RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 STRIP2Q9ULQ0 834 aa7.03□□□□□ -1.28
BRCA1-217ENST00000487825 IFT172Q9UG01 1749 aa7.03□□□□□ -1.28
BRCA1-217ENST00000487825 HFM1A2PYH4 1435 aa7.02□□□□□ -1.29
BRCA1-217ENST00000487825 TNS3Q68CZ2 1445 aa7.02□□□□□ -1.29
BRCA1-217ENST00000487825 KIF1BO60333 1816 aa7.02□□□□□ -1.29
BRCA1-217ENST00000487825 AURKAO14965 403 aa7.02□□□□□ -1.29
BRCA1-217ENST00000487825 N4BP3O15049 544 aa7.02□□□□□ -1.29
BRCA1-217ENST00000487825 L1CAMP32004 1257 aa7.02□□□□□ -1.29
BRCA1-217ENST00000487825 AMPD2Q01433 879 aa7.02□□□□□ -1.29
BRCA1-217ENST00000487825 TMEM62Q0P6H9 643 aa7.02□□□□□ -1.29
BRCA1-217ENST00000487825 ZNF385BQ569K4 471 aa7.02□□□□□ -1.29
BRCA1-217ENST00000487825 BICRALQ6AI39 1079 aa7.02□□□□□ -1.29
BRCA1-217ENST00000487825 ARHGEF39Q8N4T4 335 aa7.02□□□□□ -1.29
BRCA1-217ENST00000487825 CAPN10Q9HC96 672 aa7.02□□□□□ -1.29
BRCA1-217ENST00000487825 PDLIM7Q9NR12 457 aa7.02□□□□□ -1.29
BRCA1-217ENST00000487825 APEX2Q9UBZ4 518 aa7.02□□□□□ -1.29
BRCA1-217ENST00000487825 RRBP1Q9P2E9 1410 aaKnown RBP7.01□□□□□ -1.29
BRCA1-217ENST00000487825 PCNTO95613 3336 aa7.01□□□□□ -1.29
BRCA1-217ENST00000487825 ALS2Q96Q42 1657 aa7.01□□□□□ -1.29
BRCA1-217ENST00000487825 ANKRD30AQ9BXX3 1397 aa7.01□□□□□ -1.29
BRCA1-217ENST00000487825 ANKRD34BA5PLL1 514 aa7.01□□□□□ -1.29
BRCA1-217ENST00000487825 RFXAPO00287 272 aa7.01□□□□□ -1.29
BRCA1-217ENST00000487825 SEPHS1P49903 392 aa7.01□□□□□ -1.29
BRCA1-217ENST00000487825 NCKAP1LP55160 1127 aa7.01□□□□□ -1.29
BRCA1-217ENST00000487825 CBX2Q14781 532 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-217ENST00000487825 LCE4AQ5TA78 99 aa7.01□□□□□ -1.29
BRCA1-217ENST00000487825 EEF1DP3Q658K8 133 aa7.01□□□□□ -1.29
BRCA1-217ENST00000487825 RCSD1Q6JBY9 416 aa7.01□□□□□ -1.29
BRCA1-217ENST00000487825 LDHDQ86WU2 507 aa7.01□□□□□ -1.29
BRCA1-217ENST00000487825 MZB1Q8WU39 189 aa7.01□□□□□ -1.29
BRCA1-217ENST00000487825 RCC1LQ96I51 464 aaKnown RBP7.01□□□□□ -1.29
BRCA1-217ENST00000487825 SYT17Q9BSW7 474 aa7.01□□□□□ -1.29
BRCA1-217ENST00000487825 AKT3Q9Y243 479 aa7.01□□□□□ -1.29
BRCA1-217ENST00000487825 HCFC2Q9Y5Z7 792 aa7.01□□□□□ -1.29
BRCA1-217ENST00000487825 KNDC1Q76NI1 1749 aa7.01□□□□□ -1.29
BRCA1-217ENST00000487825 TRPM3Q9HCF6 1732 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-217ENST00000487825 MAP3K5Q99683 1374 aa7□□□□□ -1.29
BRCA1-217ENST00000487825 C2orf71A6NGG8 1288 aa7□□□□□ -1.29
BRCA1-217ENST00000487825 SMAD7O15105 426 aaKnown RBP7□□□□□ -1.29
BRCA1-217ENST00000487825 KCNH1O95259 989 aa7□□□□□ -1.29
BRCA1-217ENST00000487825 TCF3P15923 654 aa7□□□□□ -1.29
BRCA1-217ENST00000487825 HSPA6P17066 643 aa7□□□□□ -1.29
BRCA1-217ENST00000487825 PLEKHN1Q494U1 663 aaPredicted RBP7□□□□□ -1.29
BRCA1-217ENST00000487825 VPS37DQ86XT2 251 aa7□□□□□ -1.29
BRCA1-217ENST00000487825 PPP1R14AQ96A00 147 aa7□□□□□ -1.29
BRCA1-217ENST00000487825 BACE2Q9Y5Z0 518 aa7□□□□□ -1.29
BRCA1-217ENST00000487825 COL24A1Q17RW2 1714 aa7□□□□□ -1.29
BRCA1-217ENST00000487825 PEAK1Q9H792 1746 aa7□□□□□ -1.29
BRCA1-217ENST00000487825 PARP4Q9UKK3 1724 aaKnown RBP7□□□□□ -1.29
BRCA1-217ENST00000487825 SPATA31A5Q5VU36 1347 aa7□□□□□ -1.29
BRCA1-217ENST00000487825 SPATA31A7Q8IWB4 1347 aa7□□□□□ -1.29
BRCA1-217ENST00000487825 SSBP05455 408 aaKnown RBP eCLIP6.99□□□□□ -1.29
BRCA1-217ENST00000487825 DBHP09172 617 aa6.99□□□□□ -1.29
BRCA1-217ENST00000487825 MAPKAPK2P49137 400 aa6.99□□□□□ -1.29
BRCA1-217ENST00000487825 ZNF200P98182 395 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-217ENST00000487825 NR1I3Q14994 352 aa6.99□□□□□ -1.29
BRCA1-217ENST00000487825 ZC3H14Q6PJT7 736 aaKnown RBP6.99□□□□□ -1.29
BRCA1-217ENST00000487825 CPNE8Q86YQ8 564 aa6.99□□□□□ -1.29
BRCA1-217ENST00000487825 IGDCC3Q8IVU1 814 aa6.99□□□□□ -1.29
BRCA1-217ENST00000487825 ZNF513Q8N8E2 541 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-217ENST00000487825 APBA2Q99767 749 aa6.99□□□□□ -1.29
BRCA1-217ENST00000487825 LGR4Q9BXB1 951 aa6.99□□□□□ -1.29
BRCA1-217ENST00000487825 RXFP1Q9HBX9 757 aa6.99□□□□□ -1.29
BRCA1-217ENST00000487825 FAM83GA6ND36 823 aa6.98□□□□□ -1.29
BRCA1-217ENST00000487825 F8W031 263 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-217ENST00000487825 CYBBP04839 570 aa6.98□□□□□ -1.29
BRCA1-217ENST00000487825 PRELPP51888 382 aa6.98□□□□□ -1.29
BRCA1-217ENST00000487825 GRB10Q13322 594 aa6.98□□□□□ -1.29
BRCA1-217ENST00000487825 TCERG1LQ5VWI1 586 aa6.98□□□□□ -1.29
BRCA1-217ENST00000487825 LARP1BQ659C4 914 aaKnown RBP6.98□□□□□ -1.29
BRCA1-217ENST00000487825 PAQR3Q6TCH7 311 aa6.98□□□□□ -1.29
BRCA1-217ENST00000487825 EPB41L4AQ9HCS5 686 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-217ENST00000487825 DBR1Q9UK59 544 aaKnown RBP6.98□□□□□ -1.29
BRCA1-217ENST00000487825 RWDD3Q9Y3V2 267 aa6.98□□□□□ -1.29
BRCA1-217ENST00000487825 WDR90Q96KV7 1748 aa6.98□□□□□ -1.29
BRCA1-217ENST00000487825 PPLO60437 1756 aa6.97□□□□□ -1.29
BRCA1-217ENST00000487825 NPHP3-ACAD11A0A0J9YXS1 232 aa6.97□□□□□ -1.29
BRCA1-217ENST00000487825 ZC3H12DA2A288 527 aaKnown RBP6.97□□□□□ -1.29
BRCA1-217ENST00000487825 BMP7P18075 431 aa6.97□□□□□ -1.29
BRCA1-217ENST00000487825 CORO7P57737 925 aa6.97□□□□□ -1.29
BRCA1-217ENST00000487825 NAIPQ13075 1403 aa6.97□□□□□ -1.29
BRCA1-217ENST00000487825 NCAPHQ15003 741 aa6.97□□□□□ -1.29
BRCA1-217ENST00000487825 C6orf15Q6UXA7 325 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-217ENST00000487825 TMEFF1Q8IYR6 380 aa6.97□□□□□ -1.29
BRCA1-217ENST00000487825 BVESQ8NE79 360 aa6.97□□□□□ -1.29
BRCA1-217ENST00000487825 NLGN2Q8NFZ4 835 aa6.97□□□□□ -1.29
BRCA1-217ENST00000487825 PDGFDQ9GZP0 370 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-217ENST00000487825 BTG4Q9NY30 223 aa6.97□□□□□ -1.29
BRCA1-217ENST00000487825 ANKRD50Q9ULJ7 1429 aa6.97□□□□□ -1.29
BRCA1-217ENST00000487825 PLA2G2DQ9UNK4 145 aa6.97□□□□□ -1.29
BRCA1-217ENST00000487825 EMC9Q9Y3B6 208 aa6.97□□□□□ -1.29
BRCA1-217ENST00000487825 PCDHA5Q9Y5H7 936 aa6.97□□□□□ -1.29
BRCA1-217ENST00000487825 CLTCL1P53675 1640 aa6.97□□□□□ -1.29
BRCA1-217ENST00000487825 TOPAZ1Q8N9V7 1692 aa6.96□□□□□ -1.29
BRCA1-217ENST00000487825 SBNO1A3KN83 1393 aa6.96□□□□□ -1.29
BRCA1-217ENST00000487825 ARHGEF10O15013 1369 aa6.96□□□□□ -1.29
BRCA1-217ENST00000487825 QSER1Q2KHR3 1735 aa6.96□□□□□ -1.29
BRCA1-217ENST00000487825 AKAP12Q02952 1782 aa6.96□□□□□ -1.3
BRCA1-217ENST00000487825 NOP56O00567 594 aaKnown RBP6.96□□□□□ -1.3
BRCA1-217ENST00000487825 IRS4O14654 1257 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms