RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 PCDHGC5Q9Y5F6 944 aa4.62□□□□□ -1.67
HMGN1P11-201ENST00000508668 LRRFIP2Q9Y608 721 aaKnown RBP4.62□□□□□ -1.67
HMGN1P11-201ENST00000508668 ZNF609O15014 1411 aa4.62□□□□□ -1.67
HMGN1P11-201ENST00000508668 DUOX1Q9NRD9 1551 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 TAF1P21675 1872 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 PRAMEF27A3QJZ7 478 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 DHX15O43143 795 aaKnown RBP4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 PDE8BO95263 885 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 BMP3P12645 472 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 KLRK1P26718 216 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 EIF4A3P38919 411 aaKnown RBP4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 ASPAP45381 313 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 CDK8P49336 464 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 PRMT2P55345 433 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 UBXN2AP68543 259 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 GSTO1P78417 241 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 LMNB2Q03252 620 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 PABPC4Q13310 644 aaKnown RBP eCLIP4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 INPP5AQ14642 412 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 WIPI1Q5MNZ9 446 aaPredicted RBP4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 NBPF12Q5TAG4 269 aaPredicted RBP4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 SCARA3Q6AZY7 606 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 LRFN4Q6PJG9 635 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 BNC2Q6ZN30 1099 aaPredicted RBP4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 C12orf40Q86WS4 652 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 ERO1BQ86YB8 467 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 GOLM1Q8NBJ4 401 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 SMCR8Q8TEV9 937 aaPredicted RBP4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 LPIN2Q92539 896 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 DPF3Q92784 378 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 PRMT6Q96LA8 375 aaPredicted RBP4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 MYRFLQ96LU7 910 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 FANCD2OSQ96PS1 177 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 PARK7Q99497 189 aaKnown RBP4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 SIL1Q9H173 461 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 BICC1Q9H694 974 aaKnown RBP4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 PIDD1Q9HB75 910 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 FAM105AQ9NUU6 356 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 CACNA2D2Q9NY47 1150 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 CRIM1Q9NZV1 1036 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 ABCF2Q9UG63 623 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 DENND2AQ9ULE3 1009 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 CASP8AP2Q9UKL3 1982 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 THSD7BQ9C0I4 1608 aa4.61□□□□□ -1.67
HMGN1P11-201ENST00000508668 MYH3P11055 1940 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 RNGTTO60942 597 aaKnown RBP4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 BPNT1O95861 308 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 F13A1P00488 732 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 LDHCP07864 332 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 GNAI3P08754 354 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 CT47B1P0C2W7 299 aaPredicted RBP4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 TCF3P15923 654 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 IL15P40933 162 aaPredicted RBP4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 FOXO4P98177 505 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 G3BP1Q13283 466 aaKnown RBP eCLIP4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 CRHR2Q13324 411 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 TTLL4Q14679 1199 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 MVPQ14764 893 aaKnown RBP4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 ATP2B3Q16720 1220 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 ALDH1L2Q3SY69 923 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 ZC3H12AQ5D1E8 599 aaKnown RBP4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 PPM1JQ5JR12 505 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 DIEXFQ68CQ4 756 aaKnown RBP4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 CDPF1Q6NVV7 123 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 ATF7IPQ6VMQ6 1270 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 FASTKD5Q7L8L6 764 aaKnown RBP4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 HDXQ7Z353 690 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 FAM83AQ86UY5 434 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 METTL16Q86W50 562 aaKnown RBP4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 NT5DC4Q86YG4 428 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 FAM20CQ8IXL6 584 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 FTSJ3Q8IY81 847 aaKnown RBP4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 TDRD7Q8NHU6 1098 aaKnown RBP4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 CD99L2Q8TCZ2 262 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 FBLIM1Q8WUP2 373 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 FRAT1Q92837 279 aaPredicted RBP4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 PLPPR2Q96GM1 343 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 SUCLG2Q96I99 432 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 CLMNQ96JQ2 1002 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 NEUROD6Q96NK8 337 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 HTATIP2Q9BUP3 242 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 YIPF2Q9BWQ6 316 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 TMEM39BQ9GZU3 492 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 ATXN3LQ9H3M9 355 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 USP40Q9NVE5 1235 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 HIF3AQ9Y2N7 669 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 DAGLAQ9Y4D2 1042 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 FAM205AQ6ZU69 1335 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 KIF16BQ96L93 1317 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 SYNGAP1Q96PV0 1343 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 SPEF2Q9C093 1822 aa4.6□□□□□ -1.67
HMGN1P11-201ENST00000508668 SNAP23O00161 211 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 EYA2O00167 538 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 TLR3O15455 904 aaKnown RBP4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 USP2O75604 605 aaPredicted RBP4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 BAG3O95817 575 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 NBPF7P0C2Y1 421 aaPredicted RBP4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 MAP4P27816 1152 aaKnown RBP4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 ERVK-24P63145 666 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 RACK1P63244 317 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms