RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 SH2D4AQ9H788 454 aa14.47□□□□□ -0.09
GARNL3-220ENST00000496711 ARGLU1Q9NWB6 273 aaPredicted RBP14.47□□□□□ -0.09
GARNL3-220ENST00000496711 OGFRQ9NZT2 677 aa14.47□□□□□ -0.09
GARNL3-220ENST00000496711 VAV3Q9UKW4 847 aa14.47□□□□□ -0.09
GARNL3-220ENST00000496711 PCDHA2Q9Y5H9 948 aa14.47□□□□□ -0.09
GARNL3-220ENST00000496711 NPHP3-ACAD11A0A0J9YXS1 232 aa14.46□□□□□ -0.09
GARNL3-220ENST00000496711 SPDYE4A6NLX3 237 aa14.46□□□□□ -0.09
GARNL3-220ENST00000496711 ABL1P00519 1130 aa14.46□□□□□ -0.09
GARNL3-220ENST00000496711 KCNA3P22001 575 aa14.46□□□□□ -0.09
GARNL3-220ENST00000496711 ZNF76P36508 570 aa14.46□□□□□ -0.09
GARNL3-220ENST00000496711 HERVK_113P62684 666 aa14.46□□□□□ -0.09
GARNL3-220ENST00000496711 KIF4BQ2VIQ3 1234 aa14.46□□□□□ -0.09
GARNL3-220ENST00000496711 RSRC2Q7L4I2 434 aaKnown RBP14.46□□□□□ -0.09
GARNL3-220ENST00000496711 FAM83AQ86UY5 434 aa14.46□□□□□ -0.09
GARNL3-220ENST00000496711 AGBL3Q8NEM8 1001 aa14.46□□□□□ -0.09
GARNL3-220ENST00000496711 GOLGA1Q92805 767 aa14.46□□□□□ -0.09
GARNL3-220ENST00000496711 CEP63Q96MT8 703 aa14.46□□□□□ -0.09
GARNL3-220ENST00000496711 FGFBP2Q9BYJ0 223 aa14.46□□□□□ -0.09
GARNL3-220ENST00000496711 VCPKMTQ9H867 229 aa14.46□□□□□ -0.09
GARNL3-220ENST00000496711 TBC1D7Q9P0N9 293 aa14.46□□□□□ -0.09
GARNL3-220ENST00000496711 CDC23Q9UJX2 597 aa14.46□□□□□ -0.09
GARNL3-220ENST00000496711 ZNRF3Q9ULT6 936 aa14.46□□□□□ -0.09
GARNL3-220ENST00000496711 COL4A3BPQ9Y5P4 624 aa14.46□□□□□ -0.09
GARNL3-220ENST00000496711 EIF3CLB5ME19 914 aaKnown RBP14.46□□□□□ -0.1
GARNL3-220ENST00000496711 IPO7O95373 1038 aaKnown RBP14.46□□□□□ -0.1
GARNL3-220ENST00000496711 SPATA31C1P0DKV0 1188 aa14.46□□□□□ -0.1
GARNL3-220ENST00000496711 CBX1P83916 185 aa14.46□□□□□ -0.1
GARNL3-220ENST00000496711 CACNB1Q02641 598 aaPredicted RBP14.46□□□□□ -0.1
GARNL3-220ENST00000496711 HERC4Q5GLZ8 1057 aaPredicted RBP14.46□□□□□ -0.1
GARNL3-220ENST00000496711 TEX35Q5T0J7 233 aa14.46□□□□□ -0.1
GARNL3-220ENST00000496711 POTEAQ6S8J7 498 aa14.46□□□□□ -0.1
GARNL3-220ENST00000496711 ZNF662Q6ZS27 426 aa14.46□□□□□ -0.1
GARNL3-220ENST00000496711 CEP112Q8N8E3 955 aa14.46□□□□□ -0.1
GARNL3-220ENST00000496711 CHURC1Q8WUH1 139 aa14.46□□□□□ -0.1
GARNL3-220ENST00000496711 EIF3CQ99613 913 aaKnown RBP14.46□□□□□ -0.1
GARNL3-220ENST00000496711 TMEM39BQ9GZU3 492 aa14.46□□□□□ -0.1
GARNL3-220ENST00000496711 NHEJ1Q9H9Q4 299 aaPredicted RBP14.46□□□□□ -0.1
GARNL3-220ENST00000496711 RGS17Q9UGC6 210 aaPredicted RBP14.46□□□□□ -0.1
GARNL3-220ENST00000496711 DNM3Q9UQ16 869 aa14.46□□□□□ -0.1
GARNL3-220ENST00000496711 IGLV3-22A0A075B6J6 115 aa14.45□□□□□ -0.1
GARNL3-220ENST00000496711 TRAF5O00463 557 aa14.45□□□□□ -0.1
GARNL3-220ENST00000496711 PLA2G6O60733 806 aa14.45□□□□□ -0.1
GARNL3-220ENST00000496711 GNA14O95837 355 aa14.45□□□□□ -0.1
GARNL3-220ENST00000496711 HNRNPH3P31942 346 aaKnown RBP14.45□□□□□ -0.1
GARNL3-220ENST00000496711 CLCN6P51797 869 aa14.45□□□□□ -0.1
GARNL3-220ENST00000496711 CCDC40Q4G0X9 1142 aa14.45□□□□□ -0.1
GARNL3-220ENST00000496711 ARSHQ5FYA8 562 aa14.45□□□□□ -0.1
GARNL3-220ENST00000496711 CCDC174Q6PII3 467 aa14.45□□□□□ -0.1
GARNL3-220ENST00000496711 PPP4R3CPQ6ZMV5 832 aa14.45□□□□□ -0.1
GARNL3-220ENST00000496711 SRGAP1Q7Z6B7 1085 aa14.45□□□□□ -0.1
GARNL3-220ENST00000496711 KIAA1328Q86T90 577 aa14.45□□□□□ -0.1
GARNL3-220ENST00000496711 FAM160B2Q86V87 743 aa14.45□□□□□ -0.1
GARNL3-220ENST00000496711 CDAN1Q8IWY9 1227 aa14.45□□□□□ -0.1
GARNL3-220ENST00000496711 GPR161Q8N6U8 529 aaKnown RBP14.45□□□□□ -0.1
GARNL3-220ENST00000496711 SYT2Q8N9I0 419 aaPredicted RBP14.45□□□□□ -0.1
GARNL3-220ENST00000496711 GCOM1H8Y6P7 765 aaPredicted RBP14.44□□□□□ -0.1
GARNL3-220ENST00000496711 CFBP00751 764 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 POLR2MP0CAP2 368 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 CAP2P40123 477 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 RAD51AP2Q09MP3 1159 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 PABPC4Q13310 644 aaKnown RBP eCLIP14.44□□□□□ -0.1
GARNL3-220ENST00000496711 NELFCDQ8IXH7 590 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 EHBP1Q8NDI1 1231 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 SCFD1Q8WVM8 642 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 RABGGTAQ92696 567 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 POLR3CQ9BUI4 534 aaPredicted RBP14.44□□□□□ -0.1
GARNL3-220ENST00000496711 TANGO6Q9C0B7 1094 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 KCTD10Q9H3F6 313 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 MMRN2Q9H8L6 949 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 EHMT1Q9H9B1 1298 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 FAM207AQ9NSI2 230 aaPredicted RBP14.44□□□□□ -0.1
GARNL3-220ENST00000496711 EMILIN3Q9NT22 766 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 TRIM10Q9UDY6 481 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 GUCA1BQ9UMX6 200 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 MYH11P35749 1972 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 MEIS1O00470 390 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 EPHB6O15197 1021 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 BAG6P46379 1132 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 MARSP56192 900 aaKnown RBP14.44□□□□□ -0.1
GARNL3-220ENST00000496711 CHMP4BP1P59074 171 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 PSMC6P62333 389 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 GIT2Q14161 759 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 ZYXQ15942 572 aaKnown RBP14.44□□□□□ -0.1
GARNL3-220ENST00000496711 CCDC122Q5T0U0 273 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 ZC3H3Q8IXZ2 948 aaKnown RBP14.44□□□□□ -0.1
GARNL3-220ENST00000496711 KCTD17Q8N5Z5 321 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 CYP2W1Q8TAV3 490 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 JAKMIP2Q96AA8 810 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 ZBED3Q96IU2 234 aaPredicted RBP14.44□□□□□ -0.1
GARNL3-220ENST00000496711 REEP2Q9BRK0 252 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 ZHX3Q9H4I2 956 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 ZNF446Q9NWS9 450 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.44□□□□□ -0.1
GARNL3-220ENST00000496711 PLAGL2Q9UPG8 496 aa14.44□□□□□ -0.1
GARNL3-220ENST00000496711 MRPL11Q9Y3B7 192 aaKnown RBP14.44□□□□□ -0.1
GARNL3-220ENST00000496711 KRT86O43790 486 aa14.43□□□□□ -0.1
GARNL3-220ENST00000496711 WHAMMP3Q1A5X7 153 aa14.43□□□□□ -0.1
GARNL3-220ENST00000496711 EDRF1Q3B7T1 1238 aa14.43□□□□□ -0.1
GARNL3-220ENST00000496711 MIGA2Q7L4E1 593 aa14.43□□□□□ -0.1
GARNL3-220ENST00000496711 NEK11Q8NG66 645 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms