RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 KCNA2P16389 499 aa14.97□□□□□ -0.01
HDAC1-208ENST00000482310 CYP3A7P24462 503 aa14.97□□□□□ -0.01
HDAC1-208ENST00000482310 ICAM3P32942 547 aa14.97□□□□□ -0.01
HDAC1-208ENST00000482310 TRAPPC10P48553 1259 aa14.97□□□□□ -0.01
HDAC1-208ENST00000482310 BEX3Q00994 111 aa14.97□□□□□ -0.01
HDAC1-208ENST00000482310 DNM1Q05193 864 aaKnown RBP14.97□□□□□ -0.01
HDAC1-208ENST00000482310 SF3A1Q15459 793 aaKnown RBP14.97□□□□□ -0.01
HDAC1-208ENST00000482310 DUSP28Q4G0W2 176 aa14.97□□□□□ -0.01
HDAC1-208ENST00000482310 TPRNQ4KMQ1 711 aa14.97□□□□□ -0.01
HDAC1-208ENST00000482310 LRCH2Q5VUJ6 765 aa14.97□□□□□ -0.01
HDAC1-208ENST00000482310 PPP4R3AQ6IN85 833 aa14.97□□□□□ -0.01
HDAC1-208ENST00000482310 CCDC62Q6P9F0 684 aa14.97□□□□□ -0.01
HDAC1-208ENST00000482310 MOXD1Q6UVY6 613 aa14.97□□□□□ -0.01
HDAC1-208ENST00000482310 NIPA1Q7RTP0 329 aa14.97□□□□□ -0.01
HDAC1-208ENST00000482310 ARMC5Q96C12 935 aa14.97□□□□□ -0.01
HDAC1-208ENST00000482310 CDHR1Q96JP9 859 aa14.97□□□□□ -0.01
HDAC1-208ENST00000482310 USP28Q96RU2 1077 aa14.97□□□□□ -0.01
HDAC1-208ENST00000482310 SDF4Q9BRK5 362 aa14.97□□□□□ -0.01
HDAC1-208ENST00000482310 TCEAL9Q9UHQ7 104 aa14.97□□□□□ -0.01
HDAC1-208ENST00000482310 DNAH12Q6ZR08 3092 aa14.97□□□□□ -0.01
HDAC1-208ENST00000482310 MYADML2A6NDP7 307 aa14.96□□□□□ -0.01
HDAC1-208ENST00000482310 GAS7O60861 476 aa14.96□□□□□ -0.01
HDAC1-208ENST00000482310 GH1P01241 217 aa14.96□□□□□ -0.01
HDAC1-208ENST00000482310 OR52Z1P0C646 297 aa14.96□□□□□ -0.01
HDAC1-208ENST00000482310 C6orf222P0C671 652 aaPredicted RBP14.96□□□□□ -0.01
HDAC1-208ENST00000482310 PDIA4P13667 645 aaKnown RBP14.96□□□□□ -0.01
HDAC1-208ENST00000482310 TXKP42681 527 aa14.96□□□□□ -0.01
HDAC1-208ENST00000482310 ARHGAP1Q07960 439 aa14.96□□□□□ -0.01
HDAC1-208ENST00000482310 PTGDRQ13258 359 aa14.96□□□□□ -0.01
HDAC1-208ENST00000482310 KCNV1Q6PIU1 500 aa14.96□□□□□ -0.01
HDAC1-208ENST00000482310 ETNPPLQ8TBG4 499 aa14.96□□□□□ -0.01
HDAC1-208ENST00000482310 SPATA33Q96N06 139 aa14.96□□□□□ -0.01
HDAC1-208ENST00000482310 MBOAT7Q96N66 472 aa14.96□□□□□ -0.01
HDAC1-208ENST00000482310 ZNF396Q96N95 335 aaPredicted RBP14.96□□□□□ -0.01
HDAC1-208ENST00000482310 AP5M1Q9H0R1 490 aa14.96□□□□□ -0.01
HDAC1-208ENST00000482310 XPNPEP3Q9NQH7 507 aa14.96□□□□□ -0.01
HDAC1-208ENST00000482310 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.96□□□□□ -0.01
HDAC1-208ENST00000482310 CHMP5Q9NZZ3 219 aa14.96□□□□□ -0.01
HDAC1-208ENST00000482310 TRIP12Q14669 1992 aaPredicted RBP14.96□□□□□ -0.01
HDAC1-208ENST00000482310 ARID2Q68CP9 1835 aa14.95□□□□□ -0.02
HDAC1-208ENST00000482310 NOP56O00567 594 aaKnown RBP14.95□□□□□ -0.02
HDAC1-208ENST00000482310 DUSP11O75319 330 aaKnown RBP14.95□□□□□ -0.02
HDAC1-208ENST00000482310 FARP2O94887 1054 aaPredicted RBP14.95□□□□□ -0.02
HDAC1-208ENST00000482310 BAG4O95429 457 aaKnown RBP14.95□□□□□ -0.02
HDAC1-208ENST00000482310 CHMP4BP1P59074 171 aa14.95□□□□□ -0.02
HDAC1-208ENST00000482310 NEDD9Q14511 834 aa14.95□□□□□ -0.02
HDAC1-208ENST00000482310 CELF3Q5SZQ8 465 aaKnown RBP14.95□□□□□ -0.02
HDAC1-208ENST00000482310 NCAPH2Q6IBW4 605 aa14.95□□□□□ -0.02
HDAC1-208ENST00000482310 AFG1LQ8WV93 481 aa14.95□□□□□ -0.02
HDAC1-208ENST00000482310 HAS1Q92839 578 aa14.95□□□□□ -0.02
HDAC1-208ENST00000482310 TEKT3Q9BXF9 490 aa14.95□□□□□ -0.02
HDAC1-208ENST00000482310 JPH1Q9HDC5 661 aaPredicted RBP14.95□□□□□ -0.02
HDAC1-208ENST00000482310 KCNMB3Q9NPA1 279 aa14.95□□□□□ -0.02
HDAC1-208ENST00000482310 PAK6Q9NQU5 681 aaPredicted RBP14.95□□□□□ -0.02
HDAC1-208ENST00000482310 SLC9A2Q9UBY0 812 aa14.95□□□□□ -0.02
HDAC1-208ENST00000482310 CIZ1Q9ULV3 898 aaPredicted RBP14.95□□□□□ -0.02
HDAC1-208ENST00000482310 GNEQ9Y223 722 aaKnown RBP14.95□□□□□ -0.02
HDAC1-208ENST00000482310 SAMM50Q9Y512 469 aa14.95□□□□□ -0.02
HDAC1-208ENST00000482310 NKRFO15226 690 aaKnown RBP eCLIP14.94□□□□□ -0.02
HDAC1-208ENST00000482310 MYL3P08590 195 aa14.94□□□□□ -0.02
HDAC1-208ENST00000482310 TGFB3P10600 412 aa14.94□□□□□ -0.02
HDAC1-208ENST00000482310 MARCKSP29966 332 aaPredicted RBP14.94□□□□□ -0.02
HDAC1-208ENST00000482310 STK38Q15208 465 aa14.94□□□□□ -0.02
HDAC1-208ENST00000482310 UTP14CQ5TAP6 766 aaKnown RBP14.94□□□□□ -0.02
HDAC1-208ENST00000482310 SLC5A5Q92911 643 aa14.94□□□□□ -0.02
HDAC1-208ENST00000482310 TMEM106CQ9BVX2 250 aa14.94□□□□□ -0.02
HDAC1-208ENST00000482310 UNC45AQ9H3U1 944 aa14.94□□□□□ -0.02
HDAC1-208ENST00000482310 POTEMA6NI47 508 aa14.93□□□□□ -0.02
HDAC1-208ENST00000482310 MAFGO15525 162 aa14.93□□□□□ -0.02
HDAC1-208ENST00000482310 MSCO60682 206 aa14.93□□□□□ -0.02
HDAC1-208ENST00000482310 CCNE2O96020 404 aa14.93□□□□□ -0.02
HDAC1-208ENST00000482310 TFRCP02786 760 aaKnown RBP14.93□□□□□ -0.02
HDAC1-208ENST00000482310 ZNF286BP0CG31 522 aa14.93□□□□□ -0.02
HDAC1-208ENST00000482310 TECP42680 631 aa14.93□□□□□ -0.02
HDAC1-208ENST00000482310 FSCN1Q16658 493 aaKnown RBP14.93□□□□□ -0.02
HDAC1-208ENST00000482310 HSDL1Q3SXM5 330 aa14.93□□□□□ -0.02
HDAC1-208ENST00000482310 LHX8Q68G74 356 aa14.93□□□□□ -0.02
HDAC1-208ENST00000482310 METTL7BQ6UX53 244 aa14.93□□□□□ -0.02
HDAC1-208ENST00000482310 SLFN12Q8IYM2 578 aa14.93□□□□□ -0.02
HDAC1-208ENST00000482310 GIMAP8Q8ND71 665 aaPredicted RBP14.93□□□□□ -0.02
HDAC1-208ENST00000482310 PPP1R13LQ8WUF5 828 aa14.93□□□□□ -0.02
HDAC1-208ENST00000482310 SENP7Q9BQF6 1050 aa14.93□□□□□ -0.02
HDAC1-208ENST00000482310 TTC12Q9H892 705 aaPredicted RBP14.93□□□□□ -0.02
HDAC1-208ENST00000482310 SPC25Q9HBM1 224 aa14.93□□□□□ -0.02
HDAC1-208ENST00000482310 CEP131Q9UPN4 1083 aa14.93□□□□□ -0.02
HDAC1-208ENST00000482310 NFASCO94856 1347 aa14.92□□□□□ -0.02
HDAC1-208ENST00000482310 VWA3AA6NCI4 1184 aa14.92□□□□□ -0.02
HDAC1-208ENST00000482310 DHX15O43143 795 aaKnown RBP14.92□□□□□ -0.02
HDAC1-208ENST00000482310 PSMD10O75832 226 aa14.92□□□□□ -0.02
HDAC1-208ENST00000482310 MMP3P08254 477 aa14.92□□□□□ -0.02
HDAC1-208ENST00000482310 ACTR2P61160 394 aa14.92□□□□□ -0.02
HDAC1-208ENST00000482310 LAMC2Q13753 1193 aa14.92□□□□□ -0.02
HDAC1-208ENST00000482310 GNASQ5JWF2 1037 aa14.92□□□□□ -0.02
HDAC1-208ENST00000482310 TRMT1LQ7Z2T5 733 aaKnown RBP14.92□□□□□ -0.02
HDAC1-208ENST00000482310 MIER3Q7Z3K6 550 aa14.92□□□□□ -0.02
HDAC1-208ENST00000482310 C4orf32Q8N8J7 132 aa14.92□□□□□ -0.02
HDAC1-208ENST00000482310 U2AF1L4Q8WU68 220 aaKnown RBP14.92□□□□□ -0.02
HDAC1-208ENST00000482310 FAM20AQ96MK3 541 aa14.92□□□□□ -0.02
HDAC1-208ENST00000482310 MTMR9Q96QG7 549 aa14.92□□□□□ -0.02
HDAC1-208ENST00000482310 GDPD2Q9HCC8 539 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms