RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 GHRHRQ02643 423 aa17.8■□□□□ 0.44
PCCB-218ENST00000490504 SHHQ15465 462 aa17.8■□□□□ 0.44
PCCB-218ENST00000490504 C9orf50Q5SZB4 431 aa17.8■□□□□ 0.44
PCCB-218ENST00000490504 LRSAM1Q6UWE0 723 aa17.8■□□□□ 0.44
PCCB-218ENST00000490504 GAS2L3Q86XJ1 694 aa17.8■□□□□ 0.44
PCCB-218ENST00000490504 FAM126BQ8IXS8 530 aa17.8■□□□□ 0.44
PCCB-218ENST00000490504 SLC43A3Q8NBI5 491 aa17.8■□□□□ 0.44
PCCB-218ENST00000490504 OR6J1Q8NGC5 347 aa17.8■□□□□ 0.44
PCCB-218ENST00000490504 PIBF1Q8WXW3 757 aa17.8■□□□□ 0.44
PCCB-218ENST00000490504 SPZ1Q9BXG8 430 aa17.8■□□□□ 0.44
PCCB-218ENST00000490504 BRMS1Q9HCU9 246 aa17.8■□□□□ 0.44
PCCB-218ENST00000490504 TBX21Q9UL17 535 aa17.8■□□□□ 0.44
PCCB-218ENST00000490504 MROH7Q68CQ1 1323 aa17.8■□□□□ 0.44
PCCB-218ENST00000490504 PNMA6FA0A0J9YX94 578 aa17.8■□□□□ 0.44
PCCB-218ENST00000490504 TXNP10599 105 aaKnown RBP17.8■□□□□ 0.44
PCCB-218ENST00000490504 LIG1P18858 919 aa17.8■□□□□ 0.44
PCCB-218ENST00000490504 SMARCA1P28370 1054 aa17.8■□□□□ 0.44
PCCB-218ENST00000490504 HOXA13P31271 388 aaPredicted RBP17.8■□□□□ 0.44
PCCB-218ENST00000490504 EPHB4P54760 987 aa17.8■□□□□ 0.44
PCCB-218ENST00000490504 PSMC6P62333 389 aa17.8■□□□□ 0.44
PCCB-218ENST00000490504 ITGA7Q13683 1181 aa17.8■□□□□ 0.44
PCCB-218ENST00000490504 ARHGEF16Q5VV41 709 aa17.8■□□□□ 0.44
PCCB-218ENST00000490504 SEPT14Q6ZU15 432 aa17.8■□□□□ 0.44
PCCB-218ENST00000490504 IWS1Q96ST2 819 aa17.8■□□□□ 0.44
PCCB-218ENST00000490504 PXMP2Q9NR77 195 aa17.8■□□□□ 0.44
PCCB-218ENST00000490504 NKRFO15226 690 aaKnown RBP eCLIP17.79■□□□□ 0.44
PCCB-218ENST00000490504 SPTLC2O15270 562 aa17.79■□□□□ 0.44
PCCB-218ENST00000490504 ME1P48163 572 aa17.79■□□□□ 0.44
PCCB-218ENST00000490504 MRE11P49959 708 aa17.79■□□□□ 0.44
PCCB-218ENST00000490504 SF3A1Q15459 793 aaKnown RBP17.79■□□□□ 0.44
PCCB-218ENST00000490504 STXBP2Q15833 593 aa17.79■□□□□ 0.44
PCCB-218ENST00000490504 CCDC62Q6P9F0 684 aa17.79■□□□□ 0.44
PCCB-218ENST00000490504 SH3GLB2Q9NR46 395 aa17.79■□□□□ 0.44
PCCB-218ENST00000490504 DDX19AQ9NUU7 478 aaKnown RBP17.79■□□□□ 0.44
PCCB-218ENST00000490504 TIMP1P01033 207 aa17.78■□□□□ 0.44
PCCB-218ENST00000490504 CD4P01730 458 aa17.78■□□□□ 0.44
PCCB-218ENST00000490504 NR3C2P08235 984 aa17.78■□□□□ 0.44
PCCB-218ENST00000490504 MYL3P08590 195 aa17.78■□□□□ 0.44
PCCB-218ENST00000490504 TTLL4Q14679 1199 aa17.78■□□□□ 0.44
PCCB-218ENST00000490504 SLC39A14Q15043 492 aa17.78■□□□□ 0.44
PCCB-218ENST00000490504 CPT1AP50416 773 aa17.77■□□□□ 0.44
PCCB-218ENST00000490504 PURAQ00577 322 aaKnown RBP17.77■□□□□ 0.44
PCCB-218ENST00000490504 NR5A1Q13285 461 aa17.77■□□□□ 0.44
PCCB-218ENST00000490504 LY6KQ17RY6 165 aa17.77■□□□□ 0.44
PCCB-218ENST00000490504 RILPL1Q5EBL4 403 aa17.77■□□□□ 0.44
PCCB-218ENST00000490504 FAM177A1Q8N128 213 aaPredicted RBP17.77■□□□□ 0.44
PCCB-218ENST00000490504 OXER1Q8TDS5 423 aa17.77■□□□□ 0.44
PCCB-218ENST00000490504 GRPEL1Q9HAV7 217 aa17.77■□□□□ 0.44
PCCB-218ENST00000490504 MAP3K20Q9NYL2 800 aaKnown RBP17.77■□□□□ 0.44
PCCB-218ENST00000490504 PCDHA7Q9UN72 937 aa17.77■□□□□ 0.44
PCCB-218ENST00000490504 A0A1W2PQ27 194 aa17.76■□□□□ 0.43
PCCB-218ENST00000490504 A0A1W2PQ64 194 aa17.76■□□□□ 0.43
PCCB-218ENST00000490504 A0A1W2PQD8 194 aa17.76■□□□□ 0.43
PCCB-218ENST00000490504 GCOM1H8Y6P7 765 aaPredicted RBP17.76■□□□□ 0.43
PCCB-218ENST00000490504 TLR3O15455 904 aaKnown RBP17.76■□□□□ 0.43
PCCB-218ENST00000490504 EIF3JO75822 258 aaKnown RBP17.76■□□□□ 0.43
PCCB-218ENST00000490504 POLR2MP0CAP2 368 aa17.76■□□□□ 0.43
PCCB-218ENST00000490504 FPGSQ05932 587 aa17.76■□□□□ 0.43
PCCB-218ENST00000490504 TRAF1Q13077 416 aa17.76■□□□□ 0.43
PCCB-218ENST00000490504 ADALQ6DHV7 355 aa17.76■□□□□ 0.43
PCCB-218ENST00000490504 PDCD2LQ9BRP1 358 aa17.76■□□□□ 0.43
PCCB-218ENST00000490504 TRPV6Q9H1D0 765 aa17.76■□□□□ 0.43
PCCB-218ENST00000490504 DACT1Q9NYF0 836 aa17.76■□□□□ 0.43
PCCB-218ENST00000490504 LTBP2Q14767 1821 aa17.76■□□□□ 0.43
PCCB-218ENST00000490504 A6NJR5 290 aa17.76■□□□□ 0.43
PCCB-218ENST00000490504 PPP6R2O75170 966 aa17.76■□□□□ 0.43
PCCB-218ENST00000490504 NLRP5P59047 1200 aa17.76■□□□□ 0.43
PCCB-218ENST00000490504 NPY5RQ15761 445 aa17.76■□□□□ 0.43
PCCB-218ENST00000490504 GPR153Q6NV75 609 aa17.76■□□□□ 0.43
PCCB-218ENST00000490504 CCDC73Q6ZRK6 1079 aa17.76■□□□□ 0.43
PCCB-218ENST00000490504 FCHSD1Q86WN1 690 aa17.76■□□□□ 0.43
PCCB-218ENST00000490504 SAMD3Q8N6K7 520 aa17.76■□□□□ 0.43
PCCB-218ENST00000490504 IL31RAQ8NI17 732 aa17.76■□□□□ 0.43
PCCB-218ENST00000490504 MTG1Q9BT17 334 aaPredicted RBP17.76■□□□□ 0.43
PCCB-218ENST00000490504 PPP1R12CQ9BZL4 782 aa17.76■□□□□ 0.43
PCCB-218ENST00000490504 NUP62CLQ9H1M0 184 aa17.76■□□□□ 0.43
PCCB-218ENST00000490504 B4GALT4O60513 344 aa17.75■□□□□ 0.43
PCCB-218ENST00000490504 MYCLP12524 364 aaPredicted RBP17.75■□□□□ 0.43
PCCB-218ENST00000490504 PTPAQ15257 358 aa17.75■□□□□ 0.43
PCCB-218ENST00000490504 BRDTQ58F21 947 aaPredicted RBP17.75■□□□□ 0.43
PCCB-218ENST00000490504 MFSD5Q6N075 450 aa17.75■□□□□ 0.43
PCCB-218ENST00000490504 Q7L0L9 218 aa17.75■□□□□ 0.43
PCCB-218ENST00000490504 CCDC148Q8NFR7 591 aa17.75■□□□□ 0.43
PCCB-218ENST00000490504 PPP1R13LQ8WUF5 828 aa17.75■□□□□ 0.43
PCCB-218ENST00000490504 AFG1LQ8WV93 481 aa17.75■□□□□ 0.43
PCCB-218ENST00000490504 MRPS27Q92552 414 aaKnown RBP17.75■□□□□ 0.43
PCCB-218ENST00000490504 RRP36Q96EU6 259 aaKnown RBP17.75■□□□□ 0.43
PCCB-218ENST00000490504 DDX41Q9UJV9 622 aaKnown RBP17.75■□□□□ 0.43
PCCB-218ENST00000490504 LAMA2P24043 3122 aaKnown RBP17.74■□□□□ 0.43
PCCB-218ENST00000490504 NR1I2O75469 434 aa17.74■□□□□ 0.43
PCCB-218ENST00000490504 RGS20O76081 388 aa17.74■□□□□ 0.43
PCCB-218ENST00000490504 TOB1P50616 345 aaPredicted RBP17.74■□□□□ 0.43
PCCB-218ENST00000490504 ARHGAP1Q07960 439 aa17.74■□□□□ 0.43
PCCB-218ENST00000490504 PGM5Q15124 567 aa17.74■□□□□ 0.43
PCCB-218ENST00000490504 VSIG10LQ86VR7 867 aa17.74■□□□□ 0.43
PCCB-218ENST00000490504 FSIP1Q8NA03 581 aa17.74■□□□□ 0.43
PCCB-218ENST00000490504 GPKOWQ92917 476 aaPredicted RBP eCLIP17.74■□□□□ 0.431e-9■■■■□ 25.5
PCCB-218ENST00000490504 TNFRSF25Q93038 417 aa17.74■□□□□ 0.43
PCCB-218ENST00000490504 ZFP91Q96JP5 570 aaPredicted RBP17.74■□□□□ 0.43
PCCB-218ENST00000490504 SEZ6LQ9BYH1 1024 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms