RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 ZNF653Q96CK0 615 aa9.21□□□□□ -0.93
CTNND1-221ENST00000529873 ZNF215Q9UL58 517 aaPredicted RBP9.21□□□□□ -0.93
CTNND1-221ENST00000529873 PRKAB2O43741 272 aa9.21□□□□□ -0.94
CTNND1-221ENST00000529873 CDC37Q16543 378 aaPredicted RBP9.21□□□□□ -0.94
CTNND1-221ENST00000529873 MUM1Q2TAK8 710 aa9.21□□□□□ -0.94
CTNND1-221ENST00000529873 TMCO4Q5TGY1 634 aa9.21□□□□□ -0.94
CTNND1-221ENST00000529873 BBS5Q8N3I7 341 aa9.21□□□□□ -0.94
CTNND1-221ENST00000529873 ANTXR1Q9H6X2 564 aa9.21□□□□□ -0.94
CTNND1-221ENST00000529873 GSTA1P08263 222 aa9.21□□□□□ -0.94
CTNND1-221ENST00000529873 GSTA2P09210 222 aa9.21□□□□□ -0.94
CTNND1-221ENST00000529873 SURF1Q15526 300 aa9.21□□□□□ -0.94
CTNND1-221ENST00000529873 CCHCR1Q8TD31 782 aa9.21□□□□□ -0.94
CTNND1-221ENST00000529873 PBKQ96KB5 322 aa9.21□□□□□ -0.94
CTNND1-221ENST00000529873 TRIM4Q9C037 500 aa9.21□□□□□ -0.94
CTNND1-221ENST00000529873 SRPRBQ9Y5M8 271 aaKnown RBP9.21□□□□□ -0.94
CTNND1-221ENST00000529873 USP17L3A6NCW0 530 aa9.21□□□□□ -0.94
CTNND1-221ENST00000529873 USP17L4A6NCW7 530 aa9.21□□□□□ -0.94
CTNND1-221ENST00000529873 SPECC1L-ADORA2AF8WAN1 911 aa9.21□□□□□ -0.94
CTNND1-221ENST00000529873 SERPING1P05155 500 aa9.21□□□□□ -0.94
CTNND1-221ENST00000529873 RXRBP28702 533 aa9.21□□□□□ -0.94
CTNND1-221ENST00000529873 SLC8A1P32418 973 aa9.21□□□□□ -0.94
CTNND1-221ENST00000529873 YWHAGP61981 247 aaKnown RBP eCLIP9.21□□□□□ -0.94
CTNND1-221ENST00000529873 EHHADHQ08426 723 aa9.21□□□□□ -0.94
CTNND1-221ENST00000529873 USP17L1Q7RTZ2 530 aa9.21□□□□□ -0.94
CTNND1-221ENST00000529873 LRRC43Q8N309 656 aa9.21□□□□□ -0.94
CTNND1-221ENST00000529873 PI4KBQ9UBF8 816 aa9.21□□□□□ -0.94
CTNND1-221ENST00000529873 MAD1L1Q9Y6D9 718 aa9.21□□□□□ -0.94
CTNND1-221ENST00000529873 GLI2P10070 1586 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 SPHKAPQ2M3C7 1700 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 QRICH2Q9H0J4 1663 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 PLA2R1Q13018 1463 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 VPS41P49754 854 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 GUCY2DQ02846 1103 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 C11orf57Q6ZUT1 292 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-221ENST00000529873 SLC38A10Q9HBR0 1119 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 PIH1D3Q9NQM4 214 aaKnown RBP9.2□□□□□ -0.94
CTNND1-221ENST00000529873 GCNT4Q9P109 453 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 RIPOR2Q9Y4F9 1068 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 ZSCAN20P17040 1043 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-221ENST00000529873 LRRC41Q15345 812 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 KRT27Q7Z3Y8 459 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 RASEFQ8IZ41 740 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 MORC4Q8TE76 937 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 PAGE5Q96GU1 130 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 CEP170P1Q96L14 293 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 PCIF1Q9H4Z3 704 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 MYO1FO00160 1098 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 INHBAP08476 426 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 IL9RQ01113 521 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 CACNB1Q02641 598 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-221ENST00000529873 RTKN2Q8IZC4 609 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 SLC35F6Q8N357 371 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 CXorf38Q8TB03 319 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 COA7Q96BR5 231 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 SF3A3Q12874 501 aaKnown RBP eCLIP9.2□□□□□ -0.942e-7■■■□□ 14.9
CTNND1-221ENST00000529873 MYO1EQ12965 1108 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 UBE2SQ16763 222 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 ZBTB33Q86T24 672 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 TRIM42Q8IWZ5 723 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 ABI1Q8IZP0 508 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 USP6NLQ92738 828 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 UBE2TQ9NPD8 197 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-221ENST00000529873 SLC12A6Q9UHW9 1150 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 NOC2LQ9Y3T9 749 aaKnown RBP9.2□□□□□ -0.94
CTNND1-221ENST00000529873 CLTCL1P53675 1640 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 MEIS1O00470 390 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 MCF2LO15068 1137 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 CLIC2O15247 247 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 HIP1RO75146 1068 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 ECEL1O95672 775 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 USP17L8P0C7I0 530 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 SLFN14P0C7P3 912 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 PLA2G4BP0C869 781 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 IREB2P48200 963 aaKnown RBP9.2□□□□□ -0.94
CTNND1-221ENST00000529873 C2orf54Q08AI8 447 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 PPP4R3CPQ6ZMV5 832 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 LINC00301Q8NCQ3 95 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 COA1Q9GZY4 146 aa9.2□□□□□ -0.94
CTNND1-221ENST00000529873 NHEJ1Q9H9Q4 299 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-221ENST00000529873 MRPL47Q9HD33 250 aaKnown RBP9.2□□□□□ -0.94
CTNND1-221ENST00000529873 ARHGEF37A1IGU5 675 aa9.19□□□□□ -0.94
CTNND1-221ENST00000529873 MOCS3O95396 460 aa9.19□□□□□ -0.94
CTNND1-221ENST00000529873 CPP00450 1065 aa9.19□□□□□ -0.94
CTNND1-221ENST00000529873 SAT1P21673 171 aa9.19□□□□□ -0.94
CTNND1-221ENST00000529873 CDK8P49336 464 aa9.19□□□□□ -0.94
CTNND1-221ENST00000529873 ATP1A2P50993 1020 aa9.19□□□□□ -0.94
CTNND1-221ENST00000529873 EPHB4P54760 987 aa9.19□□□□□ -0.94
CTNND1-221ENST00000529873 ETF1P62495 437 aaKnown RBP9.19□□□□□ -0.94
CTNND1-221ENST00000529873 RAPH1Q70E73 1250 aa9.19□□□□□ -0.94
CTNND1-221ENST00000529873 FAM133AQ8N9E0 248 aa9.19□□□□□ -0.94
CTNND1-221ENST00000529873 KCTD6Q8NC69 237 aa9.19□□□□□ -0.94
CTNND1-221ENST00000529873 HDAC11Q96DB2 347 aa9.19□□□□□ -0.94
CTNND1-221ENST00000529873 DYNLL2Q96FJ2 89 aa9.19□□□□□ -0.94
CTNND1-221ENST00000529873 LRGUKQ96M69 825 aa9.19□□□□□ -0.94
CTNND1-221ENST00000529873 SERPINB13Q9UIV8 391 aa9.19□□□□□ -0.94
CTNND1-221ENST00000529873 CDC23Q9UJX2 597 aa9.19□□□□□ -0.94
CTNND1-221ENST00000529873 PALLDQ8WX93 1383 aa9.19□□□□□ -0.94
CTNND1-221ENST00000529873 PTPN12Q05209 780 aaKnown RBP9.19□□□□□ -0.94
CTNND1-221ENST00000529873 SGO2Q562F6 1265 aa9.19□□□□□ -0.94
CTNND1-221ENST00000529873 TAB3Q8N5C8 712 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms