RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 PCDHA2Q9Y5H9 948 aa17.86■□□□□ 0.45
SNX5-214ENST00000490175 PHF20L1A8MW92 1017 aa17.85■□□□□ 0.45
SNX5-214ENST00000490175 TAL1P17542 331 aaPredicted RBP17.85■□□□□ 0.45
SNX5-214ENST00000490175 TRIM21P19474 475 aaKnown RBP17.85■□□□□ 0.45
SNX5-214ENST00000490175 PTGER2P43116 358 aa17.85■□□□□ 0.45
SNX5-214ENST00000490175 FKBP3Q00688 224 aaKnown RBP17.85■□□□□ 0.45
SNX5-214ENST00000490175 RASA3Q14644 834 aa17.85■□□□□ 0.45
SNX5-214ENST00000490175 RABGAP1Q9Y3P9 1069 aa17.85■□□□□ 0.45
SNX5-214ENST00000490175 FANCGO15287 622 aa17.84■□□□□ 0.45
SNX5-214ENST00000490175 KIF5CO60282 957 aa17.84■□□□□ 0.45
SNX5-214ENST00000490175 ZBTB7AO95365 584 aa17.84■□□□□ 0.45
SNX5-214ENST00000490175 KRT18P05783 430 aaKnown RBP17.84■□□□□ 0.45
SNX5-214ENST00000490175 ZBED6P86452 979 aa17.84■□□□□ 0.45
SNX5-214ENST00000490175 ZYXQ15942 572 aaKnown RBP17.84■□□□□ 0.45
SNX5-214ENST00000490175 MEA1Q16626 185 aa17.84■□□□□ 0.45
SNX5-214ENST00000490175 CCDC84Q86UT8 332 aaPredicted RBP17.84■□□□□ 0.45
SNX5-214ENST00000490175 CCDC125Q86Z20 511 aa17.84■□□□□ 0.45
SNX5-214ENST00000490175 LPAR1Q92633 364 aa17.84■□□□□ 0.45
SNX5-214ENST00000490175 EEF2KMTQ96G04 330 aa17.84■□□□□ 0.45
SNX5-214ENST00000490175 CEP63Q96MT8 703 aa17.84■□□□□ 0.45
SNX5-214ENST00000490175 UIMC1Q96RL1 719 aa17.84■□□□□ 0.45
SNX5-214ENST00000490175 WDR24Q96S15 920 aa17.84■□□□□ 0.45
SNX5-214ENST00000490175 NDST4Q9H3R1 872 aa17.84■□□□□ 0.45
SNX5-214ENST00000490175 NFKBIEO00221 500 aa17.84■□□□□ 0.45
SNX5-214ENST00000490175 URI1O94763 535 aaPredicted RBP17.84■□□□□ 0.45
SNX5-214ENST00000490175 LRRC41Q15345 812 aa17.84■□□□□ 0.45
SNX5-214ENST00000490175 ARSHQ5FYA8 562 aa17.84■□□□□ 0.45
SNX5-214ENST00000490175 HERC4Q5GLZ8 1057 aaPredicted RBP17.84■□□□□ 0.45
SNX5-214ENST00000490175 LDHDQ86WU2 507 aa17.84■□□□□ 0.45
SNX5-214ENST00000490175 ZNF397Q8NF99 534 aaPredicted RBP17.84■□□□□ 0.45
SNX5-214ENST00000490175 TEPSINQ96N21 525 aa17.84■□□□□ 0.45
SNX5-214ENST00000490175 ZNHIT6Q9NWK9 470 aaKnown RBP17.84■□□□□ 0.45
SNX5-214ENST00000490175 LTBP3Q9NS15 1303 aa17.84■□□□□ 0.45
SNX5-214ENST00000490175 SPDYE4A6NLX3 237 aa17.83■□□□□ 0.45
SNX5-214ENST00000490175 WDR46O15213 610 aaKnown RBP17.83■□□□□ 0.45
SNX5-214ENST00000490175 GNA14O95837 355 aa17.83■□□□□ 0.45
SNX5-214ENST00000490175 ICAM1P05362 532 aa17.83■□□□□ 0.45
SNX5-214ENST00000490175 PPP4R3CPQ6ZMV5 832 aa17.83■□□□□ 0.45
SNX5-214ENST00000490175 CYP2W1Q8TAV3 490 aa17.83■□□□□ 0.45
SNX5-214ENST00000490175 SLC5A5Q92911 643 aa17.83■□□□□ 0.45
SNX5-214ENST00000490175 ZNF341Q9BYN7 854 aa17.83■□□□□ 0.45
SNX5-214ENST00000490175 GLIS2Q9BZE0 524 aaPredicted RBP17.83■□□□□ 0.45
SNX5-214ENST00000490175 TUFT1Q9NNX1 390 aa17.83■□□□□ 0.45
SNX5-214ENST00000490175 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.83■□□□□ 0.45
SNX5-214ENST00000490175 MYO1AQ9UBC5 1043 aa17.83■□□□□ 0.45
SNX5-214ENST00000490175 EPN1Q9Y6I3 576 aaPredicted RBP17.83■□□□□ 0.45
SNX5-214ENST00000490175 RASSF10A6NK89 507 aa17.82■□□□□ 0.44
SNX5-214ENST00000490175 NDUFA10O95299 355 aa17.82■□□□□ 0.44
SNX5-214ENST00000490175 MUTP22033 750 aa17.82■□□□□ 0.44
SNX5-214ENST00000490175 CDK17Q00537 523 aa17.82■□□□□ 0.44
SNX5-214ENST00000490175 SETQ01105 290 aaPredicted RBP17.82■□□□□ 0.44
SNX5-214ENST00000490175 PPP2R5CQ13362 524 aa17.82■□□□□ 0.44
SNX5-214ENST00000490175 ARHGAP29Q52LW3 1261 aa17.82■□□□□ 0.44
SNX5-214ENST00000490175 GLIS3Q8NEA6 775 aa17.82■□□□□ 0.44
SNX5-214ENST00000490175 TBC1D5Q92609 795 aa17.82■□□□□ 0.44
SNX5-214ENST00000490175 PCMTD1Q96MG8 357 aaPredicted RBP17.82■□□□□ 0.44
SNX5-214ENST00000490175 EIF2AK1Q9BQI3 630 aaKnown RBP17.82■□□□□ 0.44
SNX5-214ENST00000490175 KIAA1683Q9H0B3 1180 aa17.82■□□□□ 0.44
SNX5-214ENST00000490175 LZTFL1Q9NQ48 299 aa17.82■□□□□ 0.44
SNX5-214ENST00000490175 CTNND1O60716 968 aaKnown RBP17.82■□□□□ 0.44
SNX5-214ENST00000490175 PSMD10O75832 226 aa17.82■□□□□ 0.44
SNX5-214ENST00000490175 EYA4O95677 639 aa17.82■□□□□ 0.44
SNX5-214ENST00000490175 MAP3K9P80192 1104 aa17.82■□□□□ 0.44
SNX5-214ENST00000490175 GIT2Q14161 759 aa17.82■□□□□ 0.44
SNX5-214ENST00000490175 CEP55Q53EZ4 464 aa17.82■□□□□ 0.44
SNX5-214ENST00000490175 OTOP1Q7RTM1 612 aa17.82■□□□□ 0.44
SNX5-214ENST00000490175 PRPF38AQ8NAV1 312 aaKnown RBP17.82■□□□□ 0.44
SNX5-214ENST00000490175 ACRBPQ8NEB7 543 aa17.82■□□□□ 0.44
SNX5-214ENST00000490175 CHP1Q99653 195 aa17.82■□□□□ 0.44
SNX5-214ENST00000490175 WDR18Q9BV38 432 aa17.82■□□□□ 0.44
SNX5-214ENST00000490175 EMILIN3Q9NT22 766 aa17.82■□□□□ 0.44
SNX5-214ENST00000490175 FBXO28Q9NVF7 368 aa17.82■□□□□ 0.44
SNX5-214ENST00000490175 COL4A3BPQ9Y5P4 624 aa17.82■□□□□ 0.44
SNX5-214ENST00000490175 NPHP3-ACAD11A0A0J9YXS1 232 aa17.81■□□□□ 0.44
SNX5-214ENST00000490175 SHTN1A0MZ66 631 aa17.81■□□□□ 0.44
SNX5-214ENST00000490175 HSD17B4P51659 736 aa17.81■□□□□ 0.44
SNX5-214ENST00000490175 MARSP56192 900 aaKnown RBP17.81■□□□□ 0.44
SNX5-214ENST00000490175 PSMC6P62333 389 aa17.81■□□□□ 0.44
SNX5-214ENST00000490175 EDRF1Q3B7T1 1238 aa17.81■□□□□ 0.44
SNX5-214ENST00000490175 LRCH2Q5VUJ6 765 aa17.81■□□□□ 0.44
SNX5-214ENST00000490175 WDR59Q6PJI9 974 aa17.81■□□□□ 0.44
SNX5-214ENST00000490175 ZC3H3Q8IXZ2 948 aaKnown RBP17.81■□□□□ 0.44
SNX5-214ENST00000490175 CCDC170Q8IYT3 715 aa17.81■□□□□ 0.44
SNX5-214ENST00000490175 SCFD1Q8WVM8 642 aa17.81■□□□□ 0.44
SNX5-214ENST00000490175 HSD17B14Q9BPX1 270 aa17.81■□□□□ 0.44
SNX5-214ENST00000490175 SIK3Q9Y2K2 1263 aa17.81■□□□□ 0.44
SNX5-214ENST00000490175 TRAF5O00463 557 aa17.81■□□□□ 0.44
SNX5-214ENST00000490175 GHRHRQ02643 423 aa17.81■□□□□ 0.44
SNX5-214ENST00000490175 PABPC4Q13310 644 aaKnown RBP eCLIP17.81■□□□□ 0.448e-12■■■■■ 27.5
SNX5-214ENST00000490175 TUBB2AQ13885 445 aa17.81■□□□□ 0.44
SNX5-214ENST00000490175 NAA30Q147X3 362 aaPredicted RBP17.81■□□□□ 0.44
SNX5-214ENST00000490175 ARHGAP27Q6ZUM4 889 aa17.81■□□□□ 0.44
SNX5-214ENST00000490175 MNS1Q8NEH6 495 aa17.81■□□□□ 0.44
SNX5-214ENST00000490175 SLF1Q9BQI6 1058 aa17.81■□□□□ 0.44
SNX5-214ENST00000490175 TUBB2BQ9BVA1 445 aa17.81■□□□□ 0.44
SNX5-214ENST00000490175 WDR11Q9BZH6 1224 aa17.81■□□□□ 0.44
SNX5-214ENST00000490175 EDEM3Q9BZQ6 932 aa17.81■□□□□ 0.44
SNX5-214ENST00000490175 KCTD10Q9H3F6 313 aa17.81■□□□□ 0.44
SNX5-214ENST00000490175 AGPAT5Q9NUQ2 364 aa17.81■□□□□ 0.44
SNX5-214ENST00000490175 PNMA2Q9UL42 364 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms