RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 GDF11O95390 407 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 TTLL1O95922 423 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 CALML3P27482 149 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 USP17L24Q0WX57 530 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 NR5A1Q13285 461 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 CCDC85BQ15834 202 aaPredicted RBP9.28□□□□□ -0.92
LMO3-226ENST00000541589 ASPRV1Q53RT3 343 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 TATDN1Q6P1N9 297 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 C16orf59Q7L2K0 433 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 METTL3Q86U44 580 aaKnown RBP9.28□□□□□ -0.92
LMO3-226ENST00000541589 GPIHBP1Q8IV16 184 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 ENGASEQ8NFI3 743 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.28□□□□□ -0.92
LMO3-226ENST00000541589 TRIM34Q9BYJ4 488 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 PANK2Q9BZ23 570 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 GOLPH3LQ9H4A5 285 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 EPHX3Q9H6B9 360 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.28□□□□□ -0.92
LMO3-226ENST00000541589 CHD7Q9P2D1 2997 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 CEP131Q9UPN4 1083 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 MORC2Q9Y6X9 1032 aaPredicted RBP9.28□□□□□ -0.92
LMO3-226ENST00000541589 IVNS1ABPQ9Y6Y0 642 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 GREB1LQ9C091 1923 aaPredicted RBP9.28□□□□□ -0.92
LMO3-226ENST00000541589 REV3LO60673 3130 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 ZNF236Q9UL36 1845 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 GRXCR1A8MXD5 290 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 KINO60870 393 aaKnown RBP9.28□□□□□ -0.92
LMO3-226ENST00000541589 CUTAO60888 179 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 CCDC192P0DO97 292 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 SNHG28P0DPA3 235 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 CMA1P23946 247 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 ADORA2AP29274 412 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 TOB1P50616 345 aaPredicted RBP9.28□□□□□ -0.92
LMO3-226ENST00000541589 NLRP5P59047 1200 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 FAAP100Q0VG06 881 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 NPY5RQ15761 445 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 TMEM240Q5SV17 173 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 AXDND1Q5T1B0 1012 aaPredicted RBP9.28□□□□□ -0.92
LMO3-226ENST00000541589 WDR78Q5VTH9 848 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 GALNT17Q6IS24 598 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 ANKRD33Q7Z3H0 272 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 FMR1NBQ8N0W7 255 aaPredicted RBP9.28□□□□□ -0.92
LMO3-226ENST00000541589 CCDC148Q8NFR7 591 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 ANP32BQ92688 251 aaKnown RBP9.28□□□□□ -0.92
LMO3-226ENST00000541589 TNFRSF25Q93038 417 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 TOX2Q96NM4 488 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 TMEM39AQ9NV64 488 aa9.28□□□□□ -0.92
LMO3-226ENST00000541589 NOL7Q9UMY1 257 aaKnown RBP9.28□□□□□ -0.92
LMO3-226ENST00000541589 MYH8P13535 1937 aa9.27□□□□□ -0.92
LMO3-226ENST00000541589 FAM237AA0A1B0GTK4 181 aa9.27□□□□□ -0.93
LMO3-226ENST00000541589 hCG_1984214I3L0E3 225 aa9.27□□□□□ -0.93
LMO3-226ENST00000541589 MPHOSPH10O00566 681 aaKnown RBP9.27□□□□□ -0.93
LMO3-226ENST00000541589 CYTH3O43739 400 aa9.27□□□□□ -0.93
LMO3-226ENST00000541589 STRNO43815 780 aa9.27□□□□□ -0.93
LMO3-226ENST00000541589 COBLO75128 1261 aa9.27□□□□□ -0.93
LMO3-226ENST00000541589 BMP15O95972 392 aa9.27□□□□□ -0.93
LMO3-226ENST00000541589 TIMP1P01033 207 aa9.27□□□□□ -0.93
LMO3-226ENST00000541589 PDHBP11177 359 aa9.27□□□□□ -0.93
LMO3-226ENST00000541589 SNW1Q13573 536 aaKnown RBP9.27□□□□□ -0.93
LMO3-226ENST00000541589 CAMK4Q16566 473 aa9.27□□□□□ -0.93
LMO3-226ENST00000541589 SLC35G1Q2M3R5 365 aa9.27□□□□□ -0.93
LMO3-226ENST00000541589 UVSSAQ2YD98 709 aa9.27□□□□□ -0.93
LMO3-226ENST00000541589 CERKLQ49MI3 558 aaPredicted RBP9.27□□□□□ -0.93
LMO3-226ENST00000541589 PRAMEF19Q5SWL8 479 aa9.27□□□□□ -0.93
LMO3-226ENST00000541589 Q6ZNB5 142 aa9.27□□□□□ -0.93
LMO3-226ENST00000541589 DPP9Q86TI2 863 aa9.27□□□□□ -0.93
LMO3-226ENST00000541589 ZNF713Q8N859 430 aaPredicted RBP9.27□□□□□ -0.93
LMO3-226ENST00000541589 DAGLBQ8NCG7 672 aa9.27□□□□□ -0.93
LMO3-226ENST00000541589 RRP36Q96EU6 259 aaKnown RBP9.27□□□□□ -0.93
LMO3-226ENST00000541589 MTRQ99707 1265 aa9.27□□□□□ -0.93
LMO3-226ENST00000541589 CABP5Q9NP86 173 aa9.27□□□□□ -0.93
LMO3-226ENST00000541589 C11orf16Q9NQ32 467 aa9.27□□□□□ -0.93
LMO3-226ENST00000541589 NYAP2Q9P242 653 aa9.27□□□□□ -0.93
LMO3-226ENST00000541589 CLIP2Q9UDT6 1046 aa9.27□□□□□ -0.93
LMO3-226ENST00000541589 TBX21Q9UL17 535 aa9.27□□□□□ -0.93
LMO3-226ENST00000541589 MTMR7Q9Y216 660 aa9.27□□□□□ -0.93
LMO3-226ENST00000541589 A0A1W2PQ45 241 aaPredicted RBP9.26□□□□□ -0.93
LMO3-226ENST00000541589 A0A1W2PQY0 241 aa9.26□□□□□ -0.93
LMO3-226ENST00000541589 STXBP3O00186 592 aa9.26□□□□□ -0.93
LMO3-226ENST00000541589 PQBP1O60828 265 aaKnown RBP9.26□□□□□ -0.93
LMO3-226ENST00000541589 GOLGA8HP0CJ92 632 aa9.26□□□□□ -0.93
LMO3-226ENST00000541589 VCAM1P19320 739 aa9.26□□□□□ -0.93
LMO3-226ENST00000541589 IGFBP4P22692 258 aa9.26□□□□□ -0.93
LMO3-226ENST00000541589 MARCKSP29966 332 aaPredicted RBP9.26□□□□□ -0.93
LMO3-226ENST00000541589 TRAPPC10P48553 1259 aa9.26□□□□□ -0.93
LMO3-226ENST00000541589 NDUFA8P51970 172 aa9.26□□□□□ -0.93
LMO3-226ENST00000541589 TFF2Q03403 129 aa9.26□□□□□ -0.93
LMO3-226ENST00000541589 CCDC173Q0VFZ6 552 aa9.26□□□□□ -0.93
LMO3-226ENST00000541589 TMEM31Q5JXX7 168 aa9.26□□□□□ -0.93
LMO3-226ENST00000541589 WWC2Q6AWC2 1192 aa9.26□□□□□ -0.93
LMO3-226ENST00000541589 MFSD5Q6N075 450 aa9.26□□□□□ -0.93
LMO3-226ENST00000541589 TMEM179Q6ZVK1 233 aa9.26□□□□□ -0.93
LMO3-226ENST00000541589 ALYREFQ86V81 257 aaKnown RBP9.26□□□□□ -0.93
LMO3-226ENST00000541589 BLIDQ8IZY5 108 aa9.26□□□□□ -0.93
LMO3-226ENST00000541589 LRRC47Q8N1G4 583 aaKnown RBP9.26□□□□□ -0.93
LMO3-226ENST00000541589 KRI1Q8N9T8 703 aaKnown RBP9.26□□□□□ -0.93
LMO3-226ENST00000541589 CCDC12Q8WUD4 166 aaPredicted RBP9.26□□□□□ -0.93
LMO3-226ENST00000541589 PIBF1Q8WXW3 757 aa9.26□□□□□ -0.93
LMO3-226ENST00000541589 MKL1Q969V6 931 aa9.26□□□□□ -0.93
LMO3-226ENST00000541589 MOV10L1Q9BXT6 1211 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms