9 463 aa10.96□□□□□ -0.65
CHD4-212ENST00000545083 TLR9Q9NR96 1032 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms