RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 PTPN11Q06124 597 aaPredicted RBP5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 WASHC5Q12768 1159 aa5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 PRKG1Q13976 671 aa5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 DCTN1Q14203 1278 aa5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 PLCB4Q15147 1175 aa5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 SKOR2Q2VWA4 1001 aaPredicted RBP5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 ZMYM1Q5SVZ6 1142 aa5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 LILRA6Q6PI73 481 aa5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 DHX32Q7L7V1 743 aaKnown RBP5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 GPR155Q7Z3F1 870 aa5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 TBC1D1Q86TI0 1168 aaPredicted RBP5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 GRAMD1CQ8IYS0 662 aa5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 MICALL1Q8N3F8 863 aa5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 IGSF22Q8N9C0 903 aa5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 FAM13CQ8NE31 585 aa5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 CHTF18Q8WVB6 975 aa5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 SECISBP2LQ93073 1101 aaKnown RBP5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 TBC1D20Q96BZ9 403 aa5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 MRGPRX3Q96LB0 322 aa5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 ACAP3Q96P50 834 aa5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 RMDN3Q96TC7 470 aa5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 TSEN34Q9BSV6 310 aaKnown RBP5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 ALG1Q9BT22 464 aa5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 TRIT1Q9H3H1 467 aaKnown RBP5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 PRKRIP1Q9H875 184 aaPredicted RBP5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 JMJD4Q9H9V9 463 aa5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 POLMQ9NP87 494 aaPredicted RBP5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 PDLIM7Q9NR12 457 aa5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 SMYD2Q9NRG4 433 aa5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 SPTLC3Q9NUV7 552 aa5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 CACNA2D2Q9NY47 1150 aa5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 APEX2Q9UBZ4 518 aa5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 TMX2Q9Y320 296 aa5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 NOC2LQ9Y3T9 749 aaKnown RBP5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 PCDHA9Q9Y5H5 950 aa5.94□□□□□ -1.46
R3HDM1-216ENST00000483065 A0A087WV62 115 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 LOC102724428A0A0B4J2F2 783 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 GTPBP10A4D1E9 387 aaKnown RBP5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 SKAP2O75563 359 aaPredicted RBP5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 TRPA1O75762 1119 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 ZIC2O95409 532 aaPredicted RBP5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 CSTBP04080 98 aaKnown RBP5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 SNRPB2P08579 225 aaKnown RBP5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 POU2F2P09086 479 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 PARP1P09874 1014 aaKnown RBP5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 FAM157BP0CG42 384 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 ADD2P35612 726 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 STT3AP46977 705 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 ATXN1P54253 815 aaKnown RBP5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 GFRA1P56159 465 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 SIK1P57059 783 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 SCAND1P57086 179 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 ZNF267Q14586 743 aaPredicted RBP5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 LBRQ14739 615 aaKnown RBP5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 LLGL1Q15334 1064 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 ANO4Q32M45 955 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 CFAP58Q5T655 872 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 COL13A1Q5TAT6 717 aaPredicted RBP5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 ADAMTSL4Q6UY14 1074 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 USP53Q70EK8 1073 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 GALNT5Q7Z7M9 940 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 NBPF11Q86T75 865 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 MAP4K3Q8IVH8 894 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 SYTL1Q8IYJ3 562 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 LSMEM1Q8N8F7 131 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 ZNF527Q8NB42 609 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 PCYOX1LQ8NBM8 494 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 STK35Q8TDR2 534 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 TMEM41AQ96HV5 264 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 GMCL1Q96IK5 515 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 FGD4Q96M96 766 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 NSUN5Q96P11 429 aaKnown RBP5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 CELF4Q9BZC1 486 aaKnown RBP5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 BTBD1Q9H0C5 482 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 CCDC68Q9H2F9 335 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 WASH6PQ9NQA3 447 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 FAM86C1Q9NVL1 165 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 GPRC5BQ9NZH0 403 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 PPP1R9AQ9ULJ8 1098 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 PCDHGB6Q9Y5F9 930 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 CLSPNQ9HAW4 1339 aa5.93□□□□□ -1.46
R3HDM1-216ENST00000483065 SOBPA7XYQ1 873 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 SMTNL1A8MU46 457 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 FAM155AB1AL88 458 aaPredicted RBP5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 B4DLN1 442 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 PCDHGA12O60330 932 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 GFPT2O94808 682 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 SCG5P05408 212 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 YBX3P16989 372 aaKnown RBP eCLIP5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 TNFSF4P23510 183 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 TSPAN7P41732 249 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 GPR85P60893 370 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 ETF1P62495 437 aaKnown RBP5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 PHC1P78364 1004 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 ZBED6P86452 979 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 STARD3Q14849 445 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 POLD3Q15054 466 aaPredicted RBP5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 ZNF174Q15697 407 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 ZNF423Q2M1K9 1284 aa5.92□□□□□ -1.46
R3HDM1-216ENST00000483065 TUBB8Q3ZCM7 444 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms