RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 MEIS1O00470 390 aa20.56■□□□□ 0.88
TRAPPC9-210ENST00000521667 KCTD17Q8N5Z5 321 aa20.56■□□□□ 0.88
TRAPPC9-210ENST00000521667 PANX2Q96RD6 677 aa20.56■□□□□ 0.88
TRAPPC9-210ENST00000521667 RPTORQ8N122 1335 aa20.56■□□□□ 0.88
TRAPPC9-210ENST00000521667 PITPNM2Q9BZ72 1349 aa20.56■□□□□ 0.88
TRAPPC9-210ENST00000521667 TPM2P07951 284 aa20.56■□□□□ 0.88
TRAPPC9-210ENST00000521667 PSMC6P62333 389 aa20.56■□□□□ 0.88
TRAPPC9-210ENST00000521667 UBXN1Q04323 297 aa20.56■□□□□ 0.88
TRAPPC9-210ENST00000521667 PPP2R5CQ13362 524 aa20.56■□□□□ 0.88
TRAPPC9-210ENST00000521667 PTPN14Q15678 1187 aa20.56■□□□□ 0.88
TRAPPC9-210ENST00000521667 FAM26FQ5R3K3 315 aa20.56■□□□□ 0.88
TRAPPC9-210ENST00000521667 SAMD3Q8N6K7 520 aa20.56■□□□□ 0.88
TRAPPC9-210ENST00000521667 SYT2Q8N9I0 419 aaPredicted RBP20.56■□□□□ 0.88
TRAPPC9-210ENST00000521667 MAP3K20Q9NYL2 800 aaKnown RBP20.56■□□□□ 0.88
TRAPPC9-210ENST00000521667 COL20A1Q9P218 1284 aa20.56■□□□□ 0.88
TRAPPC9-210ENST00000521667 ZHX2Q9Y6X8 837 aa20.56■□□□□ 0.88
TRAPPC9-210ENST00000521667 SSC5DA1L4H1 1573 aa20.55■□□□□ 0.88
TRAPPC9-210ENST00000521667 CCP110O43303 1012 aa20.55■□□□□ 0.88
TRAPPC9-210ENST00000521667 CYP4A11Q02928 519 aa20.55■□□□□ 0.88
TRAPPC9-210ENST00000521667 LRRC63Q05C16 580 aa20.55■□□□□ 0.88
TRAPPC9-210ENST00000521667 SUPT20HL1Q3ZLR7 823 aa20.55■□□□□ 0.88
TRAPPC9-210ENST00000521667 ARSHQ5FYA8 562 aa20.55■□□□□ 0.88
TRAPPC9-210ENST00000521667 CEP135Q66GS9 1140 aa20.55■□□□□ 0.88
TRAPPC9-210ENST00000521667 PPP1R13BQ96KQ4 1090 aa20.55■□□□□ 0.88
TRAPPC9-210ENST00000521667 CNOT6LQ96LI5 555 aaKnown RBP20.55■□□□□ 0.88
TRAPPC9-210ENST00000521667 C12orf42Q96LP6 360 aa20.55■□□□□ 0.88
TRAPPC9-210ENST00000521667 MXRA8Q9BRK3 442 aa20.55■□□□□ 0.88
TRAPPC9-210ENST00000521667 ZNF577Q9BSK1 485 aa20.55■□□□□ 0.88
TRAPPC9-210ENST00000521667 NPHP3-ACAD11A0A0J9YXS1 232 aa20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 VWA5AO00534 786 aa20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 GAS7O60861 476 aa20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 MFAP3LO75121 409 aa20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 GYPCP04921 128 aa20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 KRT18P05783 430 aaKnown RBP20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 TPM1P09493 284 aa20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 PABPC4Q13310 644 aaKnown RBP eCLIP20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 TRIM14Q14142 442 aa20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 MUM1L1Q5H9M0 696 aa20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 FOXR2Q6PJQ5 311 aa20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 KRT26Q7Z3Y9 468 aa20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 MYOCDQ8IZQ8 938 aa20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 MB21D1Q8N884 522 aa20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 CPLX3Q8WVH0 158 aa20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 TUBGCP2Q9BSJ2 902 aa20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 TUFT1Q9NNX1 390 aa20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 HOMER2Q9NSB8 354 aa20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 FRMD3A2A2Y4 597 aa20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 C19orf81C9J6K1 198 aa20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 ARP10275 920 aa20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 LRRC41Q15345 812 aa20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 NOL9Q5SY16 702 aaKnown RBP20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 DLK2Q6UY11 383 aa20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 CNGA4Q8IV77 575 aa20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 GLIS3Q8NEA6 775 aa20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 ATG4CQ96DT6 458 aa20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 ZFP91Q96JP5 570 aaPredicted RBP20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 HSD17B14Q9BPX1 270 aa20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 WDR11Q9BZH6 1224 aa20.54■□□□□ 0.88
TRAPPC9-210ENST00000521667 A0A1W2PQC6 194 aa20.53■□□□□ 0.88
TRAPPC9-210ENST00000521667 FGFR1OPO95684 399 aaKnown RBP20.53■□□□□ 0.88
TRAPPC9-210ENST00000521667 PRKCSHP14314 528 aaPredicted RBP20.53■□□□□ 0.88
TRAPPC9-210ENST00000521667 CASP14P31944 242 aa20.53■□□□□ 0.88
TRAPPC9-210ENST00000521667 HMGCS2P54868 508 aa20.53■□□□□ 0.88
TRAPPC9-210ENST00000521667 CACNB1Q02641 598 aaPredicted RBP20.53■□□□□ 0.88
TRAPPC9-210ENST00000521667 HERC4Q5GLZ8 1057 aaPredicted RBP20.53■□□□□ 0.88
TRAPPC9-210ENST00000521667 SLC30A10Q6XR72 485 aa20.53■□□□□ 0.88
TRAPPC9-210ENST00000521667 ZNF507Q8TCN5 953 aa20.53■□□□□ 0.88
TRAPPC9-210ENST00000521667 SYTL5Q8TDW5 730 aaPredicted RBP20.53■□□□□ 0.88
TRAPPC9-210ENST00000521667 CCDC51Q96ER9 411 aa20.53■□□□□ 0.88
TRAPPC9-210ENST00000521667 EEF2KMTQ96G04 330 aa20.53■□□□□ 0.88
TRAPPC9-210ENST00000521667 RGL1Q9NZL6 768 aa20.53■□□□□ 0.88
TRAPPC9-210ENST00000521667 PCDHA2Q9Y5H9 948 aa20.53■□□□□ 0.88
TRAPPC9-210ENST00000521667 POLR2AP24928 1970 aaKnown RBP20.53■□□□□ 0.88
TRAPPC9-210ENST00000521667 UQCRHLA0A096LP55 91 aa20.53■□□□□ 0.88
TRAPPC9-210ENST00000521667 CHMP2AO43633 222 aa20.53■□□□□ 0.88
TRAPPC9-210ENST00000521667 EYA4O95677 639 aa20.53■□□□□ 0.88
TRAPPC9-210ENST00000521667 UQCRHP07919 91 aa20.53■□□□□ 0.88
TRAPPC9-210ENST00000521667 BCRP11274 1271 aa20.53■□□□□ 0.88
TRAPPC9-210ENST00000521667 TSG101Q99816 390 aa20.53■□□□□ 0.88
TRAPPC9-210ENST00000521667 NAA15Q9BXJ9 866 aaKnown RBP20.53■□□□□ 0.88
TRAPPC9-210ENST00000521667 PES1O00541 588 aaKnown RBP20.52■□□□□ 0.88
TRAPPC9-210ENST00000521667 ITGB5P18084 799 aa20.52■□□□□ 0.88
TRAPPC9-210ENST00000521667 MTIF2P46199 727 aaKnown RBP20.52■□□□□ 0.88
TRAPPC9-210ENST00000521667 DNM2P50570 870 aa20.52■□□□□ 0.88
TRAPPC9-210ENST00000521667 FXR1P51114 621 aaKnown RBP eCLIP20.52■□□□□ 0.88
TRAPPC9-210ENST00000521667 RAD51AP2Q09MP3 1159 aa20.52■□□□□ 0.88
TRAPPC9-210ENST00000521667 GIT2Q14161 759 aa20.52■□□□□ 0.88
TRAPPC9-210ENST00000521667 NIPA1Q7RTP0 329 aa20.52■□□□□ 0.88
TRAPPC9-210ENST00000521667 MYRIPQ8NFW9 859 aa20.52■□□□□ 0.88
TRAPPC9-210ENST00000521667 TRERF1Q96PN7 1200 aa20.52■□□□□ 0.88
TRAPPC9-210ENST00000521667 RIT2Q99578 217 aa20.52■□□□□ 0.88
TRAPPC9-210ENST00000521667 TEKT3Q9BXF9 490 aa20.52■□□□□ 0.88
TRAPPC9-210ENST00000521667 FRMPD4Q14CM0 1322 aa20.51■□□□□ 0.87
TRAPPC9-210ENST00000521667 B4DLN1 442 aa20.51■□□□□ 0.87
TRAPPC9-210ENST00000521667 KIF2AO00139 706 aaPredicted RBP20.51■□□□□ 0.87
TRAPPC9-210ENST00000521667 IPO5O00410 1097 aaKnown RBP20.51■□□□□ 0.87
TRAPPC9-210ENST00000521667 SLITRK3O94933 977 aa20.51■□□□□ 0.87
TRAPPC9-210ENST00000521667 RPS6P62753 249 aaKnown RBP20.51■□□□□ 0.87
TRAPPC9-210ENST00000521667 CTTNQ14247 550 aaKnown RBP20.51■□□□□ 0.87
TRAPPC9-210ENST00000521667 PCNX4Q63HM2 1172 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms