RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 FKBP15Q5T1M5 1219 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 CDKAL1Q5VV42 579 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 KRT26Q7Z3Y9 468 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 MTERF4Q7Z6M4 381 aaKnown RBP7.72□□□□□ -1.17
USP39-219ENST00000496047 MCF2L2Q86YR7 1114 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 GIMAP8Q8ND71 665 aaPredicted RBP7.72□□□□□ -1.17
USP39-219ENST00000496047 KIF18AQ8NI77 898 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 RAD54LQ92698 747 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 STAMQ92783 540 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 DPF2Q92785 391 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 TATDN2Q93075 761 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 C16orf45Q96MC5 204 aaPredicted RBP7.72□□□□□ -1.17
USP39-219ENST00000496047 FAM20AQ96MK3 541 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 MTMR9Q96QG7 549 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 TRIM9Q9C026 710 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 PNMA3Q9UL41 463 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 PRR12Q9ULL5 1215 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 BCS1LQ9Y276 419 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 PCDHAC2Q9Y5I4 1007 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 PPP2R3BQ9Y5P8 575 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 DOCK5Q9H7D0 1870 aa7.72□□□□□ -1.17
USP39-219ENST00000496047 CYP3A7-CYP3A51PA0A087WV96 503 aa7.71□□□□□ -1.18
USP39-219ENST00000496047 PP2D1A8MPX8 630 aa7.71□□□□□ -1.18
USP39-219ENST00000496047 PIK3CDO00329 1044 aa7.71□□□□□ -1.18
USP39-219ENST00000496047 WNT10BO00744 389 aa7.71□□□□□ -1.18
USP39-219ENST00000496047 SLC37A4O43826 429 aa7.71□□□□□ -1.18
USP39-219ENST00000496047 STX10O60499 249 aa7.71□□□□□ -1.18
USP39-219ENST00000496047 PPP1R11O60927 126 aaPredicted RBP7.71□□□□□ -1.18
USP39-219ENST00000496047 IDEP14735 1019 aa7.71□□□□□ -1.18
USP39-219ENST00000496047 BMP6P22004 513 aa7.71□□□□□ -1.18
USP39-219ENST00000496047 CYP3A7P24462 503 aa7.71□□□□□ -1.18
USP39-219ENST00000496047 CDC25AP30304 524 aa7.71□□□□□ -1.18
USP39-219ENST00000496047 MTIF2P46199 727 aaKnown RBP7.71□□□□□ -1.18
USP39-219ENST00000496047 COPB1P53618 953 aaKnown RBP7.71□□□□□ -1.18
USP39-219ENST00000496047 CCZ1BP86790 482 aa7.71□□□□□ -1.18
USP39-219ENST00000496047 CCZ1P86791 482 aaPredicted RBP7.71□□□□□ -1.18
USP39-219ENST00000496047 KIF4BQ2VIQ3 1234 aa7.71□□□□□ -1.18
USP39-219ENST00000496047 TMEM119Q4V9L6 283 aa7.71□□□□□ -1.18
USP39-219ENST00000496047 HYIQ5T013 277 aa7.71□□□□□ -1.18
USP39-219ENST00000496047 FAM83BQ5T0W9 1011 aa7.71□□□□□ -1.18
USP39-219ENST00000496047 CEP135Q66GS9 1140 aa7.71□□□□□ -1.18
USP39-219ENST00000496047 NUDT18Q6ZVK8 323 aa7.71□□□□□ -1.18
USP39-219ENST00000496047 CREBRFQ8IUR6 639 aa7.71□□□□□ -1.18
USP39-219ENST00000496047 ADSSL1Q8N142 457 aa7.71□□□□□ -1.18
USP39-219ENST00000496047 P2RX5Q93086 422 aa7.71□□□□□ -1.18
USP39-219ENST00000496047 KIFC2Q96AC6 838 aa7.71□□□□□ -1.18
USP39-219ENST00000496047 PANX2Q96RD6 677 aa7.71□□□□□ -1.18
USP39-219ENST00000496047 PLIN2Q99541 437 aa7.71□□□□□ -1.18
USP39-219ENST00000496047 BAG1Q99933 345 aaPredicted RBP7.71□□□□□ -1.18
USP39-219ENST00000496047 NUP58Q9BVL2 599 aa7.71□□□□□ -1.18
USP39-219ENST00000496047 ZNF341Q9BYN7 854 aa7.71□□□□□ -1.18
USP39-219ENST00000496047 RANBP17Q9H2T7 1088 aaKnown RBP7.71□□□□□ -1.18
USP39-219ENST00000496047 SAMSN1Q9NSI8 373 aaKnown RBP7.71□□□□□ -1.18
USP39-219ENST00000496047 MAP3K20Q9NYL2 800 aaKnown RBP7.71□□□□□ -1.18
USP39-219ENST00000496047 LIMA1Q9UHB6 759 aaKnown RBP7.71□□□□□ -1.18
USP39-219ENST00000496047 MYH10P35580 1976 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 RCCD1A6NED2 376 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 USP17L15C9J2P7 530 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 USP17L13C9JLJ4 530 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 USP17L11C9JVI0 530 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 USP17L18D6R9N7 530 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 USP17L22D6RA61 530 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 USP17L17D6RBQ6 530 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 USP17L19D6RCP7 530 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 USP17L20D6RJB6 530 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 ADAMTS3O15072 1205 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 CTNND1O60716 968 aaKnown RBP7.7□□□□□ -1.18
USP39-219ENST00000496047 IPO7O95373 1038 aaKnown RBP7.7□□□□□ -1.18
USP39-219ENST00000496047 CFBP00751 764 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 SSBP05455 408 aaKnown RBP eCLIP7.7□□□□□ -1.18
USP39-219ENST00000496047 CYP3A4P08684 503 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 MUTP22033 750 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 CASP1P29466 404 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 PRCPP42785 496 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 DNM2P50570 870 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 ZNF280AP59817 542 aaPredicted RBP7.7□□□□□ -1.18
USP39-219ENST00000496047 LRRC63Q05C16 580 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 USP17L24Q0WX57 530 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 GRB10Q13322 594 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 ZYXQ15942 572 aaKnown RBP7.7□□□□□ -1.18
USP39-219ENST00000496047 PRR16Q569H4 304 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 NAALADL2Q58DX5 795 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 HSP90AA4PQ58FG1 418 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 TCP11X2Q5H9J9 407 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 NCAPH2Q6IBW4 605 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 CCDC174Q6PII3 467 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 FOXR2Q6PJQ5 311 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 USP17L6PQ6QN14 398 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 STXBP4Q6ZWJ1 553 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 SMYD4Q8IYR2 804 aaPredicted RBP7.7□□□□□ -1.18
USP39-219ENST00000496047 SPICE1Q8N0Z3 855 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 CCAR2Q8N163 923 aaKnown RBP7.7□□□□□ -1.18
USP39-219ENST00000496047 CSGALNACT2Q8N6G5 542 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 ZNF397Q8NF99 534 aaPredicted RBP7.7□□□□□ -1.18
USP39-219ENST00000496047 ANKK1Q8NFD2 765 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 MYRIPQ8NFW9 859 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 NEK9Q8TD19 979 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 ZBED3Q96IU2 234 aaPredicted RBP7.7□□□□□ -1.18
USP39-219ENST00000496047 PCMTD1Q96MG8 357 aaPredicted RBP7.7□□□□□ -1.18
USP39-219ENST00000496047 MBOAT7Q96N66 472 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms