RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 SETQ01105 290 aaPredicted RBP18.43■□□□□ 0.54
ATG4B-225ENST00000494465 PRKG1Q13976 671 aa18.43■□□□□ 0.54
ATG4B-225ENST00000494465 FILIP1LQ4L180 1135 aa18.43■□□□□ 0.54
ATG4B-225ENST00000494465 C9orf131Q5VYM1 1079 aa18.43■□□□□ 0.54
ATG4B-225ENST00000494465 B3GNT9Q6UX72 402 aa18.43■□□□□ 0.54
ATG4B-225ENST00000494465 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.43■□□□□ 0.54
ATG4B-225ENST00000494465 GPBP1Q86WP2 473 aa18.43■□□□□ 0.54
ATG4B-225ENST00000494465 TMEM139Q8IV31 216 aa18.43■□□□□ 0.54
ATG4B-225ENST00000494465 GUF1Q8N442 669 aaKnown RBP18.43■□□□□ 0.54
ATG4B-225ENST00000494465 HSD17B14Q9BPX1 270 aa18.43■□□□□ 0.54
ATG4B-225ENST00000494465 VPS16Q9H269 839 aa18.43■□□□□ 0.54
ATG4B-225ENST00000494465 MAP3K20Q9NYL2 800 aaKnown RBP18.43■□□□□ 0.54
ATG4B-225ENST00000494465 RPS6P62753 249 aaKnown RBP18.42■□□□□ 0.54
ATG4B-225ENST00000494465 CYP4A11Q02928 519 aa18.42■□□□□ 0.54
ATG4B-225ENST00000494465 CSGALNACT2Q8N6G5 542 aa18.42■□□□□ 0.54
ATG4B-225ENST00000494465 SAMD3Q8N6K7 520 aa18.42■□□□□ 0.54
ATG4B-225ENST00000494465 PANK4Q9NVE7 773 aa18.42■□□□□ 0.54
ATG4B-225ENST00000494465 RGL1Q9NZL6 768 aa18.42■□□□□ 0.54
ATG4B-225ENST00000494465 RIPK3Q9Y572 518 aa18.42■□□□□ 0.54
ATG4B-225ENST00000494465 PCDHA2Q9Y5H9 948 aa18.42■□□□□ 0.54
ATG4B-225ENST00000494465 SNCAIPQ9Y6H5 919 aa18.42■□□□□ 0.54
ATG4B-225ENST00000494465 FRMD3A2A2Y4 597 aa18.42■□□□□ 0.54
ATG4B-225ENST00000494465 ADM5C9JUS6 153 aa18.42■□□□□ 0.54
ATG4B-225ENST00000494465 EEF1GP26641 437 aaKnown RBP18.42■□□□□ 0.54
ATG4B-225ENST00000494465 HOXA7P31268 230 aaPredicted RBP18.42■□□□□ 0.54
ATG4B-225ENST00000494465 DSG3P32926 999 aa18.42■□□□□ 0.54
ATG4B-225ENST00000494465 KCNJ6P48051 423 aa18.42■□□□□ 0.54
ATG4B-225ENST00000494465 SYT2Q8N9I0 419 aaPredicted RBP18.42■□□□□ 0.54
ATG4B-225ENST00000494465 NOC3LQ8WTT2 800 aaKnown RBP18.42■□□□□ 0.54
ATG4B-225ENST00000494465 TRERF1Q96PN7 1200 aa18.42■□□□□ 0.54
ATG4B-225ENST00000494465 PNMA2Q9UL42 364 aa18.42■□□□□ 0.54
ATG4B-225ENST00000494465 N4BP3O15049 544 aa18.41■□□□□ 0.54
ATG4B-225ENST00000494465 BCRP11274 1271 aa18.41■□□□□ 0.54
ATG4B-225ENST00000494465 ZNF577Q9BSK1 485 aa18.41■□□□□ 0.54
ATG4B-225ENST00000494465 BMP2KQ9NSY1 1161 aaPredicted RBP18.41■□□□□ 0.54
ATG4B-225ENST00000494465 DNM3Q9UQ16 869 aa18.41■□□□□ 0.54
ATG4B-225ENST00000494465 GAS7O60861 476 aa18.41■□□□□ 0.54
ATG4B-225ENST00000494465 SLITRK3O94933 977 aa18.41■□□□□ 0.54
ATG4B-225ENST00000494465 MRPS9P82933 396 aaKnown RBP18.41■□□□□ 0.54
ATG4B-225ENST00000494465 PABPC4Q13310 644 aaKnown RBP eCLIP18.41■□□□□ 0.54
ATG4B-225ENST00000494465 VGLL4Q14135 290 aa18.41■□□□□ 0.54
ATG4B-225ENST00000494465 CEP135Q66GS9 1140 aa18.41■□□□□ 0.54
ATG4B-225ENST00000494465 E4F1Q66K89 784 aaPredicted RBP18.41■□□□□ 0.54
ATG4B-225ENST00000494465 CATSPERGQ6ZRH7 1159 aa18.41■□□□□ 0.54
ATG4B-225ENST00000494465 TAAR1Q96RJ0 339 aa18.41■□□□□ 0.54
ATG4B-225ENST00000494465 FGFBP2Q9BYJ0 223 aa18.41■□□□□ 0.54
ATG4B-225ENST00000494465 ZNF214Q9UL59 606 aaPredicted RBP18.41■□□□□ 0.54
ATG4B-225ENST00000494465 ITIH6Q6UXX5 1313 aa18.41■□□□□ 0.54
ATG4B-225ENST00000494465 ADKP55263 362 aaKnown RBP18.4■□□□□ 0.54
ATG4B-225ENST00000494465 CACNB1Q02641 598 aaPredicted RBP18.4■□□□□ 0.54
ATG4B-225ENST00000494465 SH3D19Q5HYK7 790 aa18.4■□□□□ 0.54
ATG4B-225ENST00000494465 PCNX4Q63HM2 1172 aa18.4■□□□□ 0.54
ATG4B-225ENST00000494465 NIPA1Q7RTP0 329 aa18.4■□□□□ 0.54
ATG4B-225ENST00000494465 CCAR2Q8N163 923 aaKnown RBP18.4■□□□□ 0.54
ATG4B-225ENST00000494465 CCDC112Q8NEF3 446 aa18.4■□□□□ 0.54
ATG4B-225ENST00000494465 ANKRD20A12PQ8NF67 263 aa18.4■□□□□ 0.54
ATG4B-225ENST00000494465 EEF2KMTQ96G04 330 aa18.4■□□□□ 0.54
ATG4B-225ENST00000494465 UNC45AQ9H3U1 944 aa18.4■□□□□ 0.54
ATG4B-225ENST00000494465 TUFT1Q9NNX1 390 aa18.4■□□□□ 0.54
ATG4B-225ENST00000494465 CTDP1Q9Y5B0 961 aaPredicted RBP18.4■□□□□ 0.54
ATG4B-225ENST00000494465 UBIAD1Q9Y5Z9 338 aa18.4■□□□□ 0.54
ATG4B-225ENST00000494465 IPO5O00410 1097 aaKnown RBP18.4■□□□□ 0.54
ATG4B-225ENST00000494465 COG2Q14746 738 aa18.4■□□□□ 0.54
ATG4B-225ENST00000494465 LRRC41Q15345 812 aa18.4■□□□□ 0.54
ATG4B-225ENST00000494465 DNTTIP2Q5QJE6 756 aaKnown RBP18.4■□□□□ 0.54
ATG4B-225ENST00000494465 FAM26FQ5R3K3 315 aa18.4■□□□□ 0.54
ATG4B-225ENST00000494465 KCTD17Q8N5Z5 321 aa18.4■□□□□ 0.54
ATG4B-225ENST00000494465 DCPSQ96C86 337 aaKnown RBP18.4■□□□□ 0.54
ATG4B-225ENST00000494465 R3HCC1Q9Y3T6 440 aaKnown RBP18.4■□□□□ 0.54
ATG4B-225ENST00000494465 LOC285556D6RIA3 1793 aa18.39■□□□□ 0.54
ATG4B-225ENST00000494465 CHMP2AO43633 222 aa18.39■□□□□ 0.53
ATG4B-225ENST00000494465 OAZ1P54368 228 aa18.39■□□□□ 0.53
ATG4B-225ENST00000494465 MAP3K9P80192 1104 aa18.39■□□□□ 0.53
ATG4B-225ENST00000494465 GIT2Q14161 759 aa18.39■□□□□ 0.53
ATG4B-225ENST00000494465 CTTNQ14247 550 aaKnown RBP18.39■□□□□ 0.53
ATG4B-225ENST00000494465 KRT26Q7Z3Y9 468 aa18.39■□□□□ 0.53
ATG4B-225ENST00000494465 CREBRFQ8IUR6 639 aa18.39■□□□□ 0.53
ATG4B-225ENST00000494465 CCDC65Q8IXS2 484 aa18.39■□□□□ 0.53
ATG4B-225ENST00000494465 DYDC2Q96IM9 177 aa18.39■□□□□ 0.53
ATG4B-225ENST00000494465 WDR11Q9BZH6 1224 aa18.39■□□□□ 0.53
ATG4B-225ENST00000494465 KCNH7Q9NS40 1196 aa18.39■□□□□ 0.53
ATG4B-225ENST00000494465 RNF146Q9NTX7 359 aa18.39■□□□□ 0.53
ATG4B-225ENST00000494465 RBL2Q08999 1139 aa18.39■□□□□ 0.53
ATG4B-225ENST00000494465 RAD51AP2Q09MP3 1159 aa18.39■□□□□ 0.53
ATG4B-225ENST00000494465 TMEM132BQ14DG7 1078 aa18.39■□□□□ 0.53
ATG4B-225ENST00000494465 TKFCQ3LXA3 575 aa18.39■□□□□ 0.53
ATG4B-225ENST00000494465 RNF207Q6ZRF8 634 aa18.39■□□□□ 0.53
ATG4B-225ENST00000494465 SULF1Q8IWU6 871 aa18.39■□□□□ 0.53
ATG4B-225ENST00000494465 ZNF507Q8TCN5 953 aa18.39■□□□□ 0.53
ATG4B-225ENST00000494465 PURBQ96QR8 312 aaKnown RBP18.39■□□□□ 0.53
ATG4B-225ENST00000494465 RIT2Q99578 217 aa18.39■□□□□ 0.53
ATG4B-225ENST00000494465 TMOD4Q9NZQ9 345 aa18.39■□□□□ 0.53
ATG4B-225ENST00000494465 LGALS16A8MUM7 142 aa18.38■□□□□ 0.53
ATG4B-225ENST00000494465 ATP2A1O14983 1001 aa18.38■□□□□ 0.53
ATG4B-225ENST00000494465 NKRFO15226 690 aaKnown RBP eCLIP18.38■□□□□ 0.539e-11■■□□□ 11.5
ATG4B-225ENST00000494465 DHX15O43143 795 aaKnown RBP18.38■□□□□ 0.53
ATG4B-225ENST00000494465 EYA4O95677 639 aa18.38■□□□□ 0.53
ATG4B-225ENST00000494465 PGM5Q15124 567 aa18.38■□□□□ 0.53
ATG4B-225ENST00000494465 ZCWPW2Q504Y3 356 aa18.38■□□□□ 0.53
ATG4B-225ENST00000494465 FOXR2Q6PJQ5 311 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms