RNA–Protein interactions for RNA: ENST00000519596.5

PABPC1-211, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-211ENST00000519596 DEF6Q9H4E7 631 aa3.56□□□□□ -1.84
PABPC1-211ENST00000519596 ZNF408Q9H9D4 720 aa3.56□□□□□ -1.84
PABPC1-211ENST00000519596 FTSJ1Q9UET6 329 aa3.56□□□□□ -1.84
PABPC1-211ENST00000519596 CROTQ9UKG9 612 aa3.56□□□□□ -1.84
PABPC1-211ENST00000519596 ZNF652Q9Y2D9 606 aa3.56□□□□□ -1.84
PABPC1-211ENST00000519596 PCDHB4Q9Y5E5 795 aa3.56□□□□□ -1.84
PABPC1-211ENST00000519596 X6R8D5 127 aa3.56□□□□□ -1.84
PABPC1-211ENST00000519596 ANKRD62A6NC57 917 aa3.55□□□□□ -1.84
PABPC1-211ENST00000519596 B2RBV5 119 aa3.55□□□□□ -1.84
PABPC1-211ENST00000519596 H7BY64 318 aa3.55□□□□□ -1.84
PABPC1-211ENST00000519596 AGRPO00253 132 aa3.55□□□□□ -1.84
PABPC1-211ENST00000519596 KRIT1O00522 736 aa3.55□□□□□ -1.84
PABPC1-211ENST00000519596 MARCH6O60337 910 aa3.55□□□□□ -1.84
PABPC1-211ENST00000519596 IL13P35225 146 aa3.55□□□□□ -1.84
PABPC1-211ENST00000519596 GNL2Q13823 731 aaKnown RBP3.55□□□□□ -1.84
PABPC1-211ENST00000519596 TNNI3KQ59H18 835 aa3.55□□□□□ -1.84
PABPC1-211ENST00000519596 GORABQ5T7V8 394 aa3.55□□□□□ -1.84
PABPC1-211ENST00000519596 STEAP3Q658P3 488 aa3.55□□□□□ -1.84
PABPC1-211ENST00000519596 C6orf15Q6UXA7 325 aaPredicted RBP3.55□□□□□ -1.84
PABPC1-211ENST00000519596 LIMS2Q7Z4I7 341 aa3.55□□□□□ -1.84
PABPC1-211ENST00000519596 SPRED1Q7Z699 444 aa3.55□□□□□ -1.84
PABPC1-211ENST00000519596 CIR1Q86X95 450 aaPredicted RBP3.55□□□□□ -1.84
PABPC1-211ENST00000519596 TRIM48Q8IWZ4 208 aa3.55□□□□□ -1.84
PABPC1-211ENST00000519596 PPIL6Q8IXY8 311 aa3.55□□□□□ -1.84
PABPC1-211ENST00000519596 SLC43A3Q8NBI5 491 aa3.55□□□□□ -1.84
PABPC1-211ENST00000519596 NPLOC4Q8TAT6 608 aa3.55□□□□□ -1.84
PABPC1-211ENST00000519596 SH3RF3Q8TEJ3 882 aaPredicted RBP3.55□□□□□ -1.84
PABPC1-211ENST00000519596 BTN2A2Q8WVV5 523 aa3.55□□□□□ -1.84
PABPC1-211ENST00000519596 SREK1Q8WXA9 508 aaKnown RBP3.55□□□□□ -1.84
PABPC1-211ENST00000519596 MRGPRX3Q96LB0 322 aa3.55□□□□□ -1.84
PABPC1-211ENST00000519596 TMEM209Q96SK2 561 aa3.55□□□□□ -1.84
PABPC1-211ENST00000519596 GMLQ99445 158 aa3.55□□□□□ -1.84
PABPC1-211ENST00000519596 DNAJC2Q99543 621 aaKnown RBP3.55□□□□□ -1.84
PABPC1-211ENST00000519596 SYT3Q9BQG1 590 aa3.55□□□□□ -1.84
PABPC1-211ENST00000519596 BARX1Q9HBU1 254 aaPredicted RBP3.55□□□□□ -1.84
PABPC1-211ENST00000519596 ACTR10Q9NZ32 417 aa3.55□□□□□ -1.84
PABPC1-211ENST00000519596 DTLQ9NZJ0 730 aa3.55□□□□□ -1.84
PABPC1-211ENST00000519596 ST6GALNAC2Q9UJ37 374 aa3.55□□□□□ -1.84
PABPC1-211ENST00000519596 PCDHA2Q9Y5H9 948 aa3.55□□□□□ -1.84
PABPC1-211ENST00000519596 CLSPNQ9HAW4 1339 aa3.54□□□□□ -1.84
PABPC1-211ENST00000519596 TPD52L2O43399 206 aaKnown RBP3.54□□□□□ -1.84
PABPC1-211ENST00000519596 DDAH1O94760 285 aa3.54□□□□□ -1.84
PABPC1-211ENST00000519596 LTBRP36941 435 aa3.54□□□□□ -1.84
PABPC1-211ENST00000519596 PPP2CBP62714 309 aa3.54□□□□□ -1.84
PABPC1-211ENST00000519596 PPP2CAP67775 309 aa3.54□□□□□ -1.84
PABPC1-211ENST00000519596 CR1LQ2VPA4 569 aa3.54□□□□□ -1.84
PABPC1-211ENST00000519596 PRR31Q5SQ13 230 aa3.54□□□□□ -1.84
PABPC1-211ENST00000519596 ACBD5Q5T8D3 534 aaPredicted RBP3.54□□□□□ -1.84
PABPC1-211ENST00000519596 LARP1BQ659C4 914 aaKnown RBP3.54□□□□□ -1.84
PABPC1-211ENST00000519596 CRIP3Q6Q6R5 217 aa3.54□□□□□ -1.84
PABPC1-211ENST00000519596 CELF2-AS1Q8N7Q2 184 aa3.54□□□□□ -1.84
PABPC1-211ENST00000519596 GPATCH11Q8N954 259 aa3.54□□□□□ -1.84
PABPC1-211ENST00000519596 ZSWIM3Q96MP5 696 aa3.54□□□□□ -1.84
PABPC1-211ENST00000519596 C8orf37Q96NL8 207 aa3.54□□□□□ -1.84
PABPC1-211ENST00000519596 HIRIP3Q9BW71 556 aaPredicted RBP3.54□□□□□ -1.84
PABPC1-211ENST00000519596 EPB41L1Q9H4G0 881 aa3.54□□□□□ -1.84
PABPC1-211ENST00000519596 CLDND1Q9NY35 253 aa3.54□□□□□ -1.84
PABPC1-211ENST00000519596 PRKAG3Q9UGI9 489 aa3.54□□□□□ -1.84
PABPC1-211ENST00000519596 ZDHHC9Q9Y397 364 aa3.54□□□□□ -1.84
PABPC1-211ENST00000519596 NUB1Q9Y5A7 615 aa3.54□□□□□ -1.84
PABPC1-211ENST00000519596 B4GALT3O60512 393 aa3.53□□□□□ -1.84
PABPC1-211ENST00000519596 SCG5P05408 212 aa3.53□□□□□ -1.84
PABPC1-211ENST00000519596 ITGAVP06756 1048 aa3.53□□□□□ -1.84
PABPC1-211ENST00000519596 CENPBP07199 599 aaPredicted RBP3.53□□□□□ -1.84
PABPC1-211ENST00000519596 ZNF28P17035 718 aa3.53□□□□□ -1.84
PABPC1-211ENST00000519596 ADAM9Q13443 819 aa3.53□□□□□ -1.84
PABPC1-211ENST00000519596 FXNQ16595 210 aa3.53□□□□□ -1.84
PABPC1-211ENST00000519596 HS1BP3Q53T59 392 aa3.53□□□□□ -1.84
PABPC1-211ENST00000519596 NAALADL2Q58DX5 795 aa3.53□□□□□ -1.84
PABPC1-211ENST00000519596 MRM1Q6IN84 353 aaKnown RBP3.53□□□□□ -1.84
PABPC1-211ENST00000519596 TRMT10BQ6PF06 316 aaKnown RBP3.53□□□□□ -1.84
PABPC1-211ENST00000519596 TEPPQ6URK8 271 aa3.53□□□□□ -1.84
PABPC1-211ENST00000519596 FAM178BQ8IXR5 827 aa3.53□□□□□ -1.84
PABPC1-211ENST00000519596 KBTBD2Q8IY47 623 aa3.53□□□□□ -1.84
PABPC1-211ENST00000519596 Q8N1Y9 231 aa3.53□□□□□ -1.84
PABPC1-211ENST00000519596 KLHL36Q8N4N3 616 aa3.53□□□□□ -1.84
PABPC1-211ENST00000519596 PHOSPHO1Q8TCT1 267 aa3.53□□□□□ -1.84
PABPC1-211ENST00000519596 HNRNPLLQ8WVV9 542 aaKnown RBP3.53□□□□□ -1.84
PABPC1-211ENST00000519596 KLC2Q9H0B6 622 aa3.53□□□□□ -1.84
PABPC1-211ENST00000519596 PCED1AQ9H1Q7 454 aa3.53□□□□□ -1.84
PABPC1-211ENST00000519596 SEMA4AQ9H3S1 761 aa3.53□□□□□ -1.84
PABPC1-211ENST00000519596 SMOC1Q9H4F8 434 aa3.53□□□□□ -1.84
PABPC1-211ENST00000519596 ST7Q9NRC1 585 aa3.53□□□□□ -1.84
PABPC1-211ENST00000519596 MYOTQ9UBF9 498 aa3.53□□□□□ -1.84
PABPC1-211ENST00000519596 TSC22D4Q9Y3Q8 395 aa3.53□□□□□ -1.84
PABPC1-211ENST00000519596 R3HCC1Q9Y3T6 440 aaKnown RBP3.53□□□□□ -1.84
PABPC1-211ENST00000519596 TCAF1Q9Y4C2 921 aa3.53□□□□□ -1.84
PABPC1-211ENST00000519596 TCRBV5S2A0A599 114 aa3.52□□□□□ -1.85
PABPC1-211ENST00000519596 TBX1O43435 398 aa3.52□□□□□ -1.85
PABPC1-211ENST00000519596 KLF4O43474 513 aa3.52□□□□□ -1.85
PABPC1-211ENST00000519596 SUSD5O60279 629 aa3.52□□□□□ -1.85
PABPC1-211ENST00000519596 B4GALT4O60513 344 aa3.52□□□□□ -1.85
PABPC1-211ENST00000519596 FZD7O75084 574 aa3.52□□□□□ -1.85
PABPC1-211ENST00000519596 FBXO21O94952 628 aa3.52□□□□□ -1.85
PABPC1-211ENST00000519596 GJB6O95452 261 aa3.52□□□□□ -1.85
PABPC1-211ENST00000519596 CYP4F3Q08477 520 aa3.52□□□□□ -1.85
PABPC1-211ENST00000519596 EMC4Q5J8M3 183 aa3.52□□□□□ -1.85
PABPC1-211ENST00000519596 SLFN13Q68D06 897 aa3.52□□□□□ -1.85
PABPC1-211ENST00000519596 SPTY2D1Q68D10 685 aaPredicted RBP3.52□□□□□ -1.85
PABPC1-211ENST00000519596 VASNQ6EMK4 673 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms