RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 EIF2AK2P19525 551 aaKnown RBP11.26□□□□□ -0.61
HDAC9-225ENST00000490851 PDE4DQ08499 809 aa11.26□□□□□ -0.61
HDAC9-225ENST00000490851 RAD51AP2Q09MP3 1159 aa11.26□□□□□ -0.61
HDAC9-225ENST00000490851 ARID5BQ14865 1188 aa11.26□□□□□ -0.61
HDAC9-225ENST00000490851 TPD52L1Q16890 204 aaPredicted RBP11.26□□□□□ -0.61
HDAC9-225ENST00000490851 ZNF658Q5TYW1 1059 aaPredicted RBP11.26□□□□□ -0.61
HDAC9-225ENST00000490851 RAD54LQ92698 747 aa11.26□□□□□ -0.61
HDAC9-225ENST00000490851 MRFAP1L1Q96HT8 127 aa11.26□□□□□ -0.61
HDAC9-225ENST00000490851 EXOC1Q9NV70 894 aa11.26□□□□□ -0.61
HDAC9-225ENST00000490851 PHIPQ8WWQ0 1821 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 C19orf81C9J6K1 198 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 DDX39AO00148 427 aaKnown RBP11.25□□□□□ -0.61
HDAC9-225ENST00000490851 CYP3A4P08684 503 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 IDEP14735 1019 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 CIITAP33076 1130 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 PRCPP42785 496 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 HSD17B4P51659 736 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 UBASH3AP57075 661 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 RPS6P62753 249 aaKnown RBP11.25□□□□□ -0.61
HDAC9-225ENST00000490851 LRMPQ12912 555 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 ZRSR2Q15696 482 aaKnown RBP11.25□□□□□ -0.61
HDAC9-225ENST00000490851 TMEM119Q4V9L6 283 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 NOL9Q5SY16 702 aaKnown RBP11.25□□□□□ -0.61
HDAC9-225ENST00000490851 TREML2Q5T2D2 321 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 GADL1Q6ZQY3 521 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 TMC6Q7Z403 805 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.25□□□□□ -0.61
HDAC9-225ENST00000490851 C17orf53Q8N3J3 647 aaPredicted RBP11.25□□□□□ -0.61
HDAC9-225ENST00000490851 ENOX1Q8TC92 643 aaKnown RBP11.25□□□□□ -0.61
HDAC9-225ENST00000490851 NELFBQ8WX92 580 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 KCNF1Q9H3M0 494 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 ZNF408Q9H9D4 720 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 MAGEF1Q9HAY2 307 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 RNF146Q9NTX7 359 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 STK17AQ9UEE5 414 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 CLEC11AQ9Y240 323 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 RPS6KL1Q9Y6S9 549 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 KLHL33A6NCF5 533 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 ARP10275 920 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 FCER1AP12319 257 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 ERCC5P28715 1186 aaPredicted RBP11.25□□□□□ -0.61
HDAC9-225ENST00000490851 IREB2P48200 963 aaKnown RBP11.25□□□□□ -0.61
HDAC9-225ENST00000490851 AMPD3Q01432 767 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 CACNB1Q02641 598 aaPredicted RBP11.25□□□□□ -0.61
HDAC9-225ENST00000490851 SPIRE1Q08AE8 756 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 CEP55Q53EZ4 464 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 LRCH2Q5VUJ6 765 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 MCF2L2Q86YR7 1114 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 MNS1Q8NEH6 495 aa11.25□□□□□ -0.61
HDAC9-225ENST00000490851 SYTL5Q8TDW5 730 aaPredicted RBP11.25□□□□□ -0.61
HDAC9-225ENST00000490851 TRIM49BA6NDI0 452 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 GLTPD2A6NH11 291 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 POTEJP0CG39 1038 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 MYCLP12524 364 aaPredicted RBP11.24□□□□□ -0.61
HDAC9-225ENST00000490851 CDC25BP30305 580 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 DSG3P32926 999 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 NF2P35240 595 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 PAK1Q13153 545 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 COG2Q14746 738 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 CATSPERGQ6ZRH7 1159 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 USP50Q70EL3 339 aaPredicted RBP11.24□□□□□ -0.61
HDAC9-225ENST00000490851 APBB1IPQ7Z5R6 666 aaPredicted RBP11.24□□□□□ -0.61
HDAC9-225ENST00000490851 CCDC47Q96A33 483 aaKnown RBP11.24□□□□□ -0.61
HDAC9-225ENST00000490851 L3MBTL3Q96JM7 780 aaPredicted RBP11.24□□□□□ -0.61
HDAC9-225ENST00000490851 FAM20AQ96MK3 541 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 TAAR1Q96RJ0 339 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 C7orf25Q9BPX7 421 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 COL11A1P12107 1806 aaPredicted RBP11.24□□□□□ -0.61
HDAC9-225ENST00000490851 OTOFQ9HC10 1997 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 KDM3AQ9Y4C1 1321 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 NPHP3-ACAD11A0A0J9YXS1 232 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 EML1O00423 815 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 KIF3CO14782 793 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 TBX3O15119 743 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 GAS7O60861 476 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 TMEM132BQ14DG7 1078 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 SPATA1Q5VX52 437 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 RNF207Q6ZRF8 634 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 CATSPER3Q86XQ3 398 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 DDX12PQ92771 950 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 EEF2KMTQ96G04 330 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 C12orf42Q96LP6 360 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 ZNF577Q9BSK1 485 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 SLC39A2Q9NP94 309 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 RGL1Q9NZL6 768 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 VAV3Q9UKW4 847 aa11.24□□□□□ -0.61
HDAC9-225ENST00000490851 RHOBTB3O94955 611 aa11.23□□□□□ -0.61
HDAC9-225ENST00000490851 MYL1P05976 194 aa11.23□□□□□ -0.61
HDAC9-225ENST00000490851 PSMC6P62333 389 aa11.23□□□□□ -0.61
HDAC9-225ENST00000490851 STK4Q13043 487 aa11.23□□□□□ -0.61
HDAC9-225ENST00000490851 BAATQ14032 418 aaPredicted RBP11.23□□□□□ -0.61
HDAC9-225ENST00000490851 C1QTNF12Q5T7M4 302 aa11.23□□□□□ -0.61
HDAC9-225ENST00000490851 HAUS3Q68CZ6 603 aa11.23□□□□□ -0.61
HDAC9-225ENST00000490851 ERMNQ8TAM6 284 aa11.23□□□□□ -0.61
HDAC9-225ENST00000490851 WDR11Q9BZH6 1224 aa11.23□□□□□ -0.61
HDAC9-225ENST00000490851 NT5C3AQ9H0P0 336 aa11.23□□□□□ -0.61
HDAC9-225ENST00000490851 ZHX3Q9H4I2 956 aa11.23□□□□□ -0.61
HDAC9-225ENST00000490851 TAF1DQ9H5J8 278 aaPredicted RBP11.23□□□□□ -0.61
HDAC9-225ENST00000490851 PARP14Q460N5 1801 aa11.23□□□□□ -0.61
HDAC9-225ENST00000490851 TESPA1A2RU30 521 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms