RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 CEP63Q96MT8 703 aa17.38■□□□□ 0.37
MKS1-204ENST00000537529 IRX2Q9BZI1 471 aaPredicted RBP17.38■□□□□ 0.37
MKS1-204ENST00000537529 PIM2Q9P1W9 311 aa17.38■□□□□ 0.37
MKS1-204ENST00000537529 FEM1BQ9UK73 627 aa17.38■□□□□ 0.37
MKS1-204ENST00000537529 VAV3Q9UKW4 847 aa17.38■□□□□ 0.37
MKS1-204ENST00000537529 CFBP00751 764 aa17.37■□□□□ 0.37
MKS1-204ENST00000537529 CYLC1P35663 651 aaPredicted RBP17.37■□□□□ 0.37
MKS1-204ENST00000537529 ARHGAP25P42331 645 aa17.37■□□□□ 0.37
MKS1-204ENST00000537529 TUBB2AQ13885 445 aa17.37■□□□□ 0.37
MKS1-204ENST00000537529 CIAPIN1Q6FI81 312 aa17.37■□□□□ 0.37
MKS1-204ENST00000537529 WDR59Q6PJI9 974 aa17.37■□□□□ 0.37
MKS1-204ENST00000537529 MIGA2Q7L4E1 593 aa17.37■□□□□ 0.37
MKS1-204ENST00000537529 KCTD17Q8N5Z5 321 aa17.37■□□□□ 0.37
MKS1-204ENST00000537529 TUBB2BQ9BVA1 445 aa17.37■□□□□ 0.37
MKS1-204ENST00000537529 PCDHA2Q9Y5H9 948 aa17.37■□□□□ 0.37
MKS1-204ENST00000537529 NPHP3-ACAD11A0A0J9YXS1 232 aa17.36■□□□□ 0.37
MKS1-204ENST00000537529 GNA14O95837 355 aa17.36■□□□□ 0.37
MKS1-204ENST00000537529 ASNSP08243 561 aa17.36■□□□□ 0.37
MKS1-204ENST00000537529 SPATA31C1P0DKV0 1188 aa17.36■□□□□ 0.37
MKS1-204ENST00000537529 KRT83P78385 493 aa17.36■□□□□ 0.37
MKS1-204ENST00000537529 ZYXQ15942 572 aaKnown RBP17.36■□□□□ 0.37
MKS1-204ENST00000537529 CDAN1Q8IWY9 1227 aa17.36■□□□□ 0.37
MKS1-204ENST00000537529 CCDC170Q8IYT3 715 aa17.36■□□□□ 0.37
MKS1-204ENST00000537529 SYT2Q8N9I0 419 aaPredicted RBP17.36■□□□□ 0.37
MKS1-204ENST00000537529 POLR3CQ9BUI4 534 aaPredicted RBP17.36■□□□□ 0.37
MKS1-204ENST00000537529 AGPAT5Q9NUQ2 364 aa17.36■□□□□ 0.37
MKS1-204ENST00000537529 SIK3Q9Y2K2 1263 aa17.36■□□□□ 0.37
MKS1-204ENST00000537529 COL4A3BPQ9Y5P4 624 aa17.36■□□□□ 0.37
MKS1-204ENST00000537529 CTAGE9A4FU28 777 aa17.36■□□□□ 0.37
MKS1-204ENST00000537529 TRAF5O00463 557 aa17.36■□□□□ 0.37
MKS1-204ENST00000537529 TGFB2P61812 414 aa17.36■□□□□ 0.37
MKS1-204ENST00000537529 CDK17Q00537 523 aa17.36■□□□□ 0.37
MKS1-204ENST00000537529 MAP3K10Q02779 954 aa17.36■□□□□ 0.37
MKS1-204ENST00000537529 CCDC40Q4G0X9 1142 aa17.36■□□□□ 0.37
MKS1-204ENST00000537529 FBXO38Q6PIJ6 1188 aa17.36■□□□□ 0.37
MKS1-204ENST00000537529 FEZ1Q99689 392 aa17.36■□□□□ 0.37
MKS1-204ENST00000537529 TBC1D7Q9P0N9 293 aa17.36■□□□□ 0.37
MKS1-204ENST00000537529 IGLV3-22A0A075B6J6 115 aa17.35■□□□□ 0.37
MKS1-204ENST00000537529 WNT10BO00744 389 aa17.35■□□□□ 0.37
MKS1-204ENST00000537529 IPO7O95373 1038 aaKnown RBP17.35■□□□□ 0.37
MKS1-204ENST00000537529 ARSHQ5FYA8 562 aa17.35■□□□□ 0.37
MKS1-204ENST00000537529 PPP4R3CPQ6ZMV5 832 aa17.35■□□□□ 0.37
MKS1-204ENST00000537529 MYOZ2Q9NPC6 264 aa17.35■□□□□ 0.37
MKS1-204ENST00000537529 PGAP2Q9UHJ9 254 aa17.35■□□□□ 0.37
MKS1-204ENST00000537529 REXO2Q9Y3B8 237 aaKnown RBP17.35■□□□□ 0.37
MKS1-204ENST00000537529 MEIS1O00470 390 aa17.35■□□□□ 0.37
MKS1-204ENST00000537529 CACNB1Q02641 598 aaPredicted RBP17.35■□□□□ 0.37
MKS1-204ENST00000537529 PABPC4Q13310 644 aaKnown RBP eCLIP17.35■□□□□ 0.37
MKS1-204ENST00000537529 SLC35F6Q8N357 371 aa17.35■□□□□ 0.37
MKS1-204ENST00000537529 JDP2Q8WYK2 163 aa17.35■□□□□ 0.37
MKS1-204ENST00000537529 TAOK3Q9H2K8 898 aa17.35■□□□□ 0.37
MKS1-204ENST00000537529 ZHX3Q9H4I2 956 aa17.35■□□□□ 0.37
MKS1-204ENST00000537529 HAUS4Q9H6D7 363 aa17.35■□□□□ 0.37
MKS1-204ENST00000537529 EMILIN3Q9NT22 766 aa17.35■□□□□ 0.37
MKS1-204ENST00000537529 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.35■□□□□ 0.37
MKS1-204ENST00000537529 NKRFO15226 690 aaKnown RBP eCLIP17.34■□□□□ 0.37
MKS1-204ENST00000537529 RAD51AP2Q09MP3 1159 aa17.34■□□□□ 0.37
MKS1-204ENST00000537529 GIT2Q14161 759 aa17.34■□□□□ 0.37
MKS1-204ENST00000537529 NBPF9Q3BBW0 867 aa17.34■□□□□ 0.37
MKS1-204ENST00000537529 GLIPR1L2Q4G1C9 344 aa17.34■□□□□ 0.37
MKS1-204ENST00000537529 DALRD3Q5D0E6 543 aaKnown RBP17.34■□□□□ 0.37
MKS1-204ENST00000537529 NELFCDQ8IXH7 590 aa17.34■□□□□ 0.37
MKS1-204ENST00000537529 CYP2W1Q8TAV3 490 aa17.34■□□□□ 0.37
MKS1-204ENST00000537529 SCFD1Q8WVM8 642 aa17.34■□□□□ 0.37
MKS1-204ENST00000537529 NAPGQ99747 312 aaPredicted RBP17.34■□□□□ 0.37
MKS1-204ENST00000537529 EIF2AK1Q9BQI3 630 aaKnown RBP17.34■□□□□ 0.37
MKS1-204ENST00000537529 FGFBP2Q9BYJ0 223 aa17.34■□□□□ 0.37
MKS1-204ENST00000537529 EYA4O95677 639 aa17.33■□□□□ 0.37
MKS1-204ENST00000537529 H2AFXP16104 143 aaPredicted RBP17.33■□□□□ 0.37
MKS1-204ENST00000537529 PSMC6P62333 389 aa17.33■□□□□ 0.37
MKS1-204ENST00000537529 TNIP1Q15025 636 aa17.33■□□□□ 0.37
MKS1-204ENST00000537529 EDRF1Q3B7T1 1238 aa17.33■□□□□ 0.37
MKS1-204ENST00000537529 ZNF662Q6ZS27 426 aa17.33■□□□□ 0.37
MKS1-204ENST00000537529 KIAA1328Q86T90 577 aa17.33■□□□□ 0.37
MKS1-204ENST00000537529 LDHDQ86WU2 507 aa17.33■□□□□ 0.37
MKS1-204ENST00000537529 WDR18Q9BV38 432 aa17.33■□□□□ 0.37
MKS1-204ENST00000537529 TANGO6Q9C0B7 1094 aa17.33■□□□□ 0.37
MKS1-204ENST00000537529 KCTD10Q9H3F6 313 aa17.33■□□□□ 0.37
MKS1-204ENST00000537529 MMRN2Q9H8L6 949 aa17.33■□□□□ 0.37
MKS1-204ENST00000537529 NHEJ1Q9H9Q4 299 aaPredicted RBP17.33■□□□□ 0.37
MKS1-204ENST00000537529 TUFT1Q9NNX1 390 aa17.33■□□□□ 0.37
MKS1-204ENST00000537529 CDC23Q9UJX2 597 aa17.33■□□□□ 0.37
MKS1-204ENST00000537529 EIF3CLB5ME19 914 aaKnown RBP17.33■□□□□ 0.36
MKS1-204ENST00000537529 HNRNPH3P31942 346 aaKnown RBP17.33■□□□□ 0.36
MKS1-204ENST00000537529 HERVK_113P62684 666 aa17.33■□□□□ 0.36
MKS1-204ENST00000537529 CYP4A11Q02928 519 aa17.33■□□□□ 0.36
MKS1-204ENST00000537529 TNFAIP1Q13829 316 aa17.33■□□□□ 0.36
MKS1-204ENST00000537529 LRCH2Q5VUJ6 765 aa17.33■□□□□ 0.36
MKS1-204ENST00000537529 ZC3H3Q8IXZ2 948 aaKnown RBP17.33■□□□□ 0.36
MKS1-204ENST00000537529 TBC1D5Q92609 795 aa17.33■□□□□ 0.36
MKS1-204ENST00000537529 SLC5A5Q92911 643 aa17.33■□□□□ 0.36
MKS1-204ENST00000537529 EIF3CQ99613 913 aaKnown RBP17.33■□□□□ 0.36
MKS1-204ENST00000537529 REEP2Q9BRK0 252 aa17.33■□□□□ 0.36
MKS1-204ENST00000537529 EDEM3Q9BZQ6 932 aa17.33■□□□□ 0.36
MKS1-204ENST00000537529 FAM207AQ9NSI2 230 aaPredicted RBP17.33■□□□□ 0.36
MKS1-204ENST00000537529 ARGLU1Q9NWB6 273 aaPredicted RBP17.33■□□□□ 0.36
MKS1-204ENST00000537529 RABGAP1Q9Y3P9 1069 aa17.33■□□□□ 0.36
MKS1-204ENST00000537529 TBCAO75347 108 aaKnown RBP17.32■□□□□ 0.36
MKS1-204ENST00000537529 MARSP56192 900 aaKnown RBP17.32■□□□□ 0.36
MKS1-204ENST00000537529 SETQ01105 290 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms