RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 FAM182BQ5T319 152 aa17.71■□□□□ 0.43
MCF2L-229ENST00000488765 PIK3AP1Q6ZUJ8 805 aa17.71■□□□□ 0.43
MCF2L-229ENST00000488765 ZNF579Q8NAF0 562 aaKnown RBP17.71■□□□□ 0.43
MCF2L-229ENST00000488765 WHAMMQ8TF30 809 aa17.71■□□□□ 0.43
MCF2L-229ENST00000488765 STXBP3O00186 592 aa17.7■□□□□ 0.42
MCF2L-229ENST00000488765 AHCYL1O43865 530 aa17.7■□□□□ 0.42
MCF2L-229ENST00000488765 STAT6P42226 847 aa17.7■□□□□ 0.42
MCF2L-229ENST00000488765 TMEM62Q0P6H9 643 aa17.7■□□□□ 0.42
MCF2L-229ENST00000488765 LDHAL6AQ6ZMR3 332 aa17.7■□□□□ 0.42
MCF2L-229ENST00000488765 UCMAQ8WVF2 138 aa17.7■□□□□ 0.42
MCF2L-229ENST00000488765 PLCB1Q9NQ66 1216 aa17.7■□□□□ 0.42
MCF2L-229ENST00000488765 RGL1Q9NZL6 768 aa17.7■□□□□ 0.42
MCF2L-229ENST00000488765 TACC3Q9Y6A5 838 aa17.7■□□□□ 0.42
MCF2L-229ENST00000488765 A6NHS1 94 aa17.7■□□□□ 0.42
MCF2L-229ENST00000488765 SRGNP10124 158 aa17.7■□□□□ 0.42
MCF2L-229ENST00000488765 RARAP10276 462 aa17.7■□□□□ 0.42
MCF2L-229ENST00000488765 KLRC1P26715 233 aa17.7■□□□□ 0.42
MCF2L-229ENST00000488765 RUFY4Q6ZNE9 571 aa17.7■□□□□ 0.42
MCF2L-229ENST00000488765 BICDL1Q6ZP65 573 aa17.7■□□□□ 0.42
MCF2L-229ENST00000488765 DYDC1Q8WWB3 177 aa17.7■□□□□ 0.42
MCF2L-229ENST00000488765 PCMTD2Q9NV79 361 aa17.7■□□□□ 0.42
MCF2L-229ENST00000488765 SLC12A4Q9UP95 1085 aa17.7■□□□□ 0.42
MCF2L-229ENST00000488765 ZBTB1Q9Y2K1 713 aa17.7■□□□□ 0.42
MCF2L-229ENST00000488765 VEGFAP15692 232 aaPredicted RBP17.7■□□□□ 0.42
MCF2L-229ENST00000488765 HSPA9P38646 679 aaKnown RBP17.7■□□□□ 0.42
MCF2L-229ENST00000488765 RAD23BP54727 409 aa17.7■□□□□ 0.42
MCF2L-229ENST00000488765 PDCD2Q16342 344 aaPredicted RBP17.7■□□□□ 0.42
MCF2L-229ENST00000488765 IL17AQ16552 155 aa17.7■□□□□ 0.42
MCF2L-229ENST00000488765 ANKRD40Q6AI12 368 aa17.7■□□□□ 0.42
MCF2L-229ENST00000488765 CRELD2Q6UXH1 353 aaPredicted RBP17.7■□□□□ 0.42
MCF2L-229ENST00000488765 CD302Q8IX05 232 aa17.7■□□□□ 0.42
MCF2L-229ENST00000488765 CCDC24Q8N4L8 307 aa17.7■□□□□ 0.42
MCF2L-229ENST00000488765 FOXP1Q9H334 677 aaPredicted RBP17.7■□□□□ 0.42
MCF2L-229ENST00000488765 CPDO75976 1380 aa17.7■□□□□ 0.42
MCF2L-229ENST00000488765 H7C1W4 665 aa17.69■□□□□ 0.42
MCF2L-229ENST00000488765 FCER1AP12319 257 aa17.69■□□□□ 0.42
MCF2L-229ENST00000488765 MSH2P43246 934 aa17.69■□□□□ 0.42
MCF2L-229ENST00000488765 CACNA2D4Q7Z3S7 1137 aa17.69■□□□□ 0.42
MCF2L-229ENST00000488765 SPATA21Q7Z572 469 aa17.69■□□□□ 0.42
MCF2L-229ENST00000488765 FGFR1OP2Q9NVK5 253 aa17.69■□□□□ 0.42
MCF2L-229ENST00000488765 SART1O43290 800 aaKnown RBP17.69■□□□□ 0.42
MCF2L-229ENST00000488765 METTL24Q5JXM2 366 aa17.69■□□□□ 0.42
MCF2L-229ENST00000488765 ARHGAP22Q7Z5H3 698 aa17.69■□□□□ 0.42
MCF2L-229ENST00000488765 TBC1D5Q92609 795 aa17.69■□□□□ 0.42
MCF2L-229ENST00000488765 APPBP2Q92624 585 aa17.69■□□□□ 0.42
MCF2L-229ENST00000488765 TTYH3Q9C0H2 523 aa17.69■□□□□ 0.42
MCF2L-229ENST00000488765 INTS9Q9NV88 658 aaKnown RBP17.69■□□□□ 0.42
MCF2L-229ENST00000488765 MTMR7Q9Y216 660 aa17.69■□□□□ 0.42
MCF2L-229ENST00000488765 OVOS2A0A0G2JMS6 1433 aa17.69■□□□□ 0.42
MCF2L-229ENST00000488765 TTI1O43156 1089 aa17.68■□□□□ 0.42
MCF2L-229ENST00000488765 FERP16591 822 aa17.68■□□□□ 0.42
MCF2L-229ENST00000488765 ECHS1P30084 290 aa17.68■□□□□ 0.42
MCF2L-229ENST00000488765 ROR2Q01974 943 aaKnown RBP17.68■□□□□ 0.42
MCF2L-229ENST00000488765 ADAM9Q13443 819 aa17.68■□□□□ 0.42
MCF2L-229ENST00000488765 ZNF268Q14587 947 aaPredicted RBP17.68■□□□□ 0.42
MCF2L-229ENST00000488765 CRACR2BQ8N4Y2 399 aaPredicted RBP17.68■□□□□ 0.42
MCF2L-229ENST00000488765 PAIP2Q9BPZ3 127 aaKnown RBP17.68■□□□□ 0.42
MCF2L-229ENST00000488765 TRIM51Q9BSJ1 452 aa17.68■□□□□ 0.42
MCF2L-229ENST00000488765 LNPEPQ9UIQ6 1025 aa17.68■□□□□ 0.42
MCF2L-229ENST00000488765 DBR1Q9UK59 544 aaKnown RBP17.68■□□□□ 0.42
MCF2L-229ENST00000488765 PRKAB2O43741 272 aa17.68■□□□□ 0.42
MCF2L-229ENST00000488765 STARD3NLO95772 234 aa17.68■□□□□ 0.42
MCF2L-229ENST00000488765 CCND1P24385 295 aa17.68■□□□□ 0.42
MCF2L-229ENST00000488765 ATP11AP98196 1134 aa17.68■□□□□ 0.42
MCF2L-229ENST00000488765 IFIT5Q13325 482 aaKnown RBP17.68■□□□□ 0.42
MCF2L-229ENST00000488765 LRRC23Q53EV4 343 aaPredicted RBP17.68■□□□□ 0.42
MCF2L-229ENST00000488765 ERMARDQ5T6L9 678 aa17.68■□□□□ 0.42
MCF2L-229ENST00000488765 ELOA2Q8IYF1 753 aaPredicted RBP17.68■□□□□ 0.42
MCF2L-229ENST00000488765 GDAP1Q8TB36 358 aa17.68■□□□□ 0.42
MCF2L-229ENST00000488765 TMEM237Q96Q45 408 aa17.68■□□□□ 0.42
MCF2L-229ENST00000488765 DDX50Q9BQ39 737 aaKnown RBP17.68■□□□□ 0.42
MCF2L-229ENST00000488765 UTYO14607 1347 aa17.68■□□□□ 0.42
MCF2L-229ENST00000488765 C5orf60A6NFR6 353 aa17.68■□□□□ 0.42
MCF2L-229ENST00000488765 KIAA0825Q8IV33 1275 aa17.68■□□□□ 0.42
MCF2L-229ENST00000488765 ADSSL1Q8N142 457 aa17.68■□□□□ 0.42
MCF2L-229ENST00000488765 ANKRD42Q8N9B4 389 aa17.68■□□□□ 0.42
MCF2L-229ENST00000488765 RASGRP4Q8TDF6 673 aa17.68■□□□□ 0.42
MCF2L-229ENST00000488765 AZI2Q9H6S1 392 aa17.68■□□□□ 0.42
MCF2L-229ENST00000488765 IFNAR1P17181 557 aa17.67■□□□□ 0.42
MCF2L-229ENST00000488765 PRPF4BQ13523 1007 aaKnown RBP17.67■□□□□ 0.42
MCF2L-229ENST00000488765 TTC38Q5R3I4 469 aa17.67■□□□□ 0.42
MCF2L-229ENST00000488765 FBXL16Q8N461 479 aa17.67■□□□□ 0.42
MCF2L-229ENST00000488765 ADAMTS1Q9UHI8 967 aa17.67■□□□□ 0.42
MCF2L-229ENST00000488765 USH1CQ9Y6N9 552 aa17.67■□□□□ 0.42
MCF2L-229ENST00000488765 PDS5AQ29RF7 1337 aaKnown RBP17.67■□□□□ 0.42
MCF2L-229ENST00000488765 ERVV-2B6SEH9 535 aa17.67■□□□□ 0.42
MCF2L-229ENST00000488765 EYA2O00167 538 aa17.67■□□□□ 0.42
MCF2L-229ENST00000488765 HIP1RO75146 1068 aa17.67■□□□□ 0.42
MCF2L-229ENST00000488765 KIAA0753Q2KHM9 967 aa17.67■□□□□ 0.42
MCF2L-229ENST00000488765 PDXDC2PQ6P474 469 aa17.67■□□□□ 0.42
MCF2L-229ENST00000488765 METTL5Q9NRN9 209 aaKnown RBP17.67■□□□□ 0.42
MCF2L-229ENST00000488765 PSMA7O14818 248 aa17.66■□□□□ 0.42
MCF2L-229ENST00000488765 GHRP10912 638 aa17.66■□□□□ 0.42
MCF2L-229ENST00000488765 EMC10Q5UCC4 262 aa17.66■□□□□ 0.42
MCF2L-229ENST00000488765 ZNF317Q96PQ6 595 aaPredicted RBP17.66■□□□□ 0.42
MCF2L-229ENST00000488765 GORASP1Q9BQQ3 440 aa17.66■□□□□ 0.42
MCF2L-229ENST00000488765 FAM129AQ9BZQ8 928 aa17.66■□□□□ 0.42
MCF2L-229ENST00000488765 GREM2Q9H772 168 aa17.66■□□□□ 0.42
MCF2L-229ENST00000488765 BSDC1Q9NW68 430 aaPredicted RBP17.66■□□□□ 0.42
MCF2L-229ENST00000488765 CHCHD3Q9NX63 227 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms