RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 SMIM5Q71RC9 77 aa5.87□□□□□ -1.47
CSTF1-205ENST00000490539 PPP1R42Q7Z4L9 355 aa5.87□□□□□ -1.47
CSTF1-205ENST00000490539 NT5DC4Q86YG4 428 aa5.87□□□□□ -1.47
CSTF1-205ENST00000490539 TMEM40Q8WWA1 233 aa5.87□□□□□ -1.47
CSTF1-205ENST00000490539 DHRS1Q96LJ7 313 aa5.87□□□□□ -1.47
CSTF1-205ENST00000490539 CRBNQ96SW2 442 aa5.87□□□□□ -1.47
CSTF1-205ENST00000490539 CNNM2Q9H8M5 875 aa5.87□□□□□ -1.47
CSTF1-205ENST00000490539 ATP13A1Q9HD20 1204 aa5.87□□□□□ -1.47
CSTF1-205ENST00000490539 SEMA3GQ9NS98 782 aa5.87□□□□□ -1.47
CSTF1-205ENST00000490539 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.87□□□□□ -1.47
CSTF1-205ENST00000490539 CICQ96RK0 1608 aaPredicted RBP5.87□□□□□ -1.47
CSTF1-205ENST00000490539 SIPA1L3O60292 1781 aaPredicted RBP5.87□□□□□ -1.47
CSTF1-205ENST00000490539 UBR2Q8IWV8 1755 aa5.87□□□□□ -1.47
CSTF1-205ENST00000490539 TJP1Q07157 1748 aa5.86□□□□□ -1.47
CSTF1-205ENST00000490539 PXDNLA1KZ92 1463 aa5.86□□□□□ -1.47
CSTF1-205ENST00000490539 C10orf71Q711Q0 1435 aa5.86□□□□□ -1.47
CSTF1-205ENST00000490539 MAP3K15Q6ZN16 1313 aa5.86□□□□□ -1.47
CSTF1-205ENST00000490539 PRAMEF22A3QJZ6 481 aa5.86□□□□□ -1.47
CSTF1-205ENST00000490539 DBX1A6NMT0 343 aa5.86□□□□□ -1.47
CSTF1-205ENST00000490539 E9PSI1 815 aa5.86□□□□□ -1.47
CSTF1-205ENST00000490539 CLEC3AO75596 197 aa5.86□□□□□ -1.47
CSTF1-205ENST00000490539 CAMTA2O94983 1202 aa5.86□□□□□ -1.47
CSTF1-205ENST00000490539 TM4SF1P30408 202 aa5.86□□□□□ -1.47
CSTF1-205ENST00000490539 PIP4K2AP48426 406 aaPredicted RBP5.86□□□□□ -1.47
CSTF1-205ENST00000490539 NEXNQ0ZGT2 675 aa5.86□□□□□ -1.47
CSTF1-205ENST00000490539 AIMP1Q12904 312 aaKnown RBP5.86□□□□□ -1.47
CSTF1-205ENST00000490539 NFIXQ14938 502 aa5.86□□□□□ -1.47
CSTF1-205ENST00000490539 TWISTNBQ3B726 338 aaPredicted RBP5.86□□□□□ -1.47
CSTF1-205ENST00000490539 DALRD3Q5D0E6 543 aaKnown RBP5.86□□□□□ -1.47
CSTF1-205ENST00000490539 ZNF648Q5T619 568 aaPredicted RBP5.86□□□□□ -1.47
CSTF1-205ENST00000490539 ATG4DQ86TL0 474 aaPredicted RBP5.86□□□□□ -1.47
CSTF1-205ENST00000490539 AMIGO3Q86WK7 504 aa5.86□□□□□ -1.47
CSTF1-205ENST00000490539 DTWD2Q8NBA8 298 aa5.86□□□□□ -1.47
CSTF1-205ENST00000490539 ATG4CQ96DT6 458 aa5.86□□□□□ -1.47
CSTF1-205ENST00000490539 IPO9Q96P70 1041 aaKnown RBP5.86□□□□□ -1.47
CSTF1-205ENST00000490539 GPR62Q9BZJ7 368 aa5.86□□□□□ -1.47
CSTF1-205ENST00000490539 CARS2Q9HA77 564 aaKnown RBP5.86□□□□□ -1.47
CSTF1-205ENST00000490539 CHPF2Q9P2E5 772 aa5.86□□□□□ -1.47
CSTF1-205ENST00000490539 MYH14Q7Z406 1995 aaKnown RBP5.86□□□□□ -1.47
CSTF1-205ENST00000490539 TUBGCP6Q96RT7 1819 aa5.85□□□□□ -1.47
CSTF1-205ENST00000490539 VCANP13611 3396 aa5.85□□□□□ -1.47
CSTF1-205ENST00000490539 MEIS3P2A8K0S8 358 aa5.85□□□□□ -1.47
CSTF1-205ENST00000490539 POLRMTO00411 1230 aaKnown RBP5.85□□□□□ -1.47
CSTF1-205ENST00000490539 RNASE1P07998 156 aaKnown RBP5.85□□□□□ -1.47
CSTF1-205ENST00000490539 ZNF853P0CG23 659 aa5.85□□□□□ -1.47
CSTF1-205ENST00000490539 TPP2P29144 1249 aaPredicted RBP5.85□□□□□ -1.47
CSTF1-205ENST00000490539 RACK1P63244 317 aaKnown RBP5.85□□□□□ -1.47
CSTF1-205ENST00000490539 SOGA3Q5TF21 947 aa5.85□□□□□ -1.47
CSTF1-205ENST00000490539 TBC1D9BQ66K14 1250 aa5.85□□□□□ -1.47
CSTF1-205ENST00000490539 COPS6Q7L5N1 327 aa5.85□□□□□ -1.47
CSTF1-205ENST00000490539 SMC1BQ8NDV3 1235 aa5.85□□□□□ -1.47
CSTF1-205ENST00000490539 PLBD2Q8NHP8 589 aa5.85□□□□□ -1.47
CSTF1-205ENST00000490539 ENOX1Q8TC92 643 aaKnown RBP5.85□□□□□ -1.47
CSTF1-205ENST00000490539 TSR2Q969E8 191 aaKnown RBP5.85□□□□□ -1.47
CSTF1-205ENST00000490539 ZNF428Q96B54 188 aa5.85□□□□□ -1.47
CSTF1-205ENST00000490539 Q96M66 194 aa5.85□□□□□ -1.47
CSTF1-205ENST00000490539 BRIP1Q9BX63 1249 aa5.85□□□□□ -1.47
CSTF1-205ENST00000490539 CCSER2Q9H7U1 834 aa5.85□□□□□ -1.47
CSTF1-205ENST00000490539 MBNL3Q9NUK0 354 aaKnown RBP5.85□□□□□ -1.47
CSTF1-205ENST00000490539 KIAA1522Q9P206 1035 aaPredicted RBP5.85□□□□□ -1.47
CSTF1-205ENST00000490539 UNC80Q8N2C7 3258 aa5.84□□□□□ -1.47
CSTF1-205ENST00000490539 A0A0G2JLW4 131 aa5.84□□□□□ -1.47
CSTF1-205ENST00000490539 UNCXA6NJT0 531 aa5.84□□□□□ -1.47
CSTF1-205ENST00000490539 TCERG1O14776 1098 aaKnown RBP5.84□□□□□ -1.47
CSTF1-205ENST00000490539 DNAJA2O60884 412 aa5.84□□□□□ -1.47
CSTF1-205ENST00000490539 NME1P15531 152 aaKnown RBP5.84□□□□□ -1.47
CSTF1-205ENST00000490539 ALDH1B1P30837 517 aa5.84□□□□□ -1.47
CSTF1-205ENST00000490539 DEKP35659 375 aaKnown RBP5.84□□□□□ -1.47
CSTF1-205ENST00000490539 AFMP43652 599 aa5.84□□□□□ -1.47
CSTF1-205ENST00000490539 RRP1P56182 461 aaKnown RBP5.84□□□□□ -1.47
CSTF1-205ENST00000490539 HDLBPQ00341 1268 aaKnown RBP5.84□□□□□ -1.47
CSTF1-205ENST00000490539 PAK2Q13177 524 aa5.84□□□□□ -1.47
CSTF1-205ENST00000490539 ZNF124Q15973 351 aa5.84□□□□□ -1.47
CSTF1-205ENST00000490539 INTS3Q68E01 1043 aaKnown RBP5.84□□□□□ -1.47
CSTF1-205ENST00000490539 SPOCD1Q6ZMY3 1216 aa5.84□□□□□ -1.47
CSTF1-205ENST00000490539 METTL16Q86W50 562 aaKnown RBP5.84□□□□□ -1.47
CSTF1-205ENST00000490539 C2CD5Q86YS7 1000 aa5.84□□□□□ -1.47
CSTF1-205ENST00000490539 CREG2Q8IUH2 290 aa5.84□□□□□ -1.47
CSTF1-205ENST00000490539 TTLL6Q8N841 843 aa5.84□□□□□ -1.47
CSTF1-205ENST00000490539 RPGRQ92834 1020 aaKnown RBP5.84□□□□□ -1.47
CSTF1-205ENST00000490539 ZNF622Q969S3 477 aaKnown RBP eCLIP5.84□□□□□ -1.47
CSTF1-205ENST00000490539 GPRASP2Q96D09 838 aa5.84□□□□□ -1.47
CSTF1-205ENST00000490539 TM9SF2Q99805 663 aa5.84□□□□□ -1.47
CSTF1-205ENST00000490539 UTP14AQ9BVJ6 771 aaKnown RBP5.84□□□□□ -1.47
CSTF1-205ENST00000490539 KRTAP17-1Q9BYP8 105 aa5.84□□□□□ -1.47
CSTF1-205ENST00000490539 KRTAP4-5Q9BYR2 181 aa5.84□□□□□ -1.47
CSTF1-205ENST00000490539 TGIF2Q9GZN2 237 aa5.84□□□□□ -1.47
CSTF1-205ENST00000490539 TRMT112Q9UI30 125 aaKnown RBP5.84□□□□□ -1.47
CSTF1-205ENST00000490539 DUSP13Q9UII6 198 aa5.84□□□□□ -1.47
CSTF1-205ENST00000490539 ZNRF3Q9ULT6 936 aa5.84□□□□□ -1.47
CSTF1-205ENST00000490539 KDM3BQ7LBC6 1761 aa5.84□□□□□ -1.47
CSTF1-205ENST00000490539 SPTBN5Q9NRC6 3674 aaKnown RBP5.84□□□□□ -1.48
CSTF1-205ENST00000490539 LAMB4A4D0S4 1761 aa5.83□□□□□ -1.48
CSTF1-205ENST00000490539 C4AP0C0L4 1744 aa5.83□□□□□ -1.48
CSTF1-205ENST00000490539 SSU72P8A0A1W2PR75 194 aa5.83□□□□□ -1.48
CSTF1-205ENST00000490539 CT47B1P0C2W7 299 aaPredicted RBP5.83□□□□□ -1.48
CSTF1-205ENST00000490539 RAC2P15153 192 aa5.83□□□□□ -1.48
CSTF1-205ENST00000490539 DPEP1P16444 411 aa5.83□□□□□ -1.48
CSTF1-205ENST00000490539 GPTP24298 496 aa5.83□□□□□ -1.48
CSTF1-205ENST00000490539 EXOSC9Q06265 439 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms