RNA–Protein interactions for RNA: ENST00000509535.5

RACK1-222, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-222	ENST00000509535	IFIH1	Q9BYX4	1025 aa	Known RBP	10.08	□□□□□ -0.8
RACK1-222	ENST00000509535	ZNF287	Q9HBT7	754 aa		10.08	□□□□□ -0.8
RACK1-222	ENST00000509535	HELLS	Q9NRZ9	838 aa		10.08	□□□□□ -0.8
RACK1-222	ENST00000509535	CLEC1B	Q9P126	229 aa		10.08	□□□□□ -0.8
RACK1-222	ENST00000509535	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	RSPH10B2	B2RC85	870 aa		10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	HIP1	O00291	1037 aa		10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	GH1	P01241	217 aa		10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	RSPH10B	P0C881	870 aa		10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	TSPY3	P0CV98	308 aa		10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	TSPY8	P0CW00	308 aa		10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	ICAM3	P32942	547 aa		10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	BMPR1A	P36894	532 aa		10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	THPO	P40225	353 aa		10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	ARHGAP1	Q07960	439 aa		10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	COASY	Q13057	564 aa		10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	DGKD	Q16760	1214 aa		10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	PTPN21	Q16825	1174 aa		10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	LY6K	Q17RY6	165 aa		10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	KIAA0753	Q2KHM9	967 aa		10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	CCDC62	Q6P9F0	684 aa		10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	RNF207	Q6ZRF8	634 aa		10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	NEDD1	Q8NHV4	660 aa		10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	SEPT8	Q92599	483 aa		10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	RILPL2	Q969X0	211 aa		10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	IL17RA	Q96F46	866 aa		10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	RIPOR3	Q96MK2	946 aa		10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	PHF7	Q9BWX1	381 aa	Predicted RBP	10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	USP15	Q9Y4E8	981 aa	Predicted RBP	10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	OTOGL	Q3ZCN5	2332 aa		10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	ATRX	P46100	2492 aa		10.07	□□□□□ -0.8
RACK1-222	ENST00000509535	GPAA1	O43292	621 aa		10.06	□□□□□ -0.8
RACK1-222	ENST00000509535	MMP1	P03956	469 aa		10.06	□□□□□ -0.8
RACK1-222	ENST00000509535	LINC00271	P0C7V0	271 aa		10.06	□□□□□ -0.8
RACK1-222	ENST00000509535	ZNF286B	P0CG31	522 aa		10.06	□□□□□ -0.8
RACK1-222	ENST00000509535	CHML	P26374	656 aa		10.06	□□□□□ -0.8
RACK1-222	ENST00000509535	HIC1	Q14526	733 aa		10.06	□□□□□ -0.8
RACK1-222	ENST00000509535	MFSD10	Q14728	455 aa		10.06	□□□□□ -0.8
RACK1-222	ENST00000509535	GIMAP6	Q6P9H5	292 aa		10.06	□□□□□ -0.8
RACK1-222	ENST00000509535	DHX37	Q8IY37	1157 aa	Known RBP	10.06	□□□□□ -0.8
RACK1-222	ENST00000509535	DNER	Q8NFT8	737 aa		10.06	□□□□□ -0.8
RACK1-222	ENST00000509535	PPP2R3C	Q969Q6	453 aa		10.06	□□□□□ -0.8
RACK1-222	ENST00000509535	SEC62	Q99442	399 aa	Known RBP	10.06	□□□□□ -0.8
RACK1-222	ENST00000509535	KATNAL1	Q9BW62	490 aa		10.06	□□□□□ -0.8
RACK1-222	ENST00000509535	RANBP17	Q9H2T7	1088 aa	Known RBP	10.06	□□□□□ -0.8
RACK1-222	ENST00000509535	RWDD3	Q9Y3V2	267 aa		10.06	□□□□□ -0.8
RACK1-222	ENST00000509535	USP24	Q9UPU5	2620 aa		10.06	□□□□□ -0.8
RACK1-222	ENST00000509535	FANCM	Q8IYD8	2048 aa		10.06	□□□□□ -0.8
RACK1-222	ENST00000509535		A0A0D9SFI3	127 aa		10.05	□□□□□ -0.8
RACK1-222	ENST00000509535		B4DLN1	442 aa		10.05	□□□□□ -0.8
RACK1-222	ENST00000509535	FOXP2	O15409	715 aa		10.05	□□□□□ -0.8
RACK1-222	ENST00000509535	F2	P00734	622 aa		10.05	□□□□□ -0.8
RACK1-222	ENST00000509535	MRPL12	P52815	198 aa	Known RBP	10.05	□□□□□ -0.8
RACK1-222	ENST00000509535	RPS6	P62753	249 aa	Known RBP	10.05	□□□□□ -0.8
RACK1-222	ENST00000509535	TFAP4	Q01664	338 aa		10.05	□□□□□ -0.8
RACK1-222	ENST00000509535	NMI	Q13287	307 aa	Predicted RBP	10.05	□□□□□ -0.8
RACK1-222	ENST00000509535	CAMK1	Q14012	370 aa		10.05	□□□□□ -0.8
RACK1-222	ENST00000509535	MCMDC2	Q4G0Z9	681 aa		10.05	□□□□□ -0.8
RACK1-222	ENST00000509535	MCTP2	Q6DN12	878 aa		10.05	□□□□□ -0.8
RACK1-222	ENST00000509535	SEPT14	Q6ZU15	432 aa		10.05	□□□□□ -0.8
RACK1-222	ENST00000509535	DGLUCY	Q7Z3D6	616 aa		10.05	□□□□□ -0.8
RACK1-222	ENST00000509535	ADGRD2	Q7Z7M1	963 aa		10.05	□□□□□ -0.8
RACK1-222	ENST00000509535	ZBTB33	Q86T24	672 aa		10.05	□□□□□ -0.8
RACK1-222	ENST00000509535	SERINC5	Q86VE9	423 aa		10.05	□□□□□ -0.8
RACK1-222	ENST00000509535	EFHB	Q8N7U6	833 aa		10.05	□□□□□ -0.8
RACK1-222	ENST00000509535	TMEM105	Q8N8V8	129 aa		10.05	□□□□□ -0.8
RACK1-222	ENST00000509535	CLEC4D	Q8WXI8	215 aa		10.05	□□□□□ -0.8
RACK1-222	ENST00000509535	RMDN1	Q96DB5	314 aa		10.05	□□□□□ -0.8
RACK1-222	ENST00000509535	FAM227B	Q96M60	508 aa		10.05	□□□□□ -0.8
RACK1-222	ENST00000509535	OSBPL7	Q9BZF2	842 aa		10.05	□□□□□ -0.8
RACK1-222	ENST00000509535	BARX2	Q9UMQ3	279 aa	Predicted RBP	10.05	□□□□□ -0.8
RACK1-222	ENST00000509535	STX8	Q9UNK0	236 aa		10.05	□□□□□ -0.8
RACK1-222	ENST00000509535	MTMR7	Q9Y216	660 aa		10.05	□□□□□ -0.8
RACK1-222	ENST00000509535	ADGRA3	Q8IWK6	1321 aa		10.05	□□□□□ -0.8
RACK1-222	ENST00000509535	HAS3	O00219	553 aa		10.04	□□□□□ -0.8
RACK1-222	ENST00000509535	GLP2R	O95838	553 aa		10.04	□□□□□ -0.8
RACK1-222	ENST00000509535	SLC16A2	P36021	539 aa		10.04	□□□□□ -0.8
RACK1-222	ENST00000509535	NRIP1	P48552	1158 aa		10.04	□□□□□ -0.8
RACK1-222	ENST00000509535	TDO2	P48775	406 aa		10.04	□□□□□ -0.8
RACK1-222	ENST00000509535	CCDC96	Q2M329	555 aa		10.04	□□□□□ -0.8
RACK1-222	ENST00000509535	CLP1	Q92989	425 aa	Known RBP	10.04	□□□□□ -0.8
RACK1-222	ENST00000509535	CNTNAP3B	Q96NU0	1288 aa		10.04	□□□□□ -0.8
RACK1-222	ENST00000509535	CNTNAP3	Q9BZ76	1288 aa		10.04	□□□□□ -0.8
RACK1-222	ENST00000509535	PLAGL2	Q9UPG8	496 aa		10.04	□□□□□ -0.8
RACK1-222	ENST00000509535	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	10.04	□□□□□ -0.8
RACK1-222	ENST00000509535	PATL2	C9JE40	543 aa	Known RBP	10.03	□□□□□ -0.8
RACK1-222	ENST00000509535	SGSM2	O43147	1006 aa		10.03	□□□□□ -0.8
RACK1-222	ENST00000509535	APP	P05067	770 aa		10.03	□□□□□ -0.8
RACK1-222	ENST00000509535	CTSH	P09668	335 aa		10.03	□□□□□ -0.8
RACK1-222	ENST00000509535	ATF7	P17544	494 aa	Predicted RBP	10.03	□□□□□ -0.8
RACK1-222	ENST00000509535	GNAT2	P19087	354 aa		10.03	□□□□□ -0.8
RACK1-222	ENST00000509535	DNAJB1	P25685	340 aa		10.03	□□□□□ -0.8
RACK1-222	ENST00000509535	ALX1	Q15699	326 aa		10.03	□□□□□ -0.8
RACK1-222	ENST00000509535	SYDE2	Q5VT97	1194 aa		10.03	□□□□□ -0.8
RACK1-222	ENST00000509535	TTBK2	Q6IQ55	1244 aa		10.03	□□□□□ -0.8
RACK1-222	ENST00000509535	RBM23	Q86U06	439 aa	Known RBP	10.03	□□□□□ -0.8
RACK1-222	ENST00000509535	ZNF589	Q86UQ0	364 aa	Predicted RBP	10.03	□□□□□ -0.8
RACK1-222	ENST00000509535	IFNL3	Q8IZI9	196 aa		10.03	□□□□□ -0.8
RACK1-222	ENST00000509535	PLVAP	Q9BX97	442 aa		10.03	□□□□□ -0.8

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