RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 KRBA2Q6ZNG9 492 aa12.33□□□□□ -0.43
PTPRK-221ENST00000532331 PKNOX2Q96KN3 472 aa12.33□□□□□ -0.43
PTPRK-221ENST00000532331 ZNF302Q9NR11 478 aa12.33□□□□□ -0.43
PTPRK-221ENST00000532331 POLIQ9UNA4 740 aa12.33□□□□□ -0.43
PTPRK-221ENST00000532331 LRRIQ1Q96JM4 1722 aa12.33□□□□□ -0.44
PTPRK-221ENST00000532331 PHKA2P46019 1235 aa12.33□□□□□ -0.44
PTPRK-221ENST00000532331 KCNJ6P48051 423 aa12.33□□□□□ -0.44
PTPRK-221ENST00000532331 CTTNQ14247 550 aaKnown RBP12.33□□□□□ -0.44
PTPRK-221ENST00000532331 PPP1R18Q6NYC8 613 aa12.33□□□□□ -0.44
PTPRK-221ENST00000532331 TMTC3Q6ZXV5 915 aa12.33□□□□□ -0.44
PTPRK-221ENST00000532331 STK17AQ9UEE5 414 aa12.33□□□□□ -0.44
PTPRK-221ENST00000532331 ANAPC4Q9UJX5 808 aa12.33□□□□□ -0.44
PTPRK-221ENST00000532331 MNAT1P51948 309 aa12.33□□□□□ -0.44
PTPRK-221ENST00000532331 PDZD4Q76G19 769 aaPredicted RBP12.33□□□□□ -0.44
PTPRK-221ENST00000532331 ELMOD1Q8N336 334 aa12.33□□□□□ -0.44
PTPRK-221ENST00000532331 GPRC5AQ8NFJ5 357 aa12.33□□□□□ -0.44
PTPRK-221ENST00000532331 CCT6BQ92526 530 aa12.33□□□□□ -0.44
PTPRK-221ENST00000532331 TEX13BQ9BXU2 312 aa12.33□□□□□ -0.44
PTPRK-221ENST00000532331 GBA2Q9HCG7 927 aaPredicted RBP12.33□□□□□ -0.44
PTPRK-221ENST00000532331 UBE2Q2LH0YL09 131 aa12.33□□□□□ -0.44
PTPRK-221ENST00000532331 TKFCQ3LXA3 575 aa12.33□□□□□ -0.44
PTPRK-221ENST00000532331 GPIHBP1Q8IV16 184 aa12.33□□□□□ -0.44
PTPRK-221ENST00000532331 OR8K1Q8NGG5 319 aa12.33□□□□□ -0.44
PTPRK-221ENST00000532331 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.33□□□□□ -0.44
PTPRK-221ENST00000532331 TRIM31Q9BZY9 425 aa12.33□□□□□ -0.44
PTPRK-221ENST00000532331 SLITRK6Q9H5Y7 841 aa12.33□□□□□ -0.44
PTPRK-221ENST00000532331 ATP6V0A4Q9HBG4 840 aa12.33□□□□□ -0.44
PTPRK-221ENST00000532331 TMEM63CQ9P1W3 806 aa12.33□□□□□ -0.44
PTPRK-221ENST00000532331 PHLPP2Q6ZVD8 1323 aa12.33□□□□□ -0.44
PTPRK-221ENST00000532331 SMC1BQ8NDV3 1235 aa12.33□□□□□ -0.44
PTPRK-221ENST00000532331 NUDT12Q9BQG2 462 aa12.33□□□□□ -0.44
PTPRK-221ENST00000532331 CSF1RP07333 972 aa12.32□□□□□ -0.44
PTPRK-221ENST00000532331 RABL6Q3YEC7 729 aaPredicted RBP12.32□□□□□ -0.44
PTPRK-221ENST00000532331 SPATA24Q86W54 205 aa12.32□□□□□ -0.44
PTPRK-221ENST00000532331 KLHL7Q8IXQ5 586 aa12.32□□□□□ -0.44
PTPRK-221ENST00000532331 MB21D1Q8N884 522 aa12.32□□□□□ -0.44
PTPRK-221ENST00000532331 NEDD1Q8NHV4 660 aa12.32□□□□□ -0.44
PTPRK-221ENST00000532331 PARVGQ9HBI0 331 aa12.32□□□□□ -0.44
PTPRK-221ENST00000532331 PCDHA7Q9UN72 937 aa12.32□□□□□ -0.44
PTPRK-221ENST00000532331 FLT1P17948 1338 aa12.32□□□□□ -0.44
PTPRK-221ENST00000532331 NEDD4P46934 1319 aa12.32□□□□□ -0.44
PTPRK-221ENST00000532331 NMT2O60551 498 aa12.32□□□□□ -0.44
PTPRK-221ENST00000532331 MYL7Q01449 175 aa12.32□□□□□ -0.44
PTPRK-221ENST00000532331 HADHQ16836 314 aaKnown RBP12.32□□□□□ -0.44
PTPRK-221ENST00000532331 TBC1D10CQ8IV04 446 aa12.32□□□□□ -0.44
PTPRK-221ENST00000532331 CCDC105Q8IYK2 499 aa12.32□□□□□ -0.44
PTPRK-221ENST00000532331 U2AF1L4Q8WU68 220 aaKnown RBP12.32□□□□□ -0.44
PTPRK-221ENST00000532331 NT5C1BQ96P26 610 aa12.32□□□□□ -0.44
PTPRK-221ENST00000532331 TMEM39BQ9GZU3 492 aa12.32□□□□□ -0.44
PTPRK-221ENST00000532331 CLIC4Q9Y696 253 aa12.32□□□□□ -0.44
PTPRK-221ENST00000532331 CTNND1O60716 968 aaKnown RBP12.32□□□□□ -0.44
PTPRK-221ENST00000532331 CRCPO75575 148 aa12.32□□□□□ -0.44
PTPRK-221ENST00000532331 TFRCP02786 760 aaKnown RBP12.32□□□□□ -0.44
PTPRK-221ENST00000532331 NSUN7Q8NE18 718 aaKnown RBP12.32□□□□□ -0.44
PTPRK-221ENST00000532331 PLSCR1O15162 318 aa12.32□□□□□ -0.44
PTPRK-221ENST00000532331 PSMC2P35998 433 aaKnown RBP12.32□□□□□ -0.44
PTPRK-221ENST00000532331 MMP14P50281 582 aa12.32□□□□□ -0.44
PTPRK-221ENST00000532331 CACNB1Q02641 598 aaPredicted RBP12.32□□□□□ -0.44
PTPRK-221ENST00000532331 LDHDQ86WU2 507 aa12.32□□□□□ -0.44
PTPRK-221ENST00000532331 ZBTB9Q96C00 473 aa12.32□□□□□ -0.44
PTPRK-221ENST00000532331 TOPORSQ9NS56 1045 aaPredicted RBP12.32□□□□□ -0.44
PTPRK-221ENST00000532331 AMFRQ9UKV5 643 aa12.32□□□□□ -0.44
PTPRK-221ENST00000532331 PCDHB4Q9Y5E5 795 aa12.32□□□□□ -0.44
PTPRK-221ENST00000532331 VIMP08670 466 aaKnown RBP12.32□□□□□ -0.44
PTPRK-221ENST00000532331 TXNP10599 105 aaKnown RBP12.32□□□□□ -0.44
PTPRK-221ENST00000532331 BPIFB4P59827 614 aa12.32□□□□□ -0.44
PTPRK-221ENST00000532331 GEN1Q17RS7 908 aa12.32□□□□□ -0.44
PTPRK-221ENST00000532331 PPP2R3CQ969Q6 453 aa12.32□□□□□ -0.44
PTPRK-221ENST00000532331 SLC12A6Q9UHW9 1150 aa12.32□□□□□ -0.44
PTPRK-221ENST00000532331 SYNJ2BP-COX16A0A087WUM0 186 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 HPDP32754 393 aaPredicted RBP12.31□□□□□ -0.44
PTPRK-221ENST00000532331 PRELPP51888 382 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 MFAP3P55082 362 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 PAK2Q13177 524 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 PPP2R5DQ14738 602 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 QRICH1Q2TAL8 776 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 SLFN12LQ6IEE8 588 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 INTS8Q75QN2 995 aaKnown RBP12.31□□□□□ -0.44
PTPRK-221ENST00000532331 ADGRF4Q8IZF3 695 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 COX16Q9P0S2 106 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 FEZ2Q9UHY8 353 aaPredicted RBP12.31□□□□□ -0.44
PTPRK-221ENST00000532331 SCAF8Q9UPN6 1271 aaKnown RBP12.31□□□□□ -0.44
PTPRK-221ENST00000532331 GOLGA6CA6NDK9 693 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 GOLGA6BA6NDN3 693 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 SLC25A27O95847 323 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 C6orf222P0C671 652 aaPredicted RBP12.31□□□□□ -0.44
PTPRK-221ENST00000532331 GOLGA6DP0CG33 693 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 XPAP23025 273 aaPredicted RBP12.31□□□□□ -0.44
PTPRK-221ENST00000532331 SFNP31947 248 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 PTK2Q05397 1052 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 GRM4Q14833 912 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 SLFNL1Q499Z3 407 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 C12orf60Q5U649 245 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 USP17L6PQ6QN14 398 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 MCPH1Q8NEM0 835 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 MRRFQ96E11 262 aaKnown RBP12.31□□□□□ -0.44
PTPRK-221ENST00000532331 GOLGA6AQ9NYA3 693 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 OGFRQ9NZT2 677 aa12.31□□□□□ -0.44
PTPRK-221ENST00000532331 ADKP55263 362 aaKnown RBP12.31□□□□□ -0.44
PTPRK-221ENST00000532331 ITKQ08881 620 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms