RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 CYP2D7A0A087X1C5 515 aa13.87□□□□□ -0.19
SMG8-202ENST00000543872 UBOX5O94941 541 aa13.87□□□□□ -0.19
SMG8-202ENST00000543872 CELF4Q9BZC1 486 aaKnown RBP13.87□□□□□ -0.19
SMG8-202ENST00000543872 MTFR1LQ9H019 292 aa13.87□□□□□ -0.19
SMG8-202ENST00000543872 SIK3Q9Y2K2 1263 aa13.87□□□□□ -0.19
SMG8-202ENST00000543872 IGF2BP3O00425 579 aaKnown RBP eCLIP13.87□□□□□ -0.19
SMG8-202ENST00000543872 PJA2O43164 708 aa13.87□□□□□ -0.19
SMG8-202ENST00000543872 ECHS1P30084 290 aa13.87□□□□□ -0.19
SMG8-202ENST00000543872 FIGNQ5HY92 759 aa13.87□□□□□ -0.19
SMG8-202ENST00000543872 CRELD2Q6UXH1 353 aaPredicted RBP13.87□□□□□ -0.19
SMG8-202ENST00000543872 IFNL2Q8IZJ0 200 aa13.87□□□□□ -0.19
SMG8-202ENST00000543872 ENAHQ8N8S7 591 aaPredicted RBP13.87□□□□□ -0.19
SMG8-202ENST00000543872 TNFRSF25Q93038 417 aa13.87□□□□□ -0.19
SMG8-202ENST00000543872 KLHL29Q96CT2 875 aa13.87□□□□□ -0.19
SMG8-202ENST00000543872 TMEM60Q9H2L4 133 aa13.87□□□□□ -0.19
SMG8-202ENST00000543872 KANSL2Q9H9L4 492 aa13.87□□□□□ -0.19
SMG8-202ENST00000543872 ECM29Q5VYK3 1845 aa13.87□□□□□ -0.19
SMG8-202ENST00000543872 CUL1Q13616 776 aa13.86□□□□□ -0.19
SMG8-202ENST00000543872 TAF11Q15544 211 aa13.86□□□□□ -0.19
SMG8-202ENST00000543872 SLC5A9Q2M3M2 681 aa13.86□□□□□ -0.19
SMG8-202ENST00000543872 SLC9C1Q4G0N8 1177 aa13.86□□□□□ -0.19
SMG8-202ENST00000543872 ERMARDQ5T6L9 678 aa13.86□□□□□ -0.19
SMG8-202ENST00000543872 ESR2Q92731 530 aa13.86□□□□□ -0.19
SMG8-202ENST00000543872 ACSBG1Q96GR2 724 aa13.86□□□□□ -0.19
SMG8-202ENST00000543872 FAM129AQ9BZQ8 928 aa13.86□□□□□ -0.19
SMG8-202ENST00000543872 ECT2Q9H8V3 914 aa13.86□□□□□ -0.19
SMG8-202ENST00000543872 KRIT1O00522 736 aa13.86□□□□□ -0.19
SMG8-202ENST00000543872 ITGA4P13612 1032 aa13.86□□□□□ -0.19
SMG8-202ENST00000543872 NQO1P15559 274 aaKnown RBP13.86□□□□□ -0.19
SMG8-202ENST00000543872 HNRNPH3P31942 346 aaKnown RBP13.86□□□□□ -0.19
SMG8-202ENST00000543872 L3MBTL3Q96JM7 780 aaPredicted RBP13.86□□□□□ -0.19
SMG8-202ENST00000543872 RNF41Q9H4P4 317 aaPredicted RBP13.86□□□□□ -0.19
SMG8-202ENST00000543872 IQSEC3Q9UPP2 1182 aaPredicted RBP13.86□□□□□ -0.19
SMG8-202ENST00000543872 DIP2AQ14689 1571 aa13.86□□□□□ -0.19
SMG8-202ENST00000543872 GRID2IPA4D2P6 1211 aa13.85□□□□□ -0.19
SMG8-202ENST00000543872 SMIM24O75264 130 aa13.85□□□□□ -0.19
SMG8-202ENST00000543872 SHBGP04278 402 aa13.85□□□□□ -0.19
SMG8-202ENST00000543872 RAPGEF1Q13905 1077 aa13.85□□□□□ -0.19
SMG8-202ENST00000543872 MEI1Q5TIA1 1274 aa13.85□□□□□ -0.19
SMG8-202ENST00000543872 PDXDC1Q6P996 788 aa13.85□□□□□ -0.19
SMG8-202ENST00000543872 ADAT2Q7Z6V5 191 aaKnown RBP13.85□□□□□ -0.19
SMG8-202ENST00000543872 CCHCR1Q8TD31 782 aa13.85□□□□□ -0.19
SMG8-202ENST00000543872 GPKOWQ92917 476 aaPredicted RBP eCLIP13.85□□□□□ -0.19
SMG8-202ENST00000543872 PRMT1Q99873 361 aaKnown RBP13.85□□□□□ -0.19
SMG8-202ENST00000543872 ZCWPW1Q9H0M4 648 aa13.85□□□□□ -0.19
SMG8-202ENST00000543872 SEMA6BQ9H3T3 888 aa13.85□□□□□ -0.19
SMG8-202ENST00000543872 GREM2Q9H772 168 aa13.85□□□□□ -0.19
SMG8-202ENST00000543872 LUC7LQ9NQ29 371 aaKnown RBP13.85□□□□□ -0.19
SMG8-202ENST00000543872 TTI1O43156 1089 aa13.85□□□□□ -0.19
SMG8-202ENST00000543872 COQ9O75208 318 aa13.85□□□□□ -0.19
SMG8-202ENST00000543872 PLCG1P19174 1290 aa13.85□□□□□ -0.19
SMG8-202ENST00000543872 POLR2FP61218 127 aaKnown RBP13.85□□□□□ -0.19
SMG8-202ENST00000543872 FUT2Q10981 343 aa13.85□□□□□ -0.19
SMG8-202ENST00000543872 MTMR3Q13615 1198 aa13.85□□□□□ -0.19
SMG8-202ENST00000543872 C1QTNF12Q5T7M4 302 aa13.85□□□□□ -0.19
SMG8-202ENST00000543872 CCDC84Q86UT8 332 aaPredicted RBP13.85□□□□□ -0.19
SMG8-202ENST00000543872 MGARPQ8TDB4 240 aa13.85□□□□□ -0.19
SMG8-202ENST00000543872 LRRC15Q8TF66 581 aa13.85□□□□□ -0.19
SMG8-202ENST00000543872 OSBPL1AQ9BXW6 950 aa13.85□□□□□ -0.19
SMG8-202ENST00000543872 ARHGEF10LQ9HCE6 1279 aa13.85□□□□□ -0.19
SMG8-202ENST00000543872 INTS9Q9NV88 658 aaKnown RBP13.85□□□□□ -0.19
SMG8-202ENST00000543872 SLCO1A2P46721 670 aa13.85□□□□□ -0.19
SMG8-202ENST00000543872 NAB2Q15742 525 aa13.85□□□□□ -0.19
SMG8-202ENST00000543872 PDCD2Q16342 344 aaPredicted RBP13.85□□□□□ -0.19
SMG8-202ENST00000543872 SRBD1Q8N5C6 995 aaKnown RBP13.85□□□□□ -0.19
SMG8-202ENST00000543872 BAP1Q92560 729 aa13.85□□□□□ -0.19
SMG8-202ENST00000543872 PICK1Q9NRD5 415 aa13.85□□□□□ -0.19
SMG8-202ENST00000543872 TRIM33Q9UPN9 1127 aa13.85□□□□□ -0.19
SMG8-202ENST00000543872 LCA5LO95447 670 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 PAEPP09466 180 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 SFMBT2Q5VUG0 894 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 SLC30A9Q6PML9 568 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 DYMQ7RTS9 669 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 DRAXINQ8NBI3 349 aaPredicted RBP13.84□□□□□ -0.19
SMG8-202ENST00000543872 SLC5A4Q9NY91 659 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 RTL9Q8NET4 1388 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 A0A087X0T9 212 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 PDHA1P08559 390 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 LINGO3P0C6S8 592 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 FAM228BP0C875 321 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 USP4Q13107 963 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 SEC23AQ15436 765 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 ANKRD20A2Q5SQ80 823 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 ANKRD20A1Q5TYW2 823 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 ANKRD20A3Q5VUR7 823 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 ZSCAN29Q8IWY8 852 aaPredicted RBP13.84□□□□□ -0.19
SMG8-202ENST00000543872 SPATA5Q8NB90 893 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 DYDC1Q8WWB3 177 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 ZSCAN10Q96SZ4 725 aaPredicted RBP13.84□□□□□ -0.19
SMG8-202ENST00000543872 LRP2BPQ9P2M1 347 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 CORO1CQ9ULV4 474 aaPredicted RBP13.84□□□□□ -0.19
SMG8-202ENST00000543872 SLC12A4Q9UP95 1085 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 LMO7Q8WWI1 1683 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 CCDC194A0A1B0GVG4 234 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 CFAP73A6NFT4 308 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 F8VZ95 297 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 ECEL1O95672 775 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 KRT16P08779 473 aa13.84□□□□□ -0.19
SMG8-202ENST00000543872 CTCFP49711 727 aaPredicted RBP13.84□□□□□ -0.19
SMG8-202ENST00000543872 IFI35P80217 286 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms