RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 CACTINQ8WUQ7 758 aaKnown RBP17.63■□□□□ 0.41
USP42-207ENST00000521713 FANCLQ9NW38 375 aa17.63■□□□□ 0.41
USP42-207ENST00000521713 DIP2BQ9P265 1576 aa17.63■□□□□ 0.41
USP42-207ENST00000521713 PLEKHA8P1O95397 391 aa17.63■□□□□ 0.41
USP42-207ENST00000521713 TCP1P17987 556 aaKnown RBP17.63■□□□□ 0.41
USP42-207ENST00000521713 JAK3P52333 1124 aa17.63■□□□□ 0.41
USP42-207ENST00000521713 PKP1Q13835 747 aa17.63■□□□□ 0.41
USP42-207ENST00000521713 VPS52Q8N1B4 723 aa17.63■□□□□ 0.41
USP42-207ENST00000521713 ZNF710Q8N1W2 664 aa17.63■□□□□ 0.41
USP42-207ENST00000521713 ANKRD36BP1Q96IX9 119 aa17.63■□□□□ 0.41
USP42-207ENST00000521713 ASIC3Q9UHC3 531 aa17.63■□□□□ 0.41
USP42-207ENST00000521713 ABCB11O95342 1321 aa17.63■□□□□ 0.41
USP42-207ENST00000521713 EEF1GP26641 437 aaKnown RBP17.63■□□□□ 0.41
USP42-207ENST00000521713 HOXA13P31271 388 aaPredicted RBP17.63■□□□□ 0.41
USP42-207ENST00000521713 PTK2Q05397 1052 aa17.63■□□□□ 0.41
USP42-207ENST00000521713 PSMD2Q13200 908 aa17.63■□□□□ 0.41
USP42-207ENST00000521713 PRPF38AQ8NAV1 312 aaKnown RBP17.63■□□□□ 0.41
USP42-207ENST00000521713 NEDD1Q8NHV4 660 aa17.63■□□□□ 0.41
USP42-207ENST00000521713 PARVGQ9HBI0 331 aa17.63■□□□□ 0.41
USP42-207ENST00000521713 KIDINS220Q9ULH0 1771 aa17.63■□□□□ 0.41
USP42-207ENST00000521713 CSF1RP07333 972 aa17.62■□□□□ 0.41
USP42-207ENST00000521713 CEP95Q96GE4 821 aa17.62■□□□□ 0.41
USP42-207ENST00000521713 HYOU1Q9Y4L1 999 aa17.62■□□□□ 0.41
USP42-207ENST00000521713 PSMC4P43686 418 aa17.62■□□□□ 0.41
USP42-207ENST00000521713 MTERF2Q49AM1 385 aa17.62■□□□□ 0.41
USP42-207ENST00000521713 DENND2CQ68D51 928 aa17.62■□□□□ 0.41
USP42-207ENST00000521713 A0A0G2JLW4 131 aa17.62■□□□□ 0.41
USP42-207ENST00000521713 ORC4O43929 436 aa17.62■□□□□ 0.41
USP42-207ENST00000521713 PIK3CAP42336 1068 aa17.62■□□□□ 0.41
USP42-207ENST00000521713 ZNF131P52739 623 aa17.62■□□□□ 0.41
USP42-207ENST00000521713 MFAP3P55082 362 aa17.62■□□□□ 0.41
USP42-207ENST00000521713 PFKFB3Q16875 520 aaPredicted RBP17.62■□□□□ 0.41
USP42-207ENST00000521713 SRGAP1Q7Z6B7 1085 aa17.62■□□□□ 0.41
USP42-207ENST00000521713 SESTD1Q86VW0 696 aa17.62■□□□□ 0.41
USP42-207ENST00000521713 P2RX5Q93086 422 aa17.62■□□□□ 0.41
USP42-207ENST00000521713 FAM167AQ96KS9 214 aa17.62■□□□□ 0.41
USP42-207ENST00000521713 RMDN3Q96TC7 470 aa17.62■□□□□ 0.41
USP42-207ENST00000521713 LRFN2Q9ULH4 789 aa17.62■□□□□ 0.41
USP42-207ENST00000521713 POLR2FP61218 127 aaKnown RBP17.62■□□□□ 0.41
USP42-207ENST00000521713 ATG9AQ7Z3C6 839 aa17.62■□□□□ 0.41
USP42-207ENST00000521713 FAM186BQ8IYM0 893 aa17.62■□□□□ 0.41
USP42-207ENST00000521713 NSUN6Q8TEA1 469 aaKnown RBP17.62■□□□□ 0.41
USP42-207ENST00000521713 F5H6K3 240 aa17.61■□□□□ 0.41
USP42-207ENST00000521713 KLRC3Q07444 240 aa17.61■□□□□ 0.41
USP42-207ENST00000521713 KLHL14Q9P2G3 628 aa17.61■□□□□ 0.41
USP42-207ENST00000521713 DDX41Q9UJV9 622 aaKnown RBP17.61■□□□□ 0.41
USP42-207ENST00000521713 FAN1Q9Y2M0 1017 aa17.61■□□□□ 0.41
USP42-207ENST00000521713 BZW2Q9Y6E2 419 aaKnown RBP17.61■□□□□ 0.41
USP42-207ENST00000521713 GSG1L2A8MUP6 293 aa17.61■□□□□ 0.41
USP42-207ENST00000521713 H2AFZP0C0S5 128 aa17.61■□□□□ 0.41
USP42-207ENST00000521713 HHATQ5VTY9 493 aa17.61■□□□□ 0.41
USP42-207ENST00000521713 STYK1Q6J9G0 422 aa17.61■□□□□ 0.41
USP42-207ENST00000521713 H2AFVQ71UI9 128 aa17.61■□□□□ 0.41
USP42-207ENST00000521713 CNOT6LQ96LI5 555 aaKnown RBP17.61■□□□□ 0.41
USP42-207ENST00000521713 APOL6Q9BWW8 343 aa17.61■□□□□ 0.41
USP42-207ENST00000521713 JRKLQ9Y4A0 524 aa17.61■□□□□ 0.41
USP42-207ENST00000521713 CCDC151A5D8V7 595 aa17.61■□□□□ 0.41
USP42-207ENST00000521713 MYL7Q01449 175 aa17.61■□□□□ 0.41
USP42-207ENST00000521713 ITPK1Q13572 414 aa17.61■□□□□ 0.41
USP42-207ENST00000521713 MUM1Q2TAK8 710 aa17.61■□□□□ 0.41
USP42-207ENST00000521713 SNRNP48Q6IEG0 339 aaKnown RBP17.61■□□□□ 0.41
USP42-207ENST00000521713 PDZD4Q76G19 769 aaPredicted RBP17.61■□□□□ 0.41
USP42-207ENST00000521713 PLA2G4BP0C869 781 aa17.61■□□□□ 0.41
USP42-207ENST00000521713 RNASE9P60153 205 aaKnown RBP17.61■□□□□ 0.41
USP42-207ENST00000521713 SURF1Q15526 300 aa17.61■□□□□ 0.41
USP42-207ENST00000521713 PPP1R21Q6ZMI0 780 aa17.61■□□□□ 0.41
USP42-207ENST00000521713 ENAHQ8N8S7 591 aaPredicted RBP17.61■□□□□ 0.41
USP42-207ENST00000521713 TUBGCP2Q9BSJ2 902 aa17.61■□□□□ 0.41
USP42-207ENST00000521713 CDC23Q9UJX2 597 aa17.61■□□□□ 0.41
USP42-207ENST00000521713 PCDHA6Q9UN73 950 aa17.61■□□□□ 0.41
USP42-207ENST00000521713 PCDHA8Q9Y5H6 950 aa17.61■□□□□ 0.41
USP42-207ENST00000521713 MYO3AQ8NEV4 1616 aa17.6■□□□□ 0.41
USP42-207ENST00000521713 BCORL1Q5H9F3 1711 aa17.6■□□□□ 0.41
USP42-207ENST00000521713 FASTKD5Q7L8L6 764 aaKnown RBP17.6■□□□□ 0.41
USP42-207ENST00000521713 SLC44A5Q8NCS7 719 aa17.6■□□□□ 0.41
USP42-207ENST00000521713 TBC1D22BQ9NU19 505 aa17.6■□□□□ 0.41
USP42-207ENST00000521713 LRRD1A4D1F6 860 aa17.6■□□□□ 0.41
USP42-207ENST00000521713 COPB1P53618 953 aaKnown RBP17.6■□□□□ 0.41
USP42-207ENST00000521713 GRM4Q14833 912 aa17.6■□□□□ 0.41
USP42-207ENST00000521713 ZNF658Q5TYW1 1059 aaPredicted RBP17.6■□□□□ 0.41
USP42-207ENST00000521713 NLRP7Q8WX94 980 aa17.6■□□□□ 0.41
USP42-207ENST00000521713 RNF146Q9NTX7 359 aa17.6■□□□□ 0.41
USP42-207ENST00000521713 NEDD4P46934 1319 aa17.6■□□□□ 0.41
USP42-207ENST00000521713 PPANQ9NQ55 473 aaKnown RBP17.6■□□□□ 0.41
USP42-207ENST00000521713 RGS16O15492 202 aaPredicted RBP17.6■□□□□ 0.41
USP42-207ENST00000521713 STAM2O75886 525 aa17.6■□□□□ 0.41
USP42-207ENST00000521713 NTSR2O95665 410 aa17.6■□□□□ 0.41
USP42-207ENST00000521713 CTNNA1P35221 906 aaKnown RBP17.6■□□□□ 0.41
USP42-207ENST00000521713 NSFP46459 744 aaKnown RBP17.6■□□□□ 0.41
USP42-207ENST00000521713 ADKP55263 362 aaKnown RBP17.6■□□□□ 0.41
USP42-207ENST00000521713 ORC2Q13416 577 aaPredicted RBP17.6■□□□□ 0.41
USP42-207ENST00000521713 CCDC105Q8IYK2 499 aa17.6■□□□□ 0.41
USP42-207ENST00000521713 PYCARDQ9ULZ3 195 aa17.6■□□□□ 0.41
USP42-207ENST00000521713 FAM196BA6NMK8 535 aa17.59■□□□□ 0.41
USP42-207ENST00000521713 ABCB4P21439 1286 aa17.59■□□□□ 0.41
USP42-207ENST00000521713 SLC15A2Q16348 729 aa17.59■□□□□ 0.41
USP42-207ENST00000521713 KMT5BQ4FZB7 885 aa17.59■□□□□ 0.41
USP42-207ENST00000521713 ANKRD20A3Q5VUR7 823 aa17.59■□□□□ 0.41
USP42-207ENST00000521713 METTL23Q86XA0 190 aa17.59■□□□□ 0.41
USP42-207ENST00000521713 NSUN4Q96CB9 384 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms