RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 BCCIPQ9P287 314 aaKnown RBP eCLIP3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 B4GALT6Q9UBX8 382 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 CGGBP1Q9UFW8 167 aaPredicted RBP3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 ZNF180Q9UJW8 692 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 ANKRD6Q9Y2G4 727 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 GIT1Q9Y2X7 761 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 ZNF451Q9Y4E5 1061 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 CCDC141Q6ZP82 1450 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 KIF1AQ12756 1690 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 CCNB3Q8WWL7 1395 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 KRBA1A5PL33 1030 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 FAM177BA6PVY3 158 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 PRKD3O94806 890 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 DLGAP3O95886 979 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 CKMP06732 381 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 PAX3P23760 479 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 CYP2C19P33261 490 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 ADCYAP1R1P41586 468 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 RECQLP46063 649 aaPredicted RBP3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 MAP2K3P46734 347 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 PHC1P78364 1004 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 KLF1Q13351 362 aaPredicted RBP3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 AUHQ13825 339 aaKnown RBP3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 RAPGEF1Q13905 1077 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 COL9A3Q14050 684 aaPredicted RBP3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 GALEQ14376 348 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 CFAP100Q494V2 611 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 EXOSC6Q5RKV6 272 aaKnown RBP3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 GTF2IRD2BQ6EKJ0 949 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 PSAPL1Q6NUJ1 521 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 ERAP2Q6P179 960 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 FAM117BQ6P1L5 589 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 ABHD17CQ6PCB6 329 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 B3GNT9Q6UX72 402 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 UBE2R2Q712K3 238 aaPredicted RBP3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 EPM2AIP1Q7L775 607 aaPredicted RBP3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 GTF2IRD2Q86UP8 949 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 CMTR2Q8IYT2 770 aaKnown RBP3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 CNTROBQ8N137 903 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 MICALL1Q8N3F8 863 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 MFSD2AQ8NA29 543 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 SMG8Q8ND04 991 aaKnown RBP3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 PI4K2BQ8TCG2 481 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 SLC7A3Q8WY07 619 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 PPM1EQ8WY54 764 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 SSH1Q8WYL5 1049 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 GTPBP3Q969Y2 492 aaKnown RBP3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 ACSBG1Q96GR2 724 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 COX4I2Q96KJ9 171 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 MAGEB10Q96LZ2 347 aaPredicted RBP3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 FBRSQ9HAH7 460 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 LUC7LQ9NQ29 371 aaKnown RBP3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 SAGE1Q9NXZ1 904 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 TERF2IPQ9NYB0 399 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 CCDC18Q5T9S5 1454 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 GCN1Q92616 2671 aaKnown RBP3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 KNDC1Q76NI1 1749 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 KIAA1551Q9HCM1 1747 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 NCOR2Q9Y618 2525 aa3.13□□□□□ -1.91
CKS1BP2-201ENST00000497342 ANKRD30BQ9BXX2 1392 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 FAM208BQ5VWN6 2430 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 CRB1P82279 1406 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 GCC2Q8IWJ2 1684 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 QRICH2Q9H0J4 1663 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 PTPRZ1P23471 2315 aaPredicted RBP3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 SPDYE3A6NKU9 549 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 DCDC2CA8MYV0 355 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 GPR25O00155 361 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 TRAF5O00463 557 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 NOP56O00567 594 aaKnown RBP3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 OPA1O60313 960 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 ADAM11O75078 769 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 RGS9O75916 674 aaPredicted RBP3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 LRIG2O94898 1065 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 TIAF1O95411 115 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 NEFMP07197 916 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 JMJD7P0C870 316 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 TSPY4P0CV99 314 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 TSPY10P0CW01 314 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 ITGA4P13612 1032 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 LIG1P18858 919 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 AKAP5P24588 427 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 TM4SF4P48230 202 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 SCNN1BP51168 640 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 SESN3P58005 492 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 ZNF445P59923 1031 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 GPR85P60893 370 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 ETF1P62495 437 aaKnown RBP3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 RBM10P98175 930 aaKnown RBP3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 OCRLQ01968 901 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 SAFB2Q14151 953 aaKnown RBP eCLIP3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 GAS6Q14393 721 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 BRD3Q15059 726 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 ZRSR2Q15696 482 aaKnown RBP3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 NKG7Q16617 165 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 NBPF9Q3BBW0 867 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 INO80DQ53TQ3 878 aaPredicted RBP3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 FAM83BQ5T0W9 1011 aa3.12□□□□□ -1.91
CKS1BP2-201ENST00000497342 DCAF15Q66K64 600 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms