RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 ZNF654Q8IZM8 581 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 RAET1EQ8TD07 263 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 COG4Q9H9E3 785 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 DIP2AQ14689 1571 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 NEURL1BA8MQ27 555 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 EIF3CLB5ME19 914 aaKnown RBP6.26□□□□□ -1.41
USP38-203ENST00000511739 GOLGA8SH3BPF8 625 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 ATICP31939 592 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 ACCSLQ4AC99 568 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 RC3H1Q5TC82 1133 aaKnown RBP6.26□□□□□ -1.41
USP38-203ENST00000511739 ARHGEF18Q6ZSZ5 1173 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 TMC4Q7Z404 712 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 SCN4BQ8IWT1 228 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 OTUD7AQ8TE49 926 aaPredicted RBP6.26□□□□□ -1.41
USP38-203ENST00000511739 EIF3CQ99613 913 aaKnown RBP6.26□□□□□ -1.41
USP38-203ENST00000511739 FIS1Q9Y3D6 152 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 A0A1B0GUA9 196 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 KRIT1O00522 736 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 KCNK3O14649 394 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 CPP00450 1065 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 SERPINB2P05120 415 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 HSPA6P17066 643 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 FANCCQ00597 558 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 MTERF2Q49AM1 385 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 ZBTB41Q5SVQ8 909 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 OR6B2Q6IFH4 312 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 MORC4Q8TE76 937 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 GJA10Q969M2 543 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 ZSCAN10Q96SZ4 725 aaPredicted RBP6.26□□□□□ -1.41
USP38-203ENST00000511739 YIPF2Q9BWQ6 316 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 HOMER3Q9NSC5 361 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 KLHL14Q9P2G3 628 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 SLC4A7Q9Y6M7 1214 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 XDHP47989 1333 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 SEMA3EO15041 775 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 OR52Z1P0C646 297 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 ABCD1P33897 745 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 PRKCQQ04759 706 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 RWDD4Q6NW29 188 aaKnown RBP6.26□□□□□ -1.41
USP38-203ENST00000511739 CFAP61Q8NHU2 1237 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 PDCD6IPQ8WUM4 868 aaKnown RBP6.26□□□□□ -1.41
USP38-203ENST00000511739 SUCLG2Q96I99 432 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 ZNF496Q96IT1 587 aaPredicted RBP6.26□□□□□ -1.41
USP38-203ENST00000511739 SLF1Q9BQI6 1058 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 TEX12Q9BXU0 123 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 RPF1Q9H9Y2 349 aaKnown RBP6.26□□□□□ -1.41
USP38-203ENST00000511739 NFE2L3Q9Y4A8 694 aa6.26□□□□□ -1.41
USP38-203ENST00000511739 ARHGEF28Q8N1W1 1705 aaKnown RBP6.25□□□□□ -1.41
USP38-203ENST00000511739 TMCC1O94876 653 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 SERPINB6P35237 376 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 TSPY1Q01534 308 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 GPR108Q9NPR9 543 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 DDX41Q9UJV9 622 aaKnown RBP6.25□□□□□ -1.41
USP38-203ENST00000511739 ZNF804BA4D1E1 1349 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 OVOS2A0A0J9YW53 1432 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 OVOS2Q6IE36 1432 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 CPA1P15085 419 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 MARK3P27448 753 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 MYL7Q01449 175 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 LMNB2Q03252 620 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 YWHAHQ04917 246 aaPredicted RBP6.25□□□□□ -1.41
USP38-203ENST00000511739 ADAM9Q13443 819 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 PDXDC2PQ6P474 469 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 FRA10AC1Q70Z53 315 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 RTKN2Q8IZC4 609 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 PPWD1Q96BP3 646 aaKnown RBP6.25□□□□□ -1.41
USP38-203ENST00000511739 CCDC138Q96M89 665 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 PLEKHA4Q9H4M7 779 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 COPRSQ9NQ92 184 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 SNX14Q9Y5W7 946 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 MCF2LO15068 1137 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 ZNF202O95125 648 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 BRD1O95696 1058 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 TBC1D10BQ4KMP7 808 aaPredicted RBP6.25□□□□□ -1.41
USP38-203ENST00000511739 GPATCH4Q5T3I0 446 aaKnown RBP6.25□□□□□ -1.41
USP38-203ENST00000511739 TTC19Q6DKK2 380 aaPredicted RBP6.25□□□□□ -1.41
USP38-203ENST00000511739 NLRP4Q96MN2 994 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 EPS15L1Q9UBC2 864 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 STK38LQ9Y2H1 464 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 UBN2Q6ZU65 1347 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 EFCAB14O75071 495 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 GDF11O95390 407 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 APOEP02649 317 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 ZNF445P59923 1031 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 RAD51Q06609 339 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 VEPH1Q14D04 833 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 CCDC157Q569K6 752 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 SLC10A5Q5PT55 438 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 TWF2Q6IBS0 349 aaKnown RBP6.25□□□□□ -1.41
USP38-203ENST00000511739 SPOPLQ6IQ16 392 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 GALNT17Q6IS24 598 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 TRIM67Q6ZTA4 783 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 TTLL6Q8N841 843 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 WDR11Q9BZH6 1224 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 PIM2Q9P1W9 311 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 CLCA2Q9UQC9 943 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 MAP3K15Q6ZN16 1313 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 TMEM94Q12767 1356 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 OPHN1O60890 802 aa6.25□□□□□ -1.41
USP38-203ENST00000511739 SRGAP2CP0DJJ0 459 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms