RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 BAP1Q92560 729 aa11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 LENG9Q96B70 501 aa11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 GMCL1Q96IK5 515 aa11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 CCDC42Q96M95 316 aa11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 BMP2KQ9NSY1 1161 aaPredicted RBP11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 RAB21Q9UL25 225 aa11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 YDJCA8MPS7 323 aa11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 NPM3O75607 178 aaKnown RBP11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 IPO7O95373 1038 aaKnown RBP11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 HOXA13P31271 388 aaPredicted RBP11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 SLC12A3P55017 1021 aa11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 PSMC6P62333 389 aa11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 KCNMA1Q12791 1236 aa11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 HERC4Q5GLZ8 1057 aaPredicted RBP11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 RRAGAQ7L523 313 aa11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 C7orf43Q8WVR3 580 aa11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 PURBQ96QR8 312 aaKnown RBP11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 UBXN6Q9BZV1 441 aa11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 TANGO6Q9C0B7 1094 aa11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 COL4A3BPQ9Y5P4 624 aa11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 MEIS1O00470 390 aa11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 BMP3P12645 472 aa11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 EIF4A3P38919 411 aaKnown RBP11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 VAV2P52735 878 aa11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 VSNL1P62760 191 aa11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 FKBP3Q00688 224 aaKnown RBP11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 PAPD7Q5XG87 772 aaKnown RBP11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 CATSPER3Q86XQ3 398 aa11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 CCDC65Q8IXS2 484 aa11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 SLFN12Q8IYM2 578 aa11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 SCFD1Q8WVM8 642 aa11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 ATRNL1Q5VV63 1379 aa11.92□□□□□ -0.5
RAB11FIP1-204ENST00000522774 CCDC40Q4G0X9 1142 aa11.91□□□□□ -0.5
RAB11FIP1-204ENST00000522774 FOXR2Q6PJQ5 311 aa11.91□□□□□ -0.5
RAB11FIP1-204ENST00000522774 MOXD1Q6UVY6 613 aa11.91□□□□□ -0.5
RAB11FIP1-204ENST00000522774 CCDC84Q86UT8 332 aaPredicted RBP11.91□□□□□ -0.5
RAB11FIP1-204ENST00000522774 CYP2W1Q8TAV3 490 aa11.91□□□□□ -0.5
RAB11FIP1-204ENST00000522774 IQCDQ96DY2 449 aa11.91□□□□□ -0.5
RAB11FIP1-204ENST00000522774 CSRNP1Q96S65 589 aa11.91□□□□□ -0.5
RAB11FIP1-204ENST00000522774 MMS19Q96T76 1030 aa11.91□□□□□ -0.5
RAB11FIP1-204ENST00000522774 ZHX3Q9H4I2 956 aa11.91□□□□□ -0.5
RAB11FIP1-204ENST00000522774 SAR1BQ9Y6B6 198 aa11.91□□□□□ -0.5
RAB11FIP1-204ENST00000522774 SPATA31C1P0DKV0 1188 aa11.91□□□□□ -0.5
RAB11FIP1-204ENST00000522774 KIF11P52732 1056 aa11.91□□□□□ -0.5
RAB11FIP1-204ENST00000522774 KIAA1755Q5JYT7 1200 aa11.91□□□□□ -0.5
RAB11FIP1-204ENST00000522774 BEND6Q5SZJ8 279 aaPredicted RBP11.91□□□□□ -0.5
RAB11FIP1-204ENST00000522774 RBM26Q5T8P6 1007 aaKnown RBP11.91□□□□□ -0.5
RAB11FIP1-204ENST00000522774 CAPZA3Q96KX2 299 aa11.91□□□□□ -0.5
RAB11FIP1-204ENST00000522774 KCTD10Q9H3F6 313 aa11.91□□□□□ -0.5
RAB11FIP1-204ENST00000522774 SUGCTQ9HAC7 445 aa11.91□□□□□ -0.5
RAB11FIP1-204ENST00000522774 POTEB2H3BUK9 544 aa11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 HOXA7P31268 230 aaPredicted RBP11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 SREBF1P36956 1147 aa11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 ECE1P42892 770 aa11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 CASP5P51878 434 aa11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 APBA1Q02410 837 aa11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 KIF5AQ12840 1032 aa11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 PABPC4Q13310 644 aaKnown RBP eCLIP11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 SPA17Q15506 151 aa11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 Q4G0T1 1027 aa11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 PDXDC1Q6P996 788 aa11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 ZNF771Q7L3S4 317 aaPredicted RBP11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 EHBP1Q8NDI1 1231 aa11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 MLXIPQ9HAP2 919 aa11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 ABCB6Q9NP58 842 aa11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 RNF216Q9NWF9 866 aaPredicted RBP11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 FRMD3A2A2Y4 597 aa11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 SPDYE3A6NKU9 549 aa11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 ZNF185O15231 689 aa11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 POLR3GO15318 223 aaPredicted RBP11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 ENTPD3O75355 529 aa11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 KRT18P05783 430 aaKnown RBP11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 MMP14P50281 582 aa11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 NEK11Q8NG66 645 aa11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 IFIH1Q9BYX4 1025 aaKnown RBP11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 NLRC4Q9NPP4 1024 aa11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 EMILIN3Q9NT22 766 aa11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 PCDHA13Q9Y5I0 950 aa11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 CAPN6Q9Y6Q1 641 aa11.9□□□□□ -0.5
RAB11FIP1-204ENST00000522774 TCP10L2B9ZVM9 353 aa11.9□□□□□ -0.51
RAB11FIP1-204ENST00000522774 MSH4O15457 936 aa11.9□□□□□ -0.51
RAB11FIP1-204ENST00000522774 NOL4O94818 638 aa11.9□□□□□ -0.51
RAB11FIP1-204ENST00000522774 SMC1AQ14683 1233 aaKnown RBP11.9□□□□□ -0.51
RAB11FIP1-204ENST00000522774 HAUS3Q68CZ6 603 aa11.9□□□□□ -0.51
RAB11FIP1-204ENST00000522774 SLC30A10Q6XR72 485 aa11.9□□□□□ -0.51
RAB11FIP1-204ENST00000522774 TRIM59Q8IWR1 403 aa11.9□□□□□ -0.51
RAB11FIP1-204ENST00000522774 HNRNPLLQ8WVV9 542 aaKnown RBP11.9□□□□□ -0.51
RAB11FIP1-204ENST00000522774 SECISBP2LQ93073 1101 aaKnown RBP11.9□□□□□ -0.51
RAB11FIP1-204ENST00000522774 ZBTB9Q96C00 473 aa11.9□□□□□ -0.51
RAB11FIP1-204ENST00000522774 CRACR2AQ9BSW2 395 aa11.9□□□□□ -0.51
RAB11FIP1-204ENST00000522774 BCAS3Q9H6U6 928 aa11.9□□□□□ -0.51
RAB11FIP1-204ENST00000522774 ZCCHC17Q9NP64 241 aaKnown RBP11.9□□□□□ -0.51
RAB11FIP1-204ENST00000522774 PRR12Q9ULL5 1215 aa11.9□□□□□ -0.51
RAB11FIP1-204ENST00000522774 CLRN2A0PK11 232 aa11.89□□□□□ -0.51
RAB11FIP1-204ENST00000522774 MAP2K7O14733 419 aa11.89□□□□□ -0.51
RAB11FIP1-204ENST00000522774 PPIP5K2O43314 1243 aa11.89□□□□□ -0.51
RAB11FIP1-204ENST00000522774 OAS2P29728 719 aaKnown RBP11.89□□□□□ -0.51
RAB11FIP1-204ENST00000522774 CYP4A11Q02928 519 aa11.89□□□□□ -0.51
RAB11FIP1-204ENST00000522774 GIT2Q14161 759 aa11.89□□□□□ -0.51
RAB11FIP1-204ENST00000522774 CC2D2BQ6DHV5 1058 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms