RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 GUCA1BQ9UMX6 200 aa15.43■□□□□ 0.06
MSH2-206ENST00000543555 FAM86B1E9PN63 330 aa15.43■□□□□ 0.06
MSH2-206ENST00000543555 FAM86B2P0C5J1 330 aa15.43■□□□□ 0.06
MSH2-206ENST00000543555 CHMP4BP1P59074 171 aa15.43■□□□□ 0.06
MSH2-206ENST00000543555 TMCO3Q6UWJ1 677 aa15.43■□□□□ 0.06
MSH2-206ENST00000543555 NIM1KQ8IY84 436 aa15.43■□□□□ 0.06
MSH2-206ENST00000543555 SPICE1Q8N0Z3 855 aa15.43■□□□□ 0.06
MSH2-206ENST00000543555 PCDHA2Q9Y5H9 948 aa15.43■□□□□ 0.06
MSH2-206ENST00000543555 CLRN2A0PK11 232 aa15.43■□□□□ 0.06
MSH2-206ENST00000543555 POTEFA5A3E0 1075 aa15.43■□□□□ 0.06
MSH2-206ENST00000543555 EIF3CLB5ME19 914 aaKnown RBP15.43■□□□□ 0.06
MSH2-206ENST00000543555 POTEIP0CG38 1075 aa15.43■□□□□ 0.06
MSH2-206ENST00000543555 FKBP3Q00688 224 aaKnown RBP15.43■□□□□ 0.06
MSH2-206ENST00000543555 CXCL9Q07325 125 aa15.43■□□□□ 0.06
MSH2-206ENST00000543555 POTEGQ6S5H5 508 aa15.43■□□□□ 0.06
MSH2-206ENST00000543555 POTEEQ6S8J3 1075 aa15.43■□□□□ 0.06
MSH2-206ENST00000543555 CCDC84Q86UT8 332 aaPredicted RBP15.43■□□□□ 0.06
MSH2-206ENST00000543555 KRT222Q8N1A0 295 aa15.43■□□□□ 0.06
MSH2-206ENST00000543555 ERMNQ8TAM6 284 aa15.43■□□□□ 0.06
MSH2-206ENST00000543555 JDP2Q8WYK2 163 aa15.43■□□□□ 0.06
MSH2-206ENST00000543555 EIF3CQ99613 913 aaKnown RBP15.43■□□□□ 0.06
MSH2-206ENST00000543555 FGFBP2Q9BYJ0 223 aa15.43■□□□□ 0.06
MSH2-206ENST00000543555 ARHGEF10LQ9HCE6 1279 aa15.43■□□□□ 0.06
MSH2-206ENST00000543555 NPHP3-ACAD11A0A0J9YXS1 232 aa15.42■□□□□ 0.06
MSH2-206ENST00000543555 HNRNPH3P31942 346 aaKnown RBP15.42■□□□□ 0.06
MSH2-206ENST00000543555 CIITAP33076 1130 aa15.42■□□□□ 0.06
MSH2-206ENST00000543555 ECE1P42892 770 aa15.42■□□□□ 0.06
MSH2-206ENST00000543555 SLC12A3P55017 1021 aa15.42■□□□□ 0.06
MSH2-206ENST00000543555 BMS1Q14692 1282 aaKnown RBP15.42■□□□□ 0.06
MSH2-206ENST00000543555 CATSPER3Q86XQ3 398 aa15.42■□□□□ 0.06
MSH2-206ENST00000543555 PSMD1Q99460 953 aa15.42■□□□□ 0.06
MSH2-206ENST00000543555 PCNTO95613 3336 aa15.42■□□□□ 0.06
MSH2-206ENST00000543555 PSME4Q14997 1843 aa15.42■□□□□ 0.06
MSH2-206ENST00000543555 ZRANB2O95218 330 aaKnown RBP eCLIP15.42■□□□□ 0.06
MSH2-206ENST00000543555 ZSCAN20P17040 1043 aaPredicted RBP15.42■□□□□ 0.06
MSH2-206ENST00000543555 HOXA13P31271 388 aaPredicted RBP15.42■□□□□ 0.06
MSH2-206ENST00000543555 CCDC122Q5T0U0 273 aa15.42■□□□□ 0.06
MSH2-206ENST00000543555 NCAPH2Q6IBW4 605 aa15.42■□□□□ 0.06
MSH2-206ENST00000543555 KIAA1328Q86T90 577 aa15.42■□□□□ 0.06
MSH2-206ENST00000543555 FAM151AQ8WW52 585 aa15.42■□□□□ 0.06
MSH2-206ENST00000543555 FAM20AQ96MK3 541 aa15.42■□□□□ 0.06
MSH2-206ENST00000543555 ZSWIM4Q9H7M6 989 aa15.42■□□□□ 0.06
MSH2-206ENST00000543555 FAM207AQ9NSI2 230 aaPredicted RBP15.42■□□□□ 0.06
MSH2-206ENST00000543555 TBC1D7Q9P0N9 293 aa15.42■□□□□ 0.06
MSH2-206ENST00000543555 PUF60Q9UHX1 559 aaKnown RBP15.42■□□□□ 0.06
MSH2-206ENST00000543555 PLAGL2Q9UPG8 496 aa15.42■□□□□ 0.06
MSH2-206ENST00000543555 COL4A3BPQ9Y5P4 624 aa15.42■□□□□ 0.06
MSH2-206ENST00000543555 PITPNM2Q9BZ72 1349 aa15.42■□□□□ 0.06
MSH2-206ENST00000543555 FRMD3A2A2Y4 597 aa15.41■□□□□ 0.06
MSH2-206ENST00000543555 EPHB6O15197 1021 aa15.41■□□□□ 0.06
MSH2-206ENST00000543555 IPO7O95373 1038 aaKnown RBP15.41■□□□□ 0.06
MSH2-206ENST00000543555 STAT2P52630 851 aa15.41■□□□□ 0.06
MSH2-206ENST00000543555 CACNB1Q02641 598 aaPredicted RBP15.41■□□□□ 0.06
MSH2-206ENST00000543555 GRIPAP1Q4V328 841 aa15.41■□□□□ 0.06
MSH2-206ENST00000543555 ARSHQ5FYA8 562 aa15.41■□□□□ 0.06
MSH2-206ENST00000543555 HERC4Q5GLZ8 1057 aaPredicted RBP15.41■□□□□ 0.06
MSH2-206ENST00000543555 PRDM10Q9NQV6 1147 aa15.41■□□□□ 0.06
MSH2-206ENST00000543555 ZNF70Q9UC06 446 aaPredicted RBP15.41■□□□□ 0.06
MSH2-206ENST00000543555 FHOD1Q9Y613 1164 aa15.41■□□□□ 0.06
MSH2-206ENST00000543555 PIK3CDO00329 1044 aa15.41■□□□□ 0.06
MSH2-206ENST00000543555 TRAF5O00463 557 aa15.41■□□□□ 0.06
MSH2-206ENST00000543555 EGFRP00533 1210 aa15.41■□□□□ 0.06
MSH2-206ENST00000543555 RPA1P27694 616 aa15.41■□□□□ 0.06
MSH2-206ENST00000543555 AMPD2Q01433 879 aa15.41■□□□□ 0.06
MSH2-206ENST00000543555 WHAMMP3Q1A5X7 153 aa15.41■□□□□ 0.06
MSH2-206ENST00000543555 ACER1Q8TDN7 264 aa15.41■□□□□ 0.06
MSH2-206ENST00000543555 JAKMIP2Q96AA8 810 aa15.41■□□□□ 0.06
MSH2-206ENST00000543555 GMLQ99445 158 aa15.41■□□□□ 0.06
MSH2-206ENST00000543555 MMRN2Q9H8L6 949 aa15.41■□□□□ 0.06
MSH2-206ENST00000543555 HDAC9Q9UKV0 1011 aa15.41■□□□□ 0.06
MSH2-206ENST00000543555 TFR2Q9UP52 801 aa15.41■□□□□ 0.06
MSH2-206ENST00000543555 TMX2Q9Y320 296 aa15.41■□□□□ 0.06
MSH2-206ENST00000543555 KRT86O43790 486 aa15.41■□□□□ 0.06
MSH2-206ENST00000543555 KRT18P05783 430 aaKnown RBP15.41■□□□□ 0.06
MSH2-206ENST00000543555 DLGAP5Q15398 846 aa15.41■□□□□ 0.06
MSH2-206ENST00000543555 KIAA1755Q5JYT7 1200 aa15.41■□□□□ 0.06
MSH2-206ENST00000543555 SCFD1Q8WVM8 642 aa15.41■□□□□ 0.06
MSH2-206ENST00000543555 CEP63Q96MT8 703 aa15.41■□□□□ 0.06
MSH2-206ENST00000543555 PARD6BQ9BYG5 372 aa15.41■□□□□ 0.06
MSH2-206ENST00000543555 STK24Q9Y6E0 443 aa15.41■□□□□ 0.06
MSH2-206ENST00000543555 MSH4O15457 936 aa15.4■□□□□ 0.06
MSH2-206ENST00000543555 KIF20AO95235 890 aa15.4■□□□□ 0.06
MSH2-206ENST00000543555 CYP3A4P08684 503 aa15.4■□□□□ 0.06
MSH2-206ENST00000543555 VIL1P09327 827 aaKnown RBP15.4■□□□□ 0.06
MSH2-206ENST00000543555 SPATA31C1P0DKV0 1188 aa15.4■□□□□ 0.06
MSH2-206ENST00000543555 ERCC3P19447 782 aa15.4■□□□□ 0.06
MSH2-206ENST00000543555 RAD51AP2Q09MP3 1159 aa15.4■□□□□ 0.06
MSH2-206ENST00000543555 GPR162Q16538 588 aa15.4■□□□□ 0.06
MSH2-206ENST00000543555 NELFCDQ8IXH7 590 aa15.4■□□□□ 0.06
MSH2-206ENST00000543555 ZBTB21Q9ULJ3 1066 aa15.4■□□□□ 0.06
MSH2-206ENST00000543555 MYO6Q9UM54 1294 aa15.4■□□□□ 0.06
MSH2-206ENST00000543555 CNTNAP1P78357 1384 aa15.4■□□□□ 0.06
MSH2-206ENST00000543555 PNMA6AP0CW24 399 aaPredicted RBP15.4■□□□□ 0.06
MSH2-206ENST00000543555 TRAF1Q13077 416 aa15.4■□□□□ 0.06
MSH2-206ENST00000543555 CCDC40Q4G0X9 1142 aa15.4■□□□□ 0.06
MSH2-206ENST00000543555 EHBP1Q8NDI1 1231 aa15.4■□□□□ 0.06
MSH2-206ENST00000543555 CCDC42Q96M95 316 aa15.4■□□□□ 0.06
MSH2-206ENST00000543555 KCTD10Q9H3F6 313 aa15.4■□□□□ 0.06
MSH2-206ENST00000543555 GOPCQ9HD26 462 aa15.4■□□□□ 0.06
MSH2-206ENST00000543555 EMILIN3Q9NT22 766 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms