RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 GDF6Q6KF10 455 aaPredicted RBP12.07□□□□□ -0.48
SMURF1-204ENST00000480055 GJD3Q8N144 294 aa12.07□□□□□ -0.48
SMURF1-204ENST00000480055 C7orf31Q8N865 590 aa12.07□□□□□ -0.48
SMURF1-204ENST00000480055 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.07□□□□□ -0.48
SMURF1-204ENST00000480055 NSUN6Q8TEA1 469 aaKnown RBP12.07□□□□□ -0.48
SMURF1-204ENST00000480055 ESR2Q92731 530 aa12.07□□□□□ -0.48
SMURF1-204ENST00000480055 RILPL2Q969X0 211 aa12.07□□□□□ -0.48
SMURF1-204ENST00000480055 CRBNQ96SW2 442 aa12.07□□□□□ -0.48
SMURF1-204ENST00000480055 RAD9AQ99638 391 aa12.07□□□□□ -0.48
SMURF1-204ENST00000480055 CPVLQ9H3G5 476 aa12.07□□□□□ -0.48
SMURF1-204ENST00000480055 RNF41Q9H4P4 317 aaPredicted RBP12.07□□□□□ -0.48
SMURF1-204ENST00000480055 MTUS1Q9ULD2 1270 aa12.07□□□□□ -0.48
SMURF1-204ENST00000480055 ABHD14A-ACY1A0A1B0GW23 586 aa12.06□□□□□ -0.48
SMURF1-204ENST00000480055 ZNF213O14771 459 aa12.06□□□□□ -0.48
SMURF1-204ENST00000480055 NBNO60934 754 aa12.06□□□□□ -0.48
SMURF1-204ENST00000480055 EFCAB14O75071 495 aa12.06□□□□□ -0.48
SMURF1-204ENST00000480055 MMP3P08254 477 aa12.06□□□□□ -0.48
SMURF1-204ENST00000480055 IL9P15248 144 aa12.06□□□□□ -0.48
SMURF1-204ENST00000480055 KCNA5P22460 613 aa12.06□□□□□ -0.48
SMURF1-204ENST00000480055 FECHP22830 423 aa12.06□□□□□ -0.48
SMURF1-204ENST00000480055 PDE1AP54750 535 aa12.06□□□□□ -0.48
SMURF1-204ENST00000480055 MFAP1P55081 439 aaKnown RBP12.06□□□□□ -0.48
SMURF1-204ENST00000480055 CDC37Q16543 378 aaPredicted RBP12.06□□□□□ -0.48
SMURF1-204ENST00000480055 ARHGEF16Q5VV41 709 aa12.06□□□□□ -0.48
SMURF1-204ENST00000480055 MCF2L2Q86YR7 1114 aa12.06□□□□□ -0.48
SMURF1-204ENST00000480055 RGS22Q8NE09 1264 aa12.06□□□□□ -0.48
SMURF1-204ENST00000480055 KAT2BQ92831 832 aa12.06□□□□□ -0.48
SMURF1-204ENST00000480055 TAAR1Q96RJ0 339 aa12.06□□□□□ -0.48
SMURF1-204ENST00000480055 ALG1Q9BT22 464 aa12.06□□□□□ -0.48
SMURF1-204ENST00000480055 KAT14Q9H8E8 782 aa12.06□□□□□ -0.48
SMURF1-204ENST00000480055 VAT1LQ9HCJ6 419 aa12.06□□□□□ -0.48
SMURF1-204ENST00000480055 ABCB11O95342 1321 aa12.06□□□□□ -0.48
SMURF1-204ENST00000480055 KMT2EQ8IZD2 1858 aa12.06□□□□□ -0.48
SMURF1-204ENST00000480055 ZMYND10O75800 440 aa12.05□□□□□ -0.48
SMURF1-204ENST00000480055 SNHG28P0DPA3 235 aa12.05□□□□□ -0.48
SMURF1-204ENST00000480055 PCP11498 1178 aaKnown RBP12.05□□□□□ -0.48
SMURF1-204ENST00000480055 CKBP12277 381 aa12.05□□□□□ -0.48
SMURF1-204ENST00000480055 ALADP13716 330 aa12.05□□□□□ -0.48
SMURF1-204ENST00000480055 ARHGAP1Q07960 439 aa12.05□□□□□ -0.48
SMURF1-204ENST00000480055 DGKDQ16760 1214 aa12.05□□□□□ -0.48
SMURF1-204ENST00000480055 PTCRAQ6ISU1 281 aaPredicted RBP12.05□□□□□ -0.48
SMURF1-204ENST00000480055 FAM117BQ6P1L5 589 aa12.05□□□□□ -0.48
SMURF1-204ENST00000480055 CCDC62Q6P9F0 684 aa12.05□□□□□ -0.48
SMURF1-204ENST00000480055 ZNF589Q86UQ0 364 aaPredicted RBP12.05□□□□□ -0.48
SMURF1-204ENST00000480055 IQCA1Q86XH1 822 aa12.05□□□□□ -0.48
SMURF1-204ENST00000480055 TBC1D10CQ8IV04 446 aa12.05□□□□□ -0.48
SMURF1-204ENST00000480055 TBC1D5Q92609 795 aa12.05□□□□□ -0.48
SMURF1-204ENST00000480055 RMDN3Q96TC7 470 aa12.05□□□□□ -0.48
SMURF1-204ENST00000480055 GTF2IRD1Q9UHL9 959 aa12.05□□□□□ -0.48
SMURF1-204ENST00000480055 MRVI1Q9Y6F6 885 aa12.05□□□□□ -0.48
SMURF1-204ENST00000480055 CCDC171Q6TFL3 1326 aa12.05□□□□□ -0.48
SMURF1-204ENST00000480055 SALL3Q9BXA9 1300 aa12.05□□□□□ -0.48
SMURF1-204ENST00000480055 WDFY4Q6ZS81 3184 aa12.05□□□□□ -0.48
SMURF1-204ENST00000480055 LOXHD1Q8IVV2 1947 aa12.04□□□□□ -0.48
SMURF1-204ENST00000480055 TECTAO75443 2155 aa12.04□□□□□ -0.48
SMURF1-204ENST00000480055 EIF2AK2P19525 551 aaKnown RBP12.04□□□□□ -0.48
SMURF1-204ENST00000480055 SSTR3P32745 418 aaPredicted RBP12.04□□□□□ -0.48
SMURF1-204ENST00000480055 MRE11P49959 708 aa12.04□□□□□ -0.48
SMURF1-204ENST00000480055 IKBKEQ14164 716 aa12.04□□□□□ -0.48
SMURF1-204ENST00000480055 PUS10Q3MIT2 529 aaKnown RBP12.04□□□□□ -0.48
SMURF1-204ENST00000480055 CCDC178Q5BJE1 867 aa12.04□□□□□ -0.48
SMURF1-204ENST00000480055 TRAF7Q6Q0C0 670 aa12.04□□□□□ -0.48
SMURF1-204ENST00000480055 DGKHQ86XP1 1220 aa12.04□□□□□ -0.48
SMURF1-204ENST00000480055 ADGRF4Q8IZF3 695 aa12.04□□□□□ -0.48
SMURF1-204ENST00000480055 PNMA1Q8ND90 353 aa12.04□□□□□ -0.48
SMURF1-204ENST00000480055 NEK9Q8TD19 979 aa12.04□□□□□ -0.48
SMURF1-204ENST00000480055 SYTL5Q8TDW5 730 aaPredicted RBP12.04□□□□□ -0.48
SMURF1-204ENST00000480055 TATDN2Q93075 761 aa12.04□□□□□ -0.48
SMURF1-204ENST00000480055 IWS1Q96ST2 819 aa12.04□□□□□ -0.48
SMURF1-204ENST00000480055 KATNAL1Q9BW62 490 aa12.04□□□□□ -0.48
SMURF1-204ENST00000480055 HDAC6Q9UBN7 1215 aa12.04□□□□□ -0.48
SMURF1-204ENST00000480055 MRPL11Q9Y3B7 192 aaKnown RBP12.04□□□□□ -0.48
SMURF1-204ENST00000480055 ZMYM6O95789 1325 aa12.04□□□□□ -0.48
SMURF1-204ENST00000480055 NEDD4P46934 1319 aa12.04□□□□□ -0.48
SMURF1-204ENST00000480055 C5orf42Q9H799 3197 aa12.03□□□□□ -0.48
SMURF1-204ENST00000480055 GOLGA8CPA6NN73 597 aa12.03□□□□□ -0.48
SMURF1-204ENST00000480055 SORBS3O60504 671 aa12.03□□□□□ -0.48
SMURF1-204ENST00000480055 KDM4AO75164 1064 aa12.03□□□□□ -0.48
SMURF1-204ENST00000480055 EIF3JO75822 258 aaKnown RBP12.03□□□□□ -0.48
SMURF1-204ENST00000480055 CFBP00751 764 aa12.03□□□□□ -0.48
SMURF1-204ENST00000480055 PARP1P09874 1014 aaKnown RBP12.03□□□□□ -0.48
SMURF1-204ENST00000480055 ZNF286BP0CG31 522 aa12.03□□□□□ -0.48
SMURF1-204ENST00000480055 MYCLP12524 364 aaPredicted RBP12.03□□□□□ -0.48
SMURF1-204ENST00000480055 HTRA4P83105 476 aaPredicted RBP12.03□□□□□ -0.48
SMURF1-204ENST00000480055 NHLH1Q02575 133 aa12.03□□□□□ -0.48
SMURF1-204ENST00000480055 PTK7Q13308 1070 aa12.03□□□□□ -0.48
SMURF1-204ENST00000480055 LAMC2Q13753 1193 aa12.03□□□□□ -0.48
SMURF1-204ENST00000480055 MBTPS1Q14703 1052 aa12.03□□□□□ -0.48
SMURF1-204ENST00000480055 TRIM71Q2Q1W2 868 aaKnown RBP12.03□□□□□ -0.48
SMURF1-204ENST00000480055 TPRNQ4KMQ1 711 aa12.03□□□□□ -0.48
SMURF1-204ENST00000480055 NUDT18Q6ZVK8 323 aa12.03□□□□□ -0.48
SMURF1-204ENST00000480055 FBXO11Q86XK2 927 aa12.03□□□□□ -0.48
SMURF1-204ENST00000480055 DHX37Q8IY37 1157 aaKnown RBP12.03□□□□□ -0.48
SMURF1-204ENST00000480055 TTC13Q8NBP0 860 aa12.03□□□□□ -0.48
SMURF1-204ENST00000480055 MRPL38Q96DV4 380 aaKnown RBP12.03□□□□□ -0.48
SMURF1-204ENST00000480055 C17orf80Q9BSJ5 609 aa12.03□□□□□ -0.48
SMURF1-204ENST00000480055 MAF1Q9H063 256 aa12.03□□□□□ -0.48
SMURF1-204ENST00000480055 KCNH6Q9H252 994 aa12.03□□□□□ -0.48
SMURF1-204ENST00000480055 COL20A1Q9P218 1284 aa12.03□□□□□ -0.48
SMURF1-204ENST00000480055 DDX41Q9UJV9 622 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms