RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 ZBTB40Q9NUA8 1239 aa6.96□□□□□ -1.3
CPSF7-219ENST00000539952 TCP11L1Q9NUJ3 509 aa6.96□□□□□ -1.3
CPSF7-219ENST00000539952 RWDD3Q9Y3V2 267 aa6.96□□□□□ -1.3
CPSF7-219ENST00000539952 TRIP12Q14669 1992 aaPredicted RBP6.96□□□□□ -1.3
CPSF7-219ENST00000539952 SCN10AQ9Y5Y9 1956 aa6.96□□□□□ -1.3
CPSF7-219ENST00000539952 PTPRZ1P23471 2315 aaPredicted RBP6.95□□□□□ -1.3
CPSF7-219ENST00000539952 HAS3O00219 553 aa6.95□□□□□ -1.3
CPSF7-219ENST00000539952 MBTPS2O43462 519 aa6.95□□□□□ -1.3
CPSF7-219ENST00000539952 RANBP6O60518 1105 aaKnown RBP6.95□□□□□ -1.3
CPSF7-219ENST00000539952 EIF3JO75822 258 aaKnown RBP6.95□□□□□ -1.3
CPSF7-219ENST00000539952 IGHDP01880 384 aa6.95□□□□□ -1.3
CPSF7-219ENST00000539952 FGRP09769 529 aa6.95□□□□□ -1.3
CPSF7-219ENST00000539952 TOP1P11387 765 aaKnown RBP6.95□□□□□ -1.3
CPSF7-219ENST00000539952 LTBRP36941 435 aa6.95□□□□□ -1.3
CPSF7-219ENST00000539952 LY6KQ17RY6 165 aa6.95□□□□□ -1.3
CPSF7-219ENST00000539952 KIAA0753Q2KHM9 967 aa6.95□□□□□ -1.3
CPSF7-219ENST00000539952 CTC1Q2NKJ3 1217 aa6.95□□□□□ -1.3
CPSF7-219ENST00000539952 TSR1Q2NL82 804 aaKnown RBP6.95□□□□□ -1.3
CPSF7-219ENST00000539952 TRIM71Q2Q1W2 868 aaKnown RBP6.95□□□□□ -1.3
CPSF7-219ENST00000539952 SKOR2Q2VWA4 1001 aaPredicted RBP6.95□□□□□ -1.3
CPSF7-219ENST00000539952 PLEKHG4Q58EX7 1191 aa6.95□□□□□ -1.3
CPSF7-219ENST00000539952 TTBK2Q6IQ55 1244 aa6.95□□□□□ -1.3
CPSF7-219ENST00000539952 KCNV1Q6PIU1 500 aa6.95□□□□□ -1.3
CPSF7-219ENST00000539952 TRAF7Q6Q0C0 670 aa6.95□□□□□ -1.3
CPSF7-219ENST00000539952 TRIM67Q6ZTA4 783 aa6.95□□□□□ -1.3
CPSF7-219ENST00000539952 CHST3Q7LGC8 479 aa6.95□□□□□ -1.3
CPSF7-219ENST00000539952 FBXO11Q86XK2 927 aa6.95□□□□□ -1.3
CPSF7-219ENST00000539952 MCF2L2Q86YR7 1114 aa6.95□□□□□ -1.3
CPSF7-219ENST00000539952 SUGP1Q8IWZ8 645 aaKnown RBP6.95□□□□□ -1.3
CPSF7-219ENST00000539952 DHX37Q8IY37 1157 aaKnown RBP6.95□□□□□ -1.3
CPSF7-219ENST00000539952 PANK1Q8TE04 598 aa6.95□□□□□ -1.3
CPSF7-219ENST00000539952 PPP2R3CQ969Q6 453 aa6.95□□□□□ -1.3
CPSF7-219ENST00000539952 EMID1Q96A84 441 aaPredicted RBP6.95□□□□□ -1.3
CPSF7-219ENST00000539952 TBC1D32Q96NH3 1257 aa6.95□□□□□ -1.3
CPSF7-219ENST00000539952 YME1L1Q96TA2 773 aa6.95□□□□□ -1.3
CPSF7-219ENST00000539952 ALG1Q9BT22 464 aa6.95□□□□□ -1.3
CPSF7-219ENST00000539952 CHMP5Q9NZZ3 219 aa6.95□□□□□ -1.3
CPSF7-219ENST00000539952 DDX41Q9UJV9 622 aaKnown RBP6.95□□□□□ -1.3
CPSF7-219ENST00000539952 MTMR7Q9Y216 660 aa6.95□□□□□ -1.3
CPSF7-219ENST00000539952 PCDHGA10Q9Y5H3 936 aa6.95□□□□□ -1.3
CPSF7-219ENST00000539952 WDR19Q8NEZ3 1342 aa6.95□□□□□ -1.3
CPSF7-219ENST00000539952 SCN5AQ14524 2016 aa6.94□□□□□ -1.3
CPSF7-219ENST00000539952 GOLGA6L3A6NEY3 463 aa6.94□□□□□ -1.3
CPSF7-219ENST00000539952 C5orf67F2Z3F1 127 aa6.94□□□□□ -1.3
CPSF7-219ENST00000539952 M0R2C6 588 aa6.94□□□□□ -1.3
CPSF7-219ENST00000539952 STXBP3O00186 592 aa6.94□□□□□ -1.3
CPSF7-219ENST00000539952 ORC4O43929 436 aa6.94□□□□□ -1.3
CPSF7-219ENST00000539952 NMT2O60551 498 aa6.94□□□□□ -1.3
CPSF7-219ENST00000539952 CAND2O75155 1236 aa6.94□□□□□ -1.3
CPSF7-219ENST00000539952 UPP2O95045 317 aa6.94□□□□□ -1.3
CPSF7-219ENST00000539952 ARIH2O95376 493 aa6.94□□□□□ -1.3
CPSF7-219ENST00000539952 BMPR1AP36894 532 aa6.94□□□□□ -1.3
CPSF7-219ENST00000539952 THPOP40225 353 aa6.94□□□□□ -1.3
CPSF7-219ENST00000539952 ARHGAP1Q07960 439 aa6.94□□□□□ -1.3
CPSF7-219ENST00000539952 ADAM15Q13444 863 aa6.94□□□□□ -1.3
CPSF7-219ENST00000539952 TCTN1Q2MV58 587 aa6.94□□□□□ -1.3
CPSF7-219ENST00000539952 RPAINQ86UA6 219 aa6.94□□□□□ -1.3
CPSF7-219ENST00000539952 FBXL6Q8N531 539 aa6.94□□□□□ -1.3
CPSF7-219ENST00000539952 FIBCD1Q8N539 461 aa6.94□□□□□ -1.3
CPSF7-219ENST00000539952 APBB2Q92870 758 aa6.94□□□□□ -1.3
CPSF7-219ENST00000539952 IL17RAQ96F46 866 aa6.94□□□□□ -1.3
CPSF7-219ENST00000539952 TAAR1Q96RJ0 339 aa6.94□□□□□ -1.3
CPSF7-219ENST00000539952 TMEM47Q9BQJ4 181 aa6.94□□□□□ -1.3
CPSF7-219ENST00000539952 C11orf84Q9BUA3 381 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-219ENST00000539952 GPCPD1Q9NPB8 672 aa6.94□□□□□ -1.3
CPSF7-219ENST00000539952 MAP3K20Q9NYL2 800 aaKnown RBP6.94□□□□□ -1.3
CPSF7-219ENST00000539952 MUTYHQ9UIF7 546 aa6.94□□□□□ -1.3
CPSF7-219ENST00000539952 CD207Q9UJ71 328 aa6.94□□□□□ -1.3
CPSF7-219ENST00000539952 ANAPC4Q9UJX5 808 aa6.94□□□□□ -1.3
CPSF7-219ENST00000539952 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.94□□□□□ -1.3
CPSF7-219ENST00000539952 GREB1LQ9C091 1923 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-219ENST00000539952 XIRP2A4UGR9 3374 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 C17orf102A2RUQ5 167 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 TMEM221A6NGB7 291 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 M0R296 226 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 EYA4O95677 639 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 F2P00734 622 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 TGFB3P10600 412 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 PDHBP11177 359 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 GNAT1P11488 350 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 ZXDAP98168 799 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 CTDSPL2Q05D32 466 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 SMAD4Q13485 552 aaKnown RBP6.93□□□□□ -1.3
CPSF7-219ENST00000539952 MBTPS1Q14703 1052 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 ALX1Q15699 326 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 NAALADL2Q58DX5 795 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 ZMYM1Q5SVZ6 1142 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 GPATCH4Q5T3I0 446 aaKnown RBP6.93□□□□□ -1.3
CPSF7-219ENST00000539952 ARHGEF16Q5VV41 709 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 MYSM1Q5VVJ2 828 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 SLC30A10Q6XR72 485 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 SERINC5Q86VE9 423 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 SAMD3Q8N6K7 520 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 PRSS33Q8NF86 280 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 PPTC7Q8NI37 304 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 UBE2Q2Q8WVN8 375 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 ATOH1Q92858 354 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-219ENST00000539952 ATP6V0A1Q93050 837 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 RMDN3Q96TC7 470 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 PHOX2BQ99453 314 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms