RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 FAM214BQ7L5A3 538 aa3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 NPAS4Q8IUM7 802 aa3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 FBXO15Q8NCQ5 510 aaPredicted RBP3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 ZNF507Q8TCN5 953 aa3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 GRIN3AQ8TCU5 1115 aa3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 U2AF1L4Q8WU68 220 aaKnown RBP3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 OPTNQ96CV9 577 aa3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 CCDC120Q96HB5 630 aa3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 ZBED3Q96IU2 234 aaPredicted RBP3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 PAWRQ96IZ0 340 aaKnown RBP3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 HSPA12BQ96MM6 686 aa3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 HTATIP2Q9BUP3 242 aa3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 NSUN3Q9H649 340 aaKnown RBP3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 BIN2Q9UBW5 565 aaPredicted RBP3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 CPA4Q9UI42 421 aa3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 MAPK8IP1Q9UQF2 711 aa3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 JAG2Q9Y219 1238 aa3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 IBTKQ9P2D0 1353 aaPredicted RBP3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 ARFGEF2Q9Y6D5 1785 aa3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 PRAMEF27A3QJZ7 478 aa3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 H3BS24 57 aa3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 SNAP23O00161 211 aa3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 IRS4O14654 1257 aaPredicted RBP3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 FANCGO15287 622 aa3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 LRIG2O94898 1065 aa3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 EOMESO95936 686 aa3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 GJB1P08034 283 aa3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 ZBTB48P10074 688 aaPredicted RBP3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 RAC2P15153 192 aa3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 GRK4P32298 578 aa3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 MAGEA10P43363 369 aaPredicted RBP3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 PSMC4P43686 418 aa3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 LACTBP83111 547 aaPredicted RBP3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 MAP3K11Q16584 847 aa3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 SFRP5Q5T4F7 317 aa3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 ARMCX6Q7L4S7 300 aa3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 TMC4Q7Z404 712 aa3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 C7orf61Q8IZ16 206 aa3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 CERS5Q8N5B7 392 aa3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 CCER1Q8TC90 406 aaPredicted RBP3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 ALKBH8Q96BT7 664 aaKnown RBP3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 PRMT6Q96LA8 375 aaPredicted RBP3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 NECAB3Q96P71 396 aaPredicted RBP3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 MIPEPQ99797 713 aa3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 CEP44Q9C0F1 390 aa3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 VEZTQ9HBM0 779 aa3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 ATP13A1Q9HD20 1204 aa3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 PODXL2Q9NZ53 605 aa3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 GABRQQ9UN88 632 aa3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 RIPOR2Q9Y4F9 1068 aa3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 AKAP11Q9UKA4 1901 aa3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 IRS2Q9Y4H2 1338 aa3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 UBR2Q8IWV8 1755 aa3.89□□□□□ -1.79
CHMP4A-208ENST00000534106 PNMA6FA0A0J9YX94 578 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 TCAF2A6NFQ2 919 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 B8ZZF3 427 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 BTBD19C9JJ37 291 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 NPIPB6E9PJ23 425 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 TLR2O60603 784 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 SGPL1O95470 568 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 CBX7O95931 251 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 BMP8BP34820 402 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 GDNFP39905 211 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 FGD1P98174 961 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 PLCB3Q01970 1234 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 PRKCZQ05513 592 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 ZNF252P-AS1Q0IIN9 211 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 RASA3Q14644 834 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 DLGAP5Q15398 846 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 LRIT3Q3SXY7 679 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 ZBTB37Q5TC79 503 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 TTLL5Q6EMB2 1281 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 LLGL2Q6P1M3 1020 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 UBE3DQ7Z6J8 389 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 SIAH1Q8IUQ4 282 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 MFSD4AQ8N468 514 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 RAET1EQ8TD07 263 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 DEFB118Q96PH6 123 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 CDX2Q99626 313 aaPredicted RBP3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 ISCA1Q9BUE6 129 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 RBCK1Q9BYM8 510 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 EPB41L4BQ9H329 900 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 DCP1AQ9NPI6 582 aaPredicted RBP3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 SRRDQ9UH36 339 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 MINPP1Q9UNW1 487 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 RPTORQ8N122 1335 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 SSC5DA1L4H1 1573 aa3.88□□□□□ -1.79
CHMP4A-208ENST00000534106 DNAH12Q6ZR08 3092 aa3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 A0A1W2PPC1 479 aa3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 PRR33A8MZF0 331 aa3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 HTATSF1O43719 755 aaKnown RBP3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 FBXO24O75426 580 aa3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 BMP6P22004 513 aa3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 GSTT1P30711 240 aa3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 GTF2A2P52657 109 aa3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 ETF1P62495 437 aaKnown RBP3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 VGLL4Q14135 290 aa3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 KIF22Q14807 665 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms