RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 ZNF276Q8N554 614 aa1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 PDPRQ8NCN5 879 aa1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 ARRDC4Q8NCT1 418 aa1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 PLEKHO2Q8TD55 490 aa1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 ZNF384Q8TF68 577 aa1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 CFHR4Q92496 578 aa1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 LENG9Q96B70 501 aa1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 SETDB2Q96T68 719 aa1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 KATNBL1Q9H079 304 aa1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 TLR6Q9Y2C9 796 aa1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 NR2E1Q9Y466 385 aa1.13□□□□□ -2.23
RNU6-557P-201ENST00000516842 LRRC3CA6NJW4 275 aa1.12□□□□□ -2.23
RNU6-557P-201ENST00000516842 SHOXO15266 292 aa1.12□□□□□ -2.23
RNU6-557P-201ENST00000516842 TP73O15350 636 aa1.12□□□□□ -2.23
RNU6-557P-201ENST00000516842 NDUFB5O43674 189 aa1.12□□□□□ -2.23
RNU6-557P-201ENST00000516842 LRG1P02750 347 aa1.12□□□□□ -2.23
RNU6-557P-201ENST00000516842 RAG1P15918 1043 aa1.12□□□□□ -2.23
RNU6-557P-201ENST00000516842 SSFA2P28290 1259 aa1.12□□□□□ -2.23
RNU6-557P-201ENST00000516842 RPS19P39019 145 aaKnown RBP1.12□□□□□ -2.23
RNU6-557P-201ENST00000516842 GLRBP48167 497 aa1.12□□□□□ -2.23
RNU6-557P-201ENST00000516842 FOXG1P55316 489 aaPredicted RBP1.12□□□□□ -2.23
RNU6-557P-201ENST00000516842 RPS26P62854 115 aaKnown RBP1.12□□□□□ -2.23
RNU6-557P-201ENST00000516842 ZNF568Q3ZCX4 644 aa1.12□□□□□ -2.23
RNU6-557P-201ENST00000516842 LY6G5CQ5SRR4 150 aa1.12□□□□□ -2.23
RNU6-557P-201ENST00000516842 KCNV1Q6PIU1 500 aa1.12□□□□□ -2.23
RNU6-557P-201ENST00000516842 DCP2Q8IU60 420 aaKnown RBP1.12□□□□□ -2.23
RNU6-557P-201ENST00000516842 TEX2Q8IWB9 1127 aa1.12□□□□□ -2.23
RNU6-557P-201ENST00000516842 ZSCAN29Q8IWY8 852 aaPredicted RBP1.12□□□□□ -2.23
RNU6-557P-201ENST00000516842 TMEM192Q8IY95 271 aa1.12□□□□□ -2.23
RNU6-557P-201ENST00000516842 RGS22Q8NE09 1264 aa1.12□□□□□ -2.23
RNU6-557P-201ENST00000516842 ANKRD24Q8TF21 1146 aa1.12□□□□□ -2.23
RNU6-557P-201ENST00000516842 DDB2Q92466 427 aa1.12□□□□□ -2.23
RNU6-557P-201ENST00000516842 MCMBPQ9BTE3 642 aa1.12□□□□□ -2.23
RNU6-557P-201ENST00000516842 AP5M1Q9H0R1 490 aa1.12□□□□□ -2.23
RNU6-557P-201ENST00000516842 CYP4F11Q9HBI6 524 aa1.12□□□□□ -2.23
RNU6-557P-201ENST00000516842 TTF2Q9UNY4 1162 aaKnown RBP1.12□□□□□ -2.23
RNU6-557P-201ENST00000516842 HS3ST4Q9Y661 456 aa1.12□□□□□ -2.23
RNU6-557P-201ENST00000516842 PNMA6FA0A0J9YX94 578 aa1.11□□□□□ -2.23
RNU6-557P-201ENST00000516842 CLEC3AO75596 197 aa1.11□□□□□ -2.23
RNU6-557P-201ENST00000516842 IGLV2-14P01704 120 aa1.11□□□□□ -2.23
RNU6-557P-201ENST00000516842 SLC6A11P48066 632 aa1.11□□□□□ -2.23
RNU6-557P-201ENST00000516842 LIG3P49916 1009 aa1.11□□□□□ -2.23
RNU6-557P-201ENST00000516842 ELLP55199 621 aaPredicted RBP1.11□□□□□ -2.23
RNU6-557P-201ENST00000516842 CNGB1Q14028 1251 aaPredicted RBP1.11□□□□□ -2.23
RNU6-557P-201ENST00000516842 SMAD2Q15796 467 aaKnown RBP1.11□□□□□ -2.23
RNU6-557P-201ENST00000516842 TECPR1Q7Z6L1 1165 aa1.11□□□□□ -2.23
RNU6-557P-201ENST00000516842 RBMXL3Q8N7X1 1067 aaKnown RBP1.11□□□□□ -2.23
RNU6-557P-201ENST00000516842 STPG3Q8N7X2 389 aa1.11□□□□□ -2.23
RNU6-557P-201ENST00000516842 DPF3Q92784 378 aa1.11□□□□□ -2.23
RNU6-557P-201ENST00000516842 NELL1Q92832 810 aa1.11□□□□□ -2.23
RNU6-557P-201ENST00000516842 TOE1Q96GM8 510 aaKnown RBP1.11□□□□□ -2.23
RNU6-557P-201ENST00000516842 ZNF48Q96MX3 618 aaPredicted RBP1.11□□□□□ -2.23
RNU6-557P-201ENST00000516842 FCRL4Q96PJ5 515 aa1.11□□□□□ -2.23
RNU6-557P-201ENST00000516842 TMEM209Q96SK2 561 aa1.11□□□□□ -2.23
RNU6-557P-201ENST00000516842 AGO3Q9H9G7 860 aaKnown RBP1.11□□□□□ -2.23
RNU6-557P-201ENST00000516842 BTG4Q9NY30 223 aa1.11□□□□□ -2.23
RNU6-557P-201ENST00000516842 WWOXQ9NZC7 414 aa1.11□□□□□ -2.23
RNU6-557P-201ENST00000516842 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP1.11□□□□□ -2.23
RNU6-557P-201ENST00000516842 MARCH2Q9P0N8 246 aa1.11□□□□□ -2.23
RNU6-557P-201ENST00000516842 ZNF112Q9UJU3 913 aa1.11□□□□□ -2.23
RNU6-557P-201ENST00000516842 SH3BP1Q9Y3L3 701 aa1.11□□□□□ -2.23
RNU6-557P-201ENST00000516842 PRR36Q9H6K5 1346 aa1.11□□□□□ -2.23
RNU6-557P-201ENST00000516842 NOTCH4Q99466 2003 aa1.1□□□□□ -2.23
RNU6-557P-201ENST00000516842 C7orf72A4D263 438 aa1.1□□□□□ -2.23
RNU6-557P-201ENST00000516842 F6X3S4 739 aa1.1□□□□□ -2.23
RNU6-557P-201ENST00000516842 H3BRB1 525 aa1.1□□□□□ -2.23
RNU6-557P-201ENST00000516842 LPXNO60711 386 aa1.1□□□□□ -2.23
RNU6-557P-201ENST00000516842 ICMTO60725 284 aa1.1□□□□□ -2.23
RNU6-557P-201ENST00000516842 ITGB1P05556 798 aa1.1□□□□□ -2.23
RNU6-557P-201ENST00000516842 USP17L7P0C7H9 530 aa1.1□□□□□ -2.23
RNU6-557P-201ENST00000516842 FOXI1Q12951 378 aa1.1□□□□□ -2.23
RNU6-557P-201ENST00000516842 CCDC85BQ15834 202 aaPredicted RBP1.1□□□□□ -2.23
RNU6-557P-201ENST00000516842 MBLAC2Q68D91 279 aa1.1□□□□□ -2.23
RNU6-557P-201ENST00000516842 PHLDB3Q6NSJ2 640 aa1.1□□□□□ -2.23
RNU6-557P-201ENST00000516842 BMP8AQ7Z5Y6 402 aa1.1□□□□□ -2.23
RNU6-557P-201ENST00000516842 SYNE4Q8N205 404 aa1.1□□□□□ -2.23
RNU6-557P-201ENST00000516842 DTX3Q8N9I9 347 aa1.1□□□□□ -2.23
RNU6-557P-201ENST00000516842 THAP3Q8WTV1 239 aaPredicted RBP1.1□□□□□ -2.23
RNU6-557P-201ENST00000516842 PGBD4Q96DM1 585 aa1.1□□□□□ -2.23
RNU6-557P-201ENST00000516842 CARD11Q9BXL7 1154 aa1.1□□□□□ -2.23
RNU6-557P-201ENST00000516842 KIAA1683Q9H0B3 1180 aa1.1□□□□□ -2.23
RNU6-557P-201ENST00000516842 TUT1Q9H6E5 874 aaKnown RBP1.1□□□□□ -2.23
RNU6-557P-201ENST00000516842 ALG13Q9NP73 1137 aaKnown RBP1.1□□□□□ -2.23
RNU6-557P-201ENST00000516842 NGRNQ9NPE2 291 aaKnown RBP1.1□□□□□ -2.23
RNU6-557P-201ENST00000516842 DTLQ9NZJ0 730 aa1.1□□□□□ -2.23
RNU6-557P-201ENST00000516842 ZFP69BQ9UJL9 534 aa1.1□□□□□ -2.23
RNU6-557P-201ENST00000516842 FAM221AA4D161 298 aa1.09□□□□□ -2.23
RNU6-557P-201ENST00000516842 FAM86C2PA6NEL3 165 aa1.09□□□□□ -2.23
RNU6-557P-201ENST00000516842 C9IYK1 514 aa1.09□□□□□ -2.23
RNU6-557P-201ENST00000516842 STXBP3O00186 592 aa1.09□□□□□ -2.23
RNU6-557P-201ENST00000516842 TRAF5O00463 557 aa1.09□□□□□ -2.23
RNU6-557P-201ENST00000516842 CYP27B1O15528 508 aa1.09□□□□□ -2.23
RNU6-557P-201ENST00000516842 C1QL1O75973 258 aa1.09□□□□□ -2.23
RNU6-557P-201ENST00000516842 F13A1P00488 732 aa1.09□□□□□ -2.23
RNU6-557P-201ENST00000516842 FPR2P25090 351 aa1.09□□□□□ -2.23
RNU6-557P-201ENST00000516842 CXCR5P32302 372 aa1.09□□□□□ -2.23
RNU6-557P-201ENST00000516842 ZEB1P37275 1124 aaPredicted RBP1.09□□□□□ -2.23
RNU6-557P-201ENST00000516842 NOP2P46087 812 aaKnown RBP1.09□□□□□ -2.23
RNU6-557P-201ENST00000516842 ZNF445P59923 1031 aa1.09□□□□□ -2.23
RNU6-557P-201ENST00000516842 KRTAP10-1P60331 282 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms