RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 ZMYND10O75800 440 aa16.71■□□□□ 0.27
PCDHA3-202ENST00000532566 ASNSP08243 561 aa16.71■□□□□ 0.27
PCDHA3-202ENST00000532566 CALRP27797 417 aaKnown RBP16.71■□□□□ 0.27
PCDHA3-202ENST00000532566 ALDH3A1P30838 453 aa16.71■□□□□ 0.27
PCDHA3-202ENST00000532566 CXCR5P32302 372 aa16.71■□□□□ 0.27
PCDHA3-202ENST00000532566 ADAMTS1Q9UHI8 967 aa16.71■□□□□ 0.27
PCDHA3-202ENST00000532566 RGS16O15492 202 aaPredicted RBP16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 LRRN2O75325 713 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 GNGT1P63211 74 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 MXRA7P84157 204 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 ARHGAP4P98171 946 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 C10orf76Q5T2E6 689 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 SP8Q8IXZ3 490 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 CCSER1Q9C0I3 900 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 SUGCTQ9HAC7 445 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 ADGRG1Q9Y653 693 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 HEXIM1O94992 359 aaKnown RBP16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 EPHB4P54760 987 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 BPIFB4P59827 614 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 PPARDQ03181 441 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 PTK2Q05397 1052 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 LINC00116Q8NCU8 138 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 SUGT1Q9Y2Z0 365 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 GFPT2O94808 682 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 FTCDO95954 541 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 AKR1B1P15121 316 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 CCDC6Q16204 474 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 RCSD1Q6JBY9 416 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 INTS8Q75QN2 995 aaKnown RBP16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 GUF1Q8N442 669 aaKnown RBP16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 MRRFQ96E11 262 aaKnown RBP16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 FAM20AQ96MK3 541 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 NRBP2Q9NSY0 501 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 FAM169AQ9Y6X4 670 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 DCCP43146 1447 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 RXRBP28702 533 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 NSFP46459 744 aaKnown RBP16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 CTTNQ14247 550 aaKnown RBP16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 KCNB1Q14721 858 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 QRICH1Q2TAL8 776 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 ZNF354CQ86Y25 554 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 RTKN2Q8IZC4 609 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 TTLL6Q8N841 843 aa16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 GJD4Q96KN9 370 aaPredicted RBP16.7■□□□□ 0.26
PCDHA3-202ENST00000532566 MESDQ14696 234 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 CDHR1Q96JP9 859 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 MXD3Q9BW11 206 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 SEPT9Q9UHD8 586 aaPredicted RBP16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 TRPC6Q9Y210 931 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 COMMD10Q9Y6G5 202 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 RIMS1Q86UR5 1692 aaKnown RBP16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 RICTORQ6R327 1708 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 E7EVH7 732 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 E9PMD0 336 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 PGRMC1O00264 195 aaKnown RBP16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 TDP2O95551 362 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 P4HA1P13674 534 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 MAP3K9P80192 1104 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 PPP2R5AQ15172 486 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 USP49Q70CQ1 688 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 CEP170P1Q96L14 293 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 CEP63Q96MT8 703 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 PCIF1Q9H4Z3 704 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 KMT5AQ9NQR1 393 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 TTC26A0AVF1 554 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 F5H6K3 240 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 ARHGAP25P42331 645 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 CASP7P55210 303 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 KLRC3Q07444 240 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 VPS72Q15906 364 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 ADGRF4Q8IZF3 695 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 METTL13Q8N6R0 699 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 IPO4Q8TEX9 1081 aaKnown RBP16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 SLC7A3Q8WY07 619 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 NDC80O14777 642 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 KCNJ6P48051 423 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 CCDC14Q49A88 953 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 ALKBH5Q6P6C2 394 aaKnown RBP16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 EPB41L5Q9HCM4 733 aa16.69■□□□□ 0.26
PCDHA3-202ENST00000532566 C21orf2O43822 256 aa16.68■□□□□ 0.26
PCDHA3-202ENST00000532566 MXI1P50539 228 aa16.68■□□□□ 0.26
PCDHA3-202ENST00000532566 C2orf54Q08AI8 447 aa16.68■□□□□ 0.26
PCDHA3-202ENST00000532566 TBC1D10BQ4KMP7 808 aaPredicted RBP16.68■□□□□ 0.26
PCDHA3-202ENST00000532566 CEP57Q86XR8 500 aa16.68■□□□□ 0.26
PCDHA3-202ENST00000532566 SMC6Q96SB8 1091 aa16.68■□□□□ 0.26
PCDHA3-202ENST00000532566 SHPRHQ149N8 1683 aa16.68■□□□□ 0.26
PCDHA3-202ENST00000532566 POTEB3A0JP26 581 aa16.68■□□□□ 0.26
PCDHA3-202ENST00000532566 POTECB2RU33 542 aa16.68■□□□□ 0.26
PCDHA3-202ENST00000532566 IFNB1P01574 187 aa16.68■□□□□ 0.26
PCDHA3-202ENST00000532566 PNMA6AP0CW24 399 aaPredicted RBP16.68■□□□□ 0.26
PCDHA3-202ENST00000532566 ATP1A2P50993 1020 aa16.68■□□□□ 0.26
PCDHA3-202ENST00000532566 CCZ1BP86790 482 aa16.68■□□□□ 0.26
PCDHA3-202ENST00000532566 CCZ1P86791 482 aaPredicted RBP16.68■□□□□ 0.26
PCDHA3-202ENST00000532566 COASYQ13057 564 aa16.68■□□□□ 0.26
PCDHA3-202ENST00000532566 POTEBQ6S5H4 581 aa16.68■□□□□ 0.26
PCDHA3-202ENST00000532566 TBC1D16Q8TBP0 767 aa16.68■□□□□ 0.26
PCDHA3-202ENST00000532566 GRK7Q8WTQ7 553 aa16.68■□□□□ 0.26
PCDHA3-202ENST00000532566 CAPS2Q9BXY5 557 aa16.68■□□□□ 0.26
PCDHA3-202ENST00000532566 ST7Q9NRC1 585 aa16.68■□□□□ 0.26
PCDHA3-202ENST00000532566 ANKFY1Q9P2R3 1169 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms