RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 LRCH3Q96II8 777 aa14.79□□□□□ -0.04
TRAPPC4-212ENST00000533058 SPATA33Q96N06 139 aa14.79□□□□□ -0.04
TRAPPC4-212ENST00000533058 TRMT13Q9NUP7 481 aaKnown RBP14.79□□□□□ -0.04
TRAPPC4-212ENST00000533058 RTEL1Q9NZ71 1219 aa14.79□□□□□ -0.04
TRAPPC4-212ENST00000533058 UBIAD1Q9Y5Z9 338 aa14.79□□□□□ -0.04
TRAPPC4-212ENST00000533058 SMCO2A6NFE2 343 aa14.78□□□□□ -0.04
TRAPPC4-212ENST00000533058 PITPNM1O00562 1244 aa14.78□□□□□ -0.04
TRAPPC4-212ENST00000533058 CSF2RAP15509 400 aa14.78□□□□□ -0.04
TRAPPC4-212ENST00000533058 XBP1P17861 261 aa14.78□□□□□ -0.04
TRAPPC4-212ENST00000533058 CLK2P49760 499 aaKnown RBP14.78□□□□□ -0.04
TRAPPC4-212ENST00000533058 ADCY7P51828 1080 aa14.78□□□□□ -0.04
TRAPPC4-212ENST00000533058 FOSBP53539 338 aa14.78□□□□□ -0.04
TRAPPC4-212ENST00000533058 ST3GAL1Q11201 340 aa14.78□□□□□ -0.04
TRAPPC4-212ENST00000533058 AP3B2Q13367 1082 aa14.78□□□□□ -0.04
TRAPPC4-212ENST00000533058 PKN1Q16512 942 aa14.78□□□□□ -0.04
TRAPPC4-212ENST00000533058 UBE2SQ16763 222 aa14.78□□□□□ -0.04
TRAPPC4-212ENST00000533058 MCTP2Q6DN12 878 aa14.78□□□□□ -0.04
TRAPPC4-212ENST00000533058 FAM109BQ6ICB4 259 aaPredicted RBP14.78□□□□□ -0.04
TRAPPC4-212ENST00000533058 C16orf59Q7L2K0 433 aa14.78□□□□□ -0.04
TRAPPC4-212ENST00000533058 FAM184AQ8NB25 1140 aa14.78□□□□□ -0.04
TRAPPC4-212ENST00000533058 CCDC148Q8NFR7 591 aa14.78□□□□□ -0.04
TRAPPC4-212ENST00000533058 ZFP91Q96JP5 570 aaPredicted RBP14.78□□□□□ -0.04
TRAPPC4-212ENST00000533058 LLPHQ9BRT6 129 aaKnown RBP14.78□□□□□ -0.04
TRAPPC4-212ENST00000533058 PPP1R12CQ9BZL4 782 aa14.78□□□□□ -0.04
TRAPPC4-212ENST00000533058 ZMYND12Q9H0C1 365 aa14.78□□□□□ -0.04
TRAPPC4-212ENST00000533058 VPS54Q9P1Q0 977 aa14.78□□□□□ -0.04
TRAPPC4-212ENST00000533058 STK36Q9NRP7 1315 aa14.77□□□□□ -0.04
TRAPPC4-212ENST00000533058 K7ELQ4 463 aaPredicted RBP14.77□□□□□ -0.05
TRAPPC4-212ENST00000533058 ITGB5P18084 799 aa14.77□□□□□ -0.05
TRAPPC4-212ENST00000533058 CYP2C18P33260 490 aa14.77□□□□□ -0.05
TRAPPC4-212ENST00000533058 PSEN2P49810 448 aa14.77□□□□□ -0.05
TRAPPC4-212ENST00000533058 NLRP5P59047 1200 aa14.77□□□□□ -0.05
TRAPPC4-212ENST00000533058 SMAD3P84022 425 aaKnown RBP14.77□□□□□ -0.05
TRAPPC4-212ENST00000533058 FAM47CQ5HY64 1035 aa14.77□□□□□ -0.05
TRAPPC4-212ENST00000533058 RASIP1Q5U651 963 aa14.77□□□□□ -0.05
TRAPPC4-212ENST00000533058 PSRC1Q6PGN9 363 aaPredicted RBP14.77□□□□□ -0.05
TRAPPC4-212ENST00000533058 C16orf70Q9BSU1 422 aa14.77□□□□□ -0.05
TRAPPC4-212ENST00000533058 ALG1Q9BT22 464 aa14.77□□□□□ -0.05
TRAPPC4-212ENST00000533058 IL23AQ9NPF7 189 aa14.77□□□□□ -0.05
TRAPPC4-212ENST00000533058 GTF2IRD1Q9UHL9 959 aa14.77□□□□□ -0.05
TRAPPC4-212ENST00000533058 UMODL1Q5DID0 1318 aa14.76□□□□□ -0.05
TRAPPC4-212ENST00000533058 HSP90AA1P07900 732 aaKnown RBP14.76□□□□□ -0.05
TRAPPC4-212ENST00000533058 CYP2C9P11712 490 aa14.76□□□□□ -0.05
TRAPPC4-212ENST00000533058 GNA11P29992 359 aa14.76□□□□□ -0.05
TRAPPC4-212ENST00000533058 HMGN5P82970 282 aaKnown RBP14.76□□□□□ -0.05
TRAPPC4-212ENST00000533058 RBL2Q08999 1139 aa14.76□□□□□ -0.05
TRAPPC4-212ENST00000533058 BFSP2Q13515 415 aa14.76□□□□□ -0.05
TRAPPC4-212ENST00000533058 TRIM29Q14134 588 aa14.76□□□□□ -0.05
TRAPPC4-212ENST00000533058 MFSD10Q14728 455 aa14.76□□□□□ -0.05
TRAPPC4-212ENST00000533058 KIAA0753Q2KHM9 967 aa14.76□□□□□ -0.05
TRAPPC4-212ENST00000533058 TMEM240Q5SV17 173 aa14.76□□□□□ -0.05
TRAPPC4-212ENST00000533058 CYFIP1Q7L576 1253 aa14.76□□□□□ -0.05
TRAPPC4-212ENST00000533058 RPUSD2Q8IZ73 545 aaKnown RBP14.76□□□□□ -0.05
TRAPPC4-212ENST00000533058 FAM177A1Q8N128 213 aaPredicted RBP14.76□□□□□ -0.05
TRAPPC4-212ENST00000533058 C7orf31Q8N865 590 aa14.76□□□□□ -0.05
TRAPPC4-212ENST00000533058 SNX21Q969T3 373 aa14.76□□□□□ -0.05
TRAPPC4-212ENST00000533058 RNPC3Q96LT9 517 aaKnown RBP14.76□□□□□ -0.05
TRAPPC4-212ENST00000533058 AIFM3Q96NN9 605 aa14.76□□□□□ -0.05
TRAPPC4-212ENST00000533058 CTAGE1Q96RT6 745 aa14.76□□□□□ -0.05
TRAPPC4-212ENST00000533058 GPR20Q99678 358 aa14.76□□□□□ -0.05
TRAPPC4-212ENST00000533058 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.76□□□□□ -0.053e-6■■□□□ 14
TRAPPC4-212ENST00000533058 WNT8AQ9H1J5 351 aa14.76□□□□□ -0.05
TRAPPC4-212ENST00000533058 C6orf50Q9HD87 102 aa14.76□□□□□ -0.05
TRAPPC4-212ENST00000533058 JADE2Q9NQC1 790 aa14.76□□□□□ -0.05
TRAPPC4-212ENST00000533058 SH3GLB2Q9NR46 395 aa14.76□□□□□ -0.05
TRAPPC4-212ENST00000533058 SMC3Q9UQE7 1217 aa14.76□□□□□ -0.05
TRAPPC4-212ENST00000533058 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.76□□□□□ -0.05
TRAPPC4-212ENST00000533058 H3BRB1 525 aa14.75□□□□□ -0.05
TRAPPC4-212ENST00000533058 NOP56O00567 594 aaKnown RBP14.75□□□□□ -0.05
TRAPPC4-212ENST00000533058 PFKMP08237 780 aa14.75□□□□□ -0.05
TRAPPC4-212ENST00000533058 KCNA2P16389 499 aa14.75□□□□□ -0.05
TRAPPC4-212ENST00000533058 RFC2P35250 354 aa14.75□□□□□ -0.05
TRAPPC4-212ENST00000533058 SREBF1P36956 1147 aa14.75□□□□□ -0.05
TRAPPC4-212ENST00000533058 MTMR1Q13613 665 aa14.75□□□□□ -0.05
TRAPPC4-212ENST00000533058 PTGISQ16647 500 aa14.75□□□□□ -0.05
TRAPPC4-212ENST00000533058 CAGE1Q8TC20 777 aa14.75□□□□□ -0.05
TRAPPC4-212ENST00000533058 MXRA8Q9BRK3 442 aa14.75□□□□□ -0.05
TRAPPC4-212ENST00000533058 ANO3Q9BYT9 981 aa14.75□□□□□ -0.05
TRAPPC4-212ENST00000533058 TUT1Q9H6E5 874 aaKnown RBP14.75□□□□□ -0.05
TRAPPC4-212ENST00000533058 BCAS3Q9H6U6 928 aa14.75□□□□□ -0.05
TRAPPC4-212ENST00000533058 FOXD4L1Q9NU39 408 aa14.75□□□□□ -0.05
TRAPPC4-212ENST00000533058 HDAC6Q9UBN7 1215 aa14.75□□□□□ -0.05
TRAPPC4-212ENST00000533058 KIF3AQ9Y496 699 aa14.75□□□□□ -0.05
TRAPPC4-212ENST00000533058 SZT2Q5T011 3432 aa14.75□□□□□ -0.05
TRAPPC4-212ENST00000533058 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.74□□□□□ -0.05
TRAPPC4-212ENST00000533058 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.74□□□□□ -0.05
TRAPPC4-212ENST00000533058 ATP9AO75110 1047 aa14.74□□□□□ -0.05
TRAPPC4-212ENST00000533058 PARNO95453 639 aaKnown RBP14.74□□□□□ -0.05
TRAPPC4-212ENST00000533058 FGBP02675 491 aa14.74□□□□□ -0.05
TRAPPC4-212ENST00000533058 LGALS2P05162 132 aa14.74□□□□□ -0.05
TRAPPC4-212ENST00000533058 CYP3A4P08684 503 aa14.74□□□□□ -0.05
TRAPPC4-212ENST00000533058 ZNF286BP0CG31 522 aa14.74□□□□□ -0.05
TRAPPC4-212ENST00000533058 FDPSP14324 419 aaKnown RBP14.74□□□□□ -0.05
TRAPPC4-212ENST00000533058 HOXC8P31273 242 aa14.74□□□□□ -0.05
TRAPPC4-212ENST00000533058 CCL23P55773 120 aa14.74□□□□□ -0.05
TRAPPC4-212ENST00000533058 CEP55Q53EZ4 464 aa14.74□□□□□ -0.05
TRAPPC4-212ENST00000533058 GDF6Q6KF10 455 aaPredicted RBP14.74□□□□□ -0.05
TRAPPC4-212ENST00000533058 ZNF365Q70YC5 407 aa14.74□□□□□ -0.05
TRAPPC4-212ENST00000533058 NIPA1Q7RTP0 329 aa14.74□□□□□ -0.05
TRAPPC4-212ENST00000533058 CCDC155Q8N6L0 562 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms