RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 HOXA13P31271 388 aaPredicted RBP11.3□□□□□ -0.6
SPARC-209ENST00000539687 MTIF2P46199 727 aaKnown RBP11.3□□□□□ -0.6
SPARC-209ENST00000539687 PRELPP51888 382 aa11.3□□□□□ -0.6
SPARC-209ENST00000539687 SNAP25P60880 206 aa11.3□□□□□ -0.6
SPARC-209ENST00000539687 FKBP3Q00688 224 aaKnown RBP11.3□□□□□ -0.6
SPARC-209ENST00000539687 RASSF7Q02833 373 aa11.3□□□□□ -0.6
SPARC-209ENST00000539687 COASYQ13057 564 aa11.3□□□□□ -0.6
SPARC-209ENST00000539687 ZYXQ15942 572 aaKnown RBP11.3□□□□□ -0.6
SPARC-209ENST00000539687 TBC1D10BQ4KMP7 808 aaPredicted RBP11.3□□□□□ -0.6
SPARC-209ENST00000539687 HSP90AA4PQ58FG1 418 aa11.3□□□□□ -0.6
SPARC-209ENST00000539687 KIAA1755Q5JYT7 1200 aa11.3□□□□□ -0.6
SPARC-209ENST00000539687 LRCH2Q5VUJ6 765 aa11.3□□□□□ -0.6
SPARC-209ENST00000539687 E4F1Q66K89 784 aaPredicted RBP11.3□□□□□ -0.6
SPARC-209ENST00000539687 DYMQ7RTS9 669 aa11.3□□□□□ -0.6
SPARC-209ENST00000539687 SAMD7Q7Z3H4 446 aa11.3□□□□□ -0.6
SPARC-209ENST00000539687 CCDC84Q86UT8 332 aaPredicted RBP11.3□□□□□ -0.6
SPARC-209ENST00000539687 GPBP1Q86WP2 473 aa11.3□□□□□ -0.6
SPARC-209ENST00000539687 MB21D1Q8N884 522 aa11.3□□□□□ -0.6
SPARC-209ENST00000539687 KIAA0895Q8NCT3 520 aa11.3□□□□□ -0.6
SPARC-209ENST00000539687 ZNF280CQ8ND82 737 aa11.3□□□□□ -0.6
SPARC-209ENST00000539687 ZNF397Q8NF99 534 aaPredicted RBP11.3□□□□□ -0.6
SPARC-209ENST00000539687 RBM46Q8TBY0 533 aaKnown RBP11.3□□□□□ -0.6
SPARC-209ENST00000539687 PPP1R13BQ96KQ4 1090 aa11.3□□□□□ -0.6
SPARC-209ENST00000539687 TUBGCP2Q9BSJ2 902 aa11.3□□□□□ -0.6
SPARC-209ENST00000539687 TANGO6Q9C0B7 1094 aa11.3□□□□□ -0.6
SPARC-209ENST00000539687 TAB2Q9NYJ8 693 aa11.3□□□□□ -0.6
SPARC-209ENST00000539687 MAPK8IP1Q9UQF2 711 aa11.3□□□□□ -0.6
SPARC-209ENST00000539687 FRMPD4Q14CM0 1322 aa11.3□□□□□ -0.6
SPARC-209ENST00000539687 RPTORQ8N122 1335 aa11.3□□□□□ -0.6
SPARC-209ENST00000539687 POTEB3A0JP26 581 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 POTECB2RU33 542 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 MEIS1O00470 390 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 TBCAO75347 108 aaKnown RBP11.29□□□□□ -0.6
SPARC-209ENST00000539687 FLOT1O75955 427 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 SSBP05455 408 aaKnown RBP eCLIP11.29□□□□□ -0.6
SPARC-209ENST00000539687 CYP11B2P19099 503 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 VCAM1P19320 739 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 SLC12A3P55017 1021 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 BACE1P56817 501 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 PPP2R3AQ06190 1150 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 EPHA7Q15375 998 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 SYCP1Q15431 976 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 MAN2A1Q16706 1144 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 EDRF1Q3B7T1 1238 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 PCNX4Q63HM2 1172 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 ANKRD40Q6AI12 368 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 POTEBQ6S5H4 581 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 CATSPER3Q86XQ3 398 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 LRRC15Q8TF66 581 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 DNAJC19Q96DA6 116 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 CNOT6LQ96LI5 555 aaKnown RBP11.29□□□□□ -0.6
SPARC-209ENST00000539687 NACC1Q96RE7 527 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 DUSP9Q99956 384 aaKnown RBP11.29□□□□□ -0.6
SPARC-209ENST00000539687 NUDT12Q9BQG2 462 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 MXRA8Q9BRK3 442 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 ZNF577Q9BSK1 485 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 NOC4LQ9BVI4 516 aaKnown RBP11.29□□□□□ -0.6
SPARC-209ENST00000539687 VPS16Q9H269 839 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 SLC39A2Q9NP94 309 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 ZNHIT6Q9NWK9 470 aaKnown RBP11.29□□□□□ -0.6
SPARC-209ENST00000539687 TMOD4Q9NZQ9 345 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 SEL1LQ9UBV2 794 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 COL4A3BPQ9Y5P4 624 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 UBE4BO95155 1302 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 PHLPP2Q6ZVD8 1323 aa11.29□□□□□ -0.6
SPARC-209ENST00000539687 A0A1W2PQJ5 194 aa11.28□□□□□ -0.6
SPARC-209ENST00000539687 TRIM49BA6NDI0 452 aa11.28□□□□□ -0.6
SPARC-209ENST00000539687 TEX33O43247 280 aa11.28□□□□□ -0.6
SPARC-209ENST00000539687 MED24O75448 989 aa11.28□□□□□ -0.6
SPARC-209ENST00000539687 PSMD10O75832 226 aa11.28□□□□□ -0.6
SPARC-209ENST00000539687 FCER1AP12319 257 aa11.28□□□□□ -0.6
SPARC-209ENST00000539687 RPL13P26373 211 aaKnown RBP11.28□□□□□ -0.6
SPARC-209ENST00000539687 INPP5BP32019 993 aa11.28□□□□□ -0.6
SPARC-209ENST00000539687 RBL2Q08999 1139 aa11.28□□□□□ -0.6
SPARC-209ENST00000539687 MTMR2Q13614 643 aa11.28□□□□□ -0.6
SPARC-209ENST00000539687 HERC4Q5GLZ8 1057 aaPredicted RBP11.28□□□□□ -0.6
SPARC-209ENST00000539687 ANGEL2Q5VTE6 544 aaKnown RBP11.28□□□□□ -0.6
SPARC-209ENST00000539687 CYP26C1Q6V0L0 522 aa11.28□□□□□ -0.6
SPARC-209ENST00000539687 OTOP1Q7RTM1 612 aa11.28□□□□□ -0.6
SPARC-209ENST00000539687 IRF2BP1Q8IU81 584 aa11.28□□□□□ -0.6
SPARC-209ENST00000539687 CREBRFQ8IUR6 639 aa11.28□□□□□ -0.6
SPARC-209ENST00000539687 TMEM139Q8IV31 216 aa11.28□□□□□ -0.6
SPARC-209ENST00000539687 CDAN1Q8IWY9 1227 aa11.28□□□□□ -0.6
SPARC-209ENST00000539687 ERGIC2Q96RQ1 377 aa11.28□□□□□ -0.6
SPARC-209ENST00000539687 WRNIP1Q96S55 665 aa11.28□□□□□ -0.6
SPARC-209ENST00000539687 MAP7D2Q96T17 732 aa11.28□□□□□ -0.6
SPARC-209ENST00000539687 EIF2AK1Q9BQI3 630 aaKnown RBP11.28□□□□□ -0.6
SPARC-209ENST00000539687 TIPINQ9BVW5 301 aa11.28□□□□□ -0.6
SPARC-209ENST00000539687 EDEM3Q9BZQ6 932 aa11.28□□□□□ -0.6
SPARC-209ENST00000539687 RPAP3Q9H6T3 665 aaPredicted RBP11.28□□□□□ -0.6
SPARC-209ENST00000539687 TBC1D22BQ9NU19 505 aa11.28□□□□□ -0.6
SPARC-209ENST00000539687 FAM184BQ9ULE4 1060 aa11.28□□□□□ -0.6
SPARC-209ENST00000539687 ZNF536O15090 1300 aa11.28□□□□□ -0.6
SPARC-209ENST00000539687 ZNF541Q9H0D2 1346 aa11.28□□□□□ -0.6
SPARC-209ENST00000539687 RBBP6Q7Z6E9 1792 aaKnown RBP11.27□□□□□ -0.61
SPARC-209ENST00000539687 E9PMD0 336 aa11.27□□□□□ -0.61
SPARC-209ENST00000539687 PES1O00541 588 aaKnown RBP11.27□□□□□ -0.61
SPARC-209ENST00000539687 ATP2A1O14983 1001 aa11.27□□□□□ -0.61
SPARC-209ENST00000539687 MAFGO15525 162 aa11.27□□□□□ -0.61
SPARC-209ENST00000539687 CALUO43852 315 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms