RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 IMPDH2P12268 514 aa3.39□□□□□ -1.87
CBX3P4-201ENST00000538909 ACRV1P26436 265 aa3.39□□□□□ -1.87
CBX3P4-201ENST00000538909 BCL6P41182 706 aa3.39□□□□□ -1.87
CBX3P4-201ENST00000538909 RAC3P60763 192 aa3.39□□□□□ -1.87
CBX3P4-201ENST00000538909 ZC3H6P61129 1189 aaKnown RBP3.39□□□□□ -1.87
CBX3P4-201ENST00000538909 RPL11P62913 178 aaKnown RBP3.39□□□□□ -1.87
CBX3P4-201ENST00000538909 RBM10P98175 930 aaKnown RBP3.39□□□□□ -1.87
CBX3P4-201ENST00000538909 GRB10Q13322 594 aa3.39□□□□□ -1.87
CBX3P4-201ENST00000538909 ZNF568Q3ZCX4 644 aa3.39□□□□□ -1.87
CBX3P4-201ENST00000538909 BHLHA9Q7RTU4 235 aa3.39□□□□□ -1.87
CBX3P4-201ENST00000538909 POLNQ7Z5Q5 900 aa3.39□□□□□ -1.87
CBX3P4-201ENST00000538909 NLRP10Q86W26 655 aa3.39□□□□□ -1.87
CBX3P4-201ENST00000538909 RIOX2Q8IUF8 465 aa3.39□□□□□ -1.87
CBX3P4-201ENST00000538909 ARHGEF39Q8N4T4 335 aa3.39□□□□□ -1.87
CBX3P4-201ENST00000538909 ZNF808Q8N4W9 903 aaPredicted RBP3.39□□□□□ -1.87
CBX3P4-201ENST00000538909 DPYSL5Q9BPU6 564 aa3.39□□□□□ -1.87
CBX3P4-201ENST00000538909 NT5C1AQ9BXI3 368 aa3.39□□□□□ -1.87
CBX3P4-201ENST00000538909 SLC2A4RGQ9NR83 387 aa3.39□□□□□ -1.87
CBX3P4-201ENST00000538909 COA3Q9Y2R0 106 aaPredicted RBP3.39□□□□□ -1.87
CBX3P4-201ENST00000538909 FBXO21O94952 628 aa3.38□□□□□ -1.87
CBX3P4-201ENST00000538909 KRT4P19013 534 aa3.38□□□□□ -1.87
CBX3P4-201ENST00000538909 GLRBP48167 497 aa3.38□□□□□ -1.87
CBX3P4-201ENST00000538909 SMAD2Q15796 467 aaKnown RBP3.38□□□□□ -1.87
CBX3P4-201ENST00000538909 STEAP3Q658P3 488 aa3.38□□□□□ -1.87
CBX3P4-201ENST00000538909 AJUBAQ96IF1 538 aa3.38□□□□□ -1.87
CBX3P4-201ENST00000538909 PPT2Q9UMR5 302 aa3.38□□□□□ -1.87
CBX3P4-201ENST00000538909 TIMM13Q9Y5L4 95 aaPredicted RBP3.38□□□□□ -1.87
CBX3P4-201ENST00000538909 X6R8D5 127 aa3.38□□□□□ -1.87
CBX3P4-201ENST00000538909 CDC14BO60729 498 aa3.37□□□□□ -1.87
CBX3P4-201ENST00000538909 KNG1P01042 644 aa3.37□□□□□ -1.87
CBX3P4-201ENST00000538909 ERBB2P04626 1255 aa3.37□□□□□ -1.87
CBX3P4-201ENST00000538909 CR2P20023 1033 aa3.37□□□□□ -1.87
CBX3P4-201ENST00000538909 COL10A1Q03692 680 aa3.37□□□□□ -1.87
CBX3P4-201ENST00000538909 KCNA1Q09470 495 aa3.37□□□□□ -1.87
CBX3P4-201ENST00000538909 USP10Q14694 798 aaKnown RBP3.37□□□□□ -1.87
CBX3P4-201ENST00000538909 NOLC1Q14978 699 aaKnown RBP eCLIP3.37□□□□□ -1.87
CBX3P4-201ENST00000538909 CHRNA2Q15822 529 aa3.37□□□□□ -1.87
CBX3P4-201ENST00000538909 ZKSCAN2Q63HK3 967 aa3.37□□□□□ -1.87
CBX3P4-201ENST00000538909 VASNQ6EMK4 673 aa3.37□□□□□ -1.87
CBX3P4-201ENST00000538909 MAMDC4Q6UXC1 1216 aa3.37□□□□□ -1.87
CBX3P4-201ENST00000538909 HS2ST1Q7LGA3 356 aa3.37□□□□□ -1.87
CBX3P4-201ENST00000538909 KIAA0825Q8IV33 1275 aa3.37□□□□□ -1.87
CBX3P4-201ENST00000538909 COPS5Q92905 334 aa3.37□□□□□ -1.87
CBX3P4-201ENST00000538909 TMEM169Q96HH4 297 aa3.37□□□□□ -1.87
CBX3P4-201ENST00000538909 SPON2Q9BUD6 331 aa3.37□□□□□ -1.87
CBX3P4-201ENST00000538909 FBXL7Q9UJT9 491 aa3.37□□□□□ -1.87
CBX3P4-201ENST00000538909 OAZ3Q9UMX2 235 aa3.37□□□□□ -1.87
CBX3P4-201ENST00000538909 AKT3Q9Y243 479 aa3.37□□□□□ -1.87
CBX3P4-201ENST00000538909 SCRIBQ14160 1630 aa3.37□□□□□ -1.87
CBX3P4-201ENST00000538909 H0Y858 1186 aa3.36□□□□□ -1.87
CBX3P4-201ENST00000538909 NUDT3O95989 172 aa3.36□□□□□ -1.87
CBX3P4-201ENST00000538909 HIBADHP31937 336 aaKnown RBP3.36□□□□□ -1.87
CBX3P4-201ENST00000538909 RRADP55042 308 aa3.36□□□□□ -1.87
CBX3P4-201ENST00000538909 KRTAP10-11P60412 298 aa3.36□□□□□ -1.87
CBX3P4-201ENST00000538909 SLC7A5Q01650 507 aa3.36□□□□□ -1.87
CBX3P4-201ENST00000538909 RNF151Q2KHN1 245 aa3.36□□□□□ -1.87
CBX3P4-201ENST00000538909 Q6ZPA2 131 aa3.36□□□□□ -1.87
CBX3P4-201ENST00000538909 PROSER1Q86XN7 944 aa3.36□□□□□ -1.87
CBX3P4-201ENST00000538909 STPG3Q8N7X2 389 aa3.36□□□□□ -1.87
CBX3P4-201ENST00000538909 DTX3Q8N9I9 347 aa3.36□□□□□ -1.87
CBX3P4-201ENST00000538909 RCC1LQ96I51 464 aaKnown RBP3.36□□□□□ -1.87
CBX3P4-201ENST00000538909 CHAMP1Q96JM3 812 aa3.36□□□□□ -1.87
CBX3P4-201ENST00000538909 PRRX2Q99811 253 aa3.36□□□□□ -1.87
CBX3P4-201ENST00000538909 PLA2G12BQ9BX93 195 aa3.36□□□□□ -1.87
CBX3P4-201ENST00000538909 C12orf65Q9H3J6 166 aaKnown RBP3.36□□□□□ -1.87
CBX3P4-201ENST00000538909 TLR9Q9NR96 1032 aa3.36□□□□□ -1.87
CBX3P4-201ENST00000538909 MYOTQ9UBF9 498 aa3.36□□□□□ -1.87
CBX3P4-201ENST00000538909 APEX2Q9UBZ4 518 aa3.36□□□□□ -1.87
CBX3P4-201ENST00000538909 ZFP69BQ9UJL9 534 aa3.36□□□□□ -1.87
CBX3P4-201ENST00000538909 SLC30A1Q9Y6M5 507 aa3.36□□□□□ -1.87
CBX3P4-201ENST00000538909 MASP2O00187 686 aa3.35□□□□□ -1.87
CBX3P4-201ENST00000538909 FOXN1O15353 648 aa3.35□□□□□ -1.87
CBX3P4-201ENST00000538909 MYO1BO43795 1136 aa3.35□□□□□ -1.87
CBX3P4-201ENST00000538909 TADA3O75528 432 aa3.35□□□□□ -1.87
CBX3P4-201ENST00000538909 FBLP22087 321 aaKnown RBP3.35□□□□□ -1.87
CBX3P4-201ENST00000538909 DNAJA1P31689 397 aaKnown RBP3.35□□□□□ -1.87
CBX3P4-201ENST00000538909 GRIN1Q05586 938 aa3.35□□□□□ -1.87
CBX3P4-201ENST00000538909 SKIDA1Q1XH10 827 aa3.35□□□□□ -1.87
CBX3P4-201ENST00000538909 FBXO33Q7Z6M2 555 aa3.35□□□□□ -1.87
CBX3P4-201ENST00000538909 Q8N1Y9 231 aa3.35□□□□□ -1.87
CBX3P4-201ENST00000538909 FRS2Q8WU20 508 aa3.35□□□□□ -1.87
CBX3P4-201ENST00000538909 PTGFRNQ9P2B2 879 aa3.35□□□□□ -1.87
CBX3P4-201ENST00000538909 CKMP06732 381 aa3.34□□□□□ -1.87
CBX3P4-201ENST00000538909 MSX2P35548 267 aaPredicted RBP3.34□□□□□ -1.87
CBX3P4-201ENST00000538909 LAIR1Q6GTX8 287 aa3.34□□□□□ -1.87
CBX3P4-201ENST00000538909 CCDC81Q6ZN84 652 aa3.34□□□□□ -1.87
CBX3P4-201ENST00000538909 CCDC103Q8IW40 242 aa3.34□□□□□ -1.87
CBX3P4-201ENST00000538909 REXO1L1PQ8IX06 675 aa3.34□□□□□ -1.87
CBX3P4-201ENST00000538909 ULK2Q8IYT8 1036 aa3.34□□□□□ -1.87
CBX3P4-201ENST00000538909 GPR150Q8NGU9 434 aa3.34□□□□□ -1.87
CBX3P4-201ENST00000538909 NPLOC4Q8TAT6 608 aa3.34□□□□□ -1.87
CBX3P4-201ENST00000538909 DIO2Q92813 273 aa3.34□□□□□ -1.87
CBX3P4-201ENST00000538909 LGR4Q9BXB1 951 aa3.34□□□□□ -1.87
CBX3P4-201ENST00000538909 KATNBL1Q9H079 304 aa3.34□□□□□ -1.87
CBX3P4-201ENST00000538909 CEP72Q9P209 647 aa3.34□□□□□ -1.87
CBX3P4-201ENST00000538909 ARHGAP20Q9P2F6 1191 aa3.34□□□□□ -1.87
CBX3P4-201ENST00000538909 NR2E1Q9Y466 385 aa3.34□□□□□ -1.87
CBX3P4-201ENST00000538909 RPS6KA4O75676 772 aa3.33□□□□□ -1.88
CBX3P4-201ENST00000538909 DGKIO75912 1065 aa3.33□□□□□ -1.88
CBX3P4-201ENST00000538909 GTF2A2P52657 109 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms