RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 TBC1D8O95759 1140 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 LTFP02788 710 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 ASGR2P07307 311 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 SLC3A2P08195 630 aaKnown RBP3.91□□□□□ -1.78
FXN-204ENST00000484259 PARP1P09874 1014 aaKnown RBP3.91□□□□□ -1.78
FXN-204ENST00000484259 RHOXF2BP0C7M4 288 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 HARSP12081 509 aaKnown RBP3.91□□□□□ -1.78
FXN-204ENST00000484259 HSPA6P17066 643 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 ATP5F1P24539 256 aaPredicted RBP3.91□□□□□ -1.78
FXN-204ENST00000484259 TMOD1P28289 359 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 ATP5DP30049 168 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 POLR2BP30876 1174 aaKnown RBP3.91□□□□□ -1.78
FXN-204ENST00000484259 INPP5BP32019 993 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 AP2B1P63010 937 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 TNFAIP2Q03169 654 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 DNM1Q05193 864 aaKnown RBP3.91□□□□□ -1.78
FXN-204ENST00000484259 NSUN2Q08J23 767 aaKnown RBP eCLIP3.91□□□□□ -1.78
FXN-204ENST00000484259 IKQ13123 557 aaPredicted RBP3.91□□□□□ -1.78
FXN-204ENST00000484259 IFIT5Q13325 482 aaKnown RBP3.91□□□□□ -1.78
FXN-204ENST00000484259 TAF12Q16514 161 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 ASIC2Q16515 512 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 MEA1Q16626 185 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 C11orf91Q3C1V1 193 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 MSS51Q4VC12 460 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 CCDC30Q5VVM6 783 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 GPR139Q6DWJ6 353 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 PRPF40BQ6NWY9 871 aaKnown RBP3.91□□□□□ -1.78
FXN-204ENST00000484259 MRPL14Q6P1L8 145 aaKnown RBP3.91□□□□□ -1.78
FXN-204ENST00000484259 LYPD8Q6UX82 237 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 CCDC81Q6ZN84 652 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 ARHGEF18Q6ZSZ5 1173 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 EP400NLQ6ZTU2 488 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 LRRC47Q8N1G4 583 aaKnown RBP3.91□□□□□ -1.78
FXN-204ENST00000484259 ZNF280CQ8ND82 737 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 TTC16Q8NEE8 873 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 PPP1R14CQ8TAE6 165 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 SCG3Q8WXD2 468 aaKnown RBP3.91□□□□□ -1.78
FXN-204ENST00000484259 CHFRQ96EP1 664 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 CDCA5Q96FF9 252 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 FUBP3Q96I24 572 aaKnown RBP eCLIP3.91□□□□□ -1.78
FXN-204ENST00000484259 C1orf74Q96LT6 269 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 CCDC43Q96MW1 224 aaKnown RBP3.91□□□□□ -1.78
FXN-204ENST00000484259 NUP88Q99567 741 aaPredicted RBP3.91□□□□□ -1.78
FXN-204ENST00000484259 RHOXF2Q9BQY4 288 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 SDF4Q9BRK5 362 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 DESI2Q9BSY9 194 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 ALG1Q9BT22 464 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 MMTAG2Q9BU76 263 aaKnown RBP3.91□□□□□ -1.78
FXN-204ENST00000484259 SLC12A5Q9H2X9 1139 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 KCTD10Q9H3F6 313 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 IFT22Q9H7X7 185 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 XAB2Q9HCS7 855 aaKnown RBP3.91□□□□□ -1.78
FXN-204ENST00000484259 OSGEPQ9NPF4 335 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 ANLNQ9NQW6 1124 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 PDLIM7Q9NR12 457 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 ZNF277Q9NRM2 450 aaPredicted RBP3.91□□□□□ -1.78
FXN-204ENST00000484259 DONSONQ9NYP3 566 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 CEP72Q9P209 647 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 FNIP2Q9P278 1114 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 SLC13A4Q9UKG4 626 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 PPT2Q9UMR5 302 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 C19orf53Q9UNZ5 99 aaPredicted RBP3.91□□□□□ -1.78
FXN-204ENST00000484259 COG5Q9UP83 839 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 JAG2Q9Y219 1238 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 CFAP65Q6ZU64 1925 aaKnown RBP3.91□□□□□ -1.78
FXN-204ENST00000484259 RNF123Q5XPI4 1314 aa3.91□□□□□ -1.78
FXN-204ENST00000484259 ATAD2Q6PL18 1390 aa3.9□□□□□ -1.78
FXN-204ENST00000484259 ROBO2Q9HCK4 1378 aa3.9□□□□□ -1.78
FXN-204ENST00000484259 A0A087X0M5 115 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 A0A1B0GX30 115 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 H3BRJ5 948 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 MCF2LO15068 1137 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 MAN1A2O60476 641 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 ADAMTS4O75173 837 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 PALMO75781 387 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 DDHD2O94830 711 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 ARHGEF15O94989 841 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 PYGMP11217 842 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 POU3F2P20265 443 aaPredicted RBP3.9□□□□□ -1.79
FXN-204ENST00000484259 ATP4AP20648 1035 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 MCM4P33991 863 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 HNF4AP41235 474 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 MCM2P49736 904 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 SEPHS1P49903 392 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 USP14P54578 494 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 TMPRSS15P98073 1019 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 PDE4BQ07343 736 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 CCDC173Q0VFZ6 552 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 FAPQ12884 760 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 PPP1R7Q15435 360 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 CNGA3Q16281 694 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 VWA3BQ502W6 1294 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 KRTCAP3Q53RY4 240 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 SPDYCQ5MJ68 293 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 COX20Q5RI15 118 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 FAM205BPQ63HN1 556 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 SLC6A19Q695T7 634 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 ALKBH5Q6P6C2 394 aaKnown RBP3.9□□□□□ -1.79
FXN-204ENST00000484259 C11orf88Q6PI97 169 aa3.9□□□□□ -1.79
FXN-204ENST00000484259 GBP6Q6ZN66 633 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms