RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 ATP10AO60312 1499 aa4.68□□□□□ -1.66
AC055720.1-201ENST00000539552 ATP10BO94823 1461 aa4.68□□□□□ -1.66
AC055720.1-201ENST00000539552 LRRC9Q6ZRR7 1453 aa4.68□□□□□ -1.66
AC055720.1-201ENST00000539552 KIF14Q15058 1648 aa4.68□□□□□ -1.66
AC055720.1-201ENST00000539552 AHDC1Q5TGY3 1603 aaPredicted RBP4.68□□□□□ -1.66
AC055720.1-201ENST00000539552 AGLP35573 1532 aa4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 DISP1Q96F81 1524 aa4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 AATKQ6ZMQ8 1374 aa4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 REREQ9P2R6 1566 aa4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 A0A087X0B3 334 aa4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 MYOCOSA0A1B0GUC4 107 aa4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 AGRPO00253 132 aa4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 TCERG1O14776 1098 aaKnown RBP4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 TCEA3O75764 348 aa4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 F13A1P00488 732 aa4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 F2P00734 622 aa4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 CPEP16870 476 aa4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 TFE3P19532 575 aaPredicted RBP4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 HTR3AP46098 478 aa4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 MLC1Q15049 377 aa4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 GFOD2Q3B7J2 385 aa4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 FAM83BQ5T0W9 1011 aa4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 LLGL2Q6P1M3 1020 aa4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 LETMD1Q6P1Q0 360 aa4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 BNC2Q6ZN30 1099 aaPredicted RBP4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 EEPD1Q7L9B9 569 aa4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 UBE3DQ7Z6J8 389 aa4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 RNF180Q86T96 592 aa4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 SMAP1Q8IYB5 467 aaPredicted RBP4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 AFAP1L2Q8N4X5 818 aa4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 SNRNP27Q8WVK2 155 aaKnown RBP4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 TEPSINQ96N21 525 aa4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 NEUROD6Q96NK8 337 aa4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 CDC5LQ99459 802 aaKnown RBP4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 ZNF552Q9H707 407 aaPredicted RBP4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 MYRFQ9Y2G1 1151 aa4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 RALGAPBQ86X10 1494 aa4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 RPGRIP1LQ68CZ1 1315 aa4.67□□□□□ -1.66
AC055720.1-201ENST00000539552 ZC3H12DA2A288 527 aaKnown RBP4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 OR14I1A6ND48 311 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 ENC1O14682 589 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 SLC26A4O43511 780 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 PDE8AO60658 829 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 KATNA1O75449 491 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 TRIM27P14373 513 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 GARTP22102 1010 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 TPP2P29144 1249 aaPredicted RBP4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 LTKP29376 864 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 CRKP46108 304 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 ETF1P62495 437 aaKnown RBP4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 CHRNEQ04844 493 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 SEPT6Q14141 434 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 SSPNQ14714 243 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 ZC3H12BQ5HYM0 836 aaKnown RBP4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 OLFML2BQ68BL8 750 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 REC114Q7Z4M0 266 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 NECAB2Q7Z6G3 386 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 CPXCR1Q8N123 301 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 MAGEB6Q8N7X4 407 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 FAM169BQ8N8A8 192 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 ST13P5Q8NFI4 369 aaPredicted RBP4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 ATL2Q8NHH9 583 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 RIN3Q8TB24 985 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 PIWIL2Q8TC59 973 aaKnown RBP4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 ZNF669Q96BR6 464 aaPredicted RBP4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 BDH2Q9BUT1 245 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 RTFDC1Q9BY42 306 aaPredicted RBP4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 RSPH9Q9H1X1 276 aaPredicted RBP4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 BRMS1Q9HCU9 246 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 NGRNQ9NPE2 291 aaKnown RBP4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 SRRDQ9UH36 339 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 PFDN2Q9UHV9 154 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 DUSP13Q9UII6 198 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 ZNRF3Q9ULT6 936 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 GTF2A1LQ9UNN4 478 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 MAPRE3Q9UPY8 281 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 YBX2Q9Y2T7 364 aaKnown RBP4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 ARHGAP23Q9P227 1491 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 NUP188Q5SRE5 1749 aa4.66□□□□□ -1.66
AC055720.1-201ENST00000539552 DIP2CQ9Y2E4 1556 aa4.65□□□□□ -1.66
AC055720.1-201ENST00000539552 RREB1Q92766 1687 aa4.65□□□□□ -1.66
AC055720.1-201ENST00000539552 ITSN2Q9NZM3 1697 aa4.65□□□□□ -1.66
AC055720.1-201ENST00000539552 IRS4O14654 1257 aaPredicted RBP4.65□□□□□ -1.67
AC055720.1-201ENST00000539552 DIAPH1O60610 1272 aaKnown RBP4.65□□□□□ -1.67
AC055720.1-201ENST00000539552 RFPL3O75679 317 aa4.65□□□□□ -1.67
AC055720.1-201ENST00000539552 RNASEH2AO75792 299 aaKnown RBP4.65□□□□□ -1.67
AC055720.1-201ENST00000539552 ESR1P03372 595 aa4.65□□□□□ -1.67
AC055720.1-201ENST00000539552 NAT2P11245 290 aa4.65□□□□□ -1.67
AC055720.1-201ENST00000539552 CASP7P55210 303 aa4.65□□□□□ -1.67
AC055720.1-201ENST00000539552 SRSF3P84103 164 aaKnown RBP4.65□□□□□ -1.67
AC055720.1-201ENST00000539552 EGR3Q06889 387 aa4.65□□□□□ -1.67
AC055720.1-201ENST00000539552 TNK2Q07912 1038 aa4.65□□□□□ -1.67
AC055720.1-201ENST00000539552 DUSP4Q13115 394 aa4.65□□□□□ -1.67
AC055720.1-201ENST00000539552 PICALMQ13492 652 aa4.65□□□□□ -1.67
AC055720.1-201ENST00000539552 NCAPHQ15003 741 aa4.65□□□□□ -1.67
AC055720.1-201ENST00000539552 SNX17Q15036 470 aa4.65□□□□□ -1.67
AC055720.1-201ENST00000539552 FAM178BQ8IXR5 827 aa4.65□□□□□ -1.67
AC055720.1-201ENST00000539552 LRRC47Q8N1G4 583 aaKnown RBP4.65□□□□□ -1.67
AC055720.1-201ENST00000539552 ENAHQ8N8S7 591 aaPredicted RBP4.65□□□□□ -1.67
AC055720.1-201ENST00000539552 CCDC89Q8N998 374 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms