RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 TEPPQ6URK8 271 aa6.08□□□□□ -1.44
CDC42BPA-212ENST00000478573 NOP9Q86U38 636 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-212ENST00000478573 TMEM168Q9H0V1 697 aa6.08□□□□□ -1.44
CDC42BPA-212ENST00000478573 R3HCC1Q9Y3T6 440 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-212ENST00000478573 LAMTOR5O43504 91 aa6.07□□□□□ -1.44
CDC42BPA-212ENST00000478573 B4GALT3O60512 393 aa6.07□□□□□ -1.44
CDC42BPA-212ENST00000478573 IL13P35225 146 aa6.07□□□□□ -1.44
CDC42BPA-212ENST00000478573 MLLT6P55198 1093 aaPredicted RBP6.07□□□□□ -1.44
CDC42BPA-212ENST00000478573 PPP2R2AP63151 447 aa6.07□□□□□ -1.44
CDC42BPA-212ENST00000478573 SLC10A6Q3KNW5 377 aa6.07□□□□□ -1.44
CDC42BPA-212ENST00000478573 CCDC144BQ3MJ40 725 aa6.07□□□□□ -1.44
CDC42BPA-212ENST00000478573 EMC4Q5J8M3 183 aa6.07□□□□□ -1.44
CDC42BPA-212ENST00000478573 PLEKHH3Q7Z736 793 aa6.07□□□□□ -1.44
CDC42BPA-212ENST00000478573 TTC9BQ8N6N2 239 aa6.07□□□□□ -1.44
CDC42BPA-212ENST00000478573 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.07□□□□□ -1.44
CDC42BPA-212ENST00000478573 JAM3Q9BX67 310 aa6.07□□□□□ -1.44
CDC42BPA-212ENST00000478573 KRTAP3-1Q9BYR8 98 aa6.07□□□□□ -1.44
CDC42BPA-212ENST00000478573 OSBPL2Q9H1P3 480 aa6.07□□□□□ -1.44
CDC42BPA-212ENST00000478573 JADE2Q9NQC1 790 aa6.07□□□□□ -1.44
CDC42BPA-212ENST00000478573 ST7Q9NRC1 585 aa6.07□□□□□ -1.44
CDC42BPA-212ENST00000478573 RBPJLQ9UBG7 517 aa6.07□□□□□ -1.44
CDC42BPA-212ENST00000478573 FTSJ1Q9UET6 329 aa6.07□□□□□ -1.44
CDC42BPA-212ENST00000478573 C9orf118A6NHY6 69 aa6.06□□□□□ -1.44
CDC42BPA-212ENST00000478573 KRIT1O00522 736 aa6.06□□□□□ -1.44
CDC42BPA-212ENST00000478573 MATN3O15232 486 aa6.06□□□□□ -1.44
CDC42BPA-212ENST00000478573 MAFKO60675 156 aa6.06□□□□□ -1.44
CDC42BPA-212ENST00000478573 TADA3O75528 432 aa6.06□□□□□ -1.44
CDC42BPA-212ENST00000478573 CYP7B1O75881 506 aa6.06□□□□□ -1.44
CDC42BPA-212ENST00000478573 LRG1P02750 347 aa6.06□□□□□ -1.44
CDC42BPA-212ENST00000478573 TNFRSF1AP19438 455 aa6.06□□□□□ -1.44
CDC42BPA-212ENST00000478573 ZXDAP98168 799 aa6.06□□□□□ -1.44
CDC42BPA-212ENST00000478573 RAB33AQ14088 237 aa6.06□□□□□ -1.44
CDC42BPA-212ENST00000478573 SURF1Q15526 300 aa6.06□□□□□ -1.44
CDC42BPA-212ENST00000478573 SLC35F1Q5T1Q4 408 aa6.06□□□□□ -1.44
CDC42BPA-212ENST00000478573 PHF19Q5T6S3 580 aa6.06□□□□□ -1.44
CDC42BPA-212ENST00000478573 TRMT10BQ6PF06 316 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-212ENST00000478573 ANKS3Q6ZW76 656 aa6.06□□□□□ -1.44
CDC42BPA-212ENST00000478573 USP53Q70EK8 1073 aa6.06□□□□□ -1.44
CDC42BPA-212ENST00000478573 PMFBP1Q8TBY8 1022 aa6.06□□□□□ -1.44
CDC42BPA-212ENST00000478573 KCTD13Q8WZ19 329 aa6.06□□□□□ -1.44
CDC42BPA-212ENST00000478573 MKL1Q969V6 931 aa6.06□□□□□ -1.44
CDC42BPA-212ENST00000478573 C1orf159Q96HA4 380 aa6.06□□□□□ -1.44
CDC42BPA-212ENST00000478573 YTHDC1Q96MU7 727 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-212ENST00000478573 TMEM209Q96SK2 561 aa6.06□□□□□ -1.44
CDC42BPA-212ENST00000478573 IER2Q9BTL4 223 aa6.06□□□□□ -1.44
CDC42BPA-212ENST00000478573 ZDHHC9Q9Y397 364 aa6.06□□□□□ -1.44
CDC42BPA-212ENST00000478573 NPEPPSL1A6NEC2 478 aa6.05□□□□□ -1.44
CDC42BPA-212ENST00000478573 SLC27A2O14975 620 aa6.05□□□□□ -1.44
CDC42BPA-212ENST00000478573 GRIN1Q05586 938 aa6.05□□□□□ -1.44
CDC42BPA-212ENST00000478573 TESK1Q15569 626 aa6.05□□□□□ -1.44
CDC42BPA-212ENST00000478573 PIP4K2CQ8TBX8 421 aa6.05□□□□□ -1.44
CDC42BPA-212ENST00000478573 HNRNPLLQ8WVV9 542 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-212ENST00000478573 ZCCHC14Q8WYQ9 949 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-212ENST00000478573 WRNIP1Q96S55 665 aa6.05□□□□□ -1.44
CDC42BPA-212ENST00000478573 PHF20Q9BVI0 1012 aa6.05□□□□□ -1.44
CDC42BPA-212ENST00000478573 SSBP3Q9BWW4 388 aaPredicted RBP6.05□□□□□ -1.44
CDC42BPA-212ENST00000478573 SMOC1Q9H4F8 434 aa6.05□□□□□ -1.44
CDC42BPA-212ENST00000478573 SIRPGQ9P1W8 387 aa6.05□□□□□ -1.44
CDC42BPA-212ENST00000478573 PPARGC1AQ9UBK2 798 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-212ENST00000478573 DCAF1Q9Y4B6 1507 aa6.04□□□□□ -1.44
CDC42BPA-212ENST00000478573 A0A1W2PQU0 124 aa6.04□□□□□ -1.44
CDC42BPA-212ENST00000478573 MAP4K2Q12851 820 aa6.04□□□□□ -1.44
CDC42BPA-212ENST00000478573 NFE2L2Q16236 605 aa6.04□□□□□ -1.44
CDC42BPA-212ENST00000478573 ARHGEF18Q6ZSZ5 1173 aa6.04□□□□□ -1.44
CDC42BPA-212ENST00000478573 LRP10Q7Z4F1 713 aa6.04□□□□□ -1.44
CDC42BPA-212ENST00000478573 KBTBD2Q8IY47 623 aa6.04□□□□□ -1.44
CDC42BPA-212ENST00000478573 PHOSPHO1Q8TCT1 267 aa6.04□□□□□ -1.44
CDC42BPA-212ENST00000478573 IGDCC4Q8TDY8 1250 aa6.04□□□□□ -1.44
CDC42BPA-212ENST00000478573 DVL3Q92997 716 aaPredicted RBP6.04□□□□□ -1.44
CDC42BPA-212ENST00000478573 KISS1RQ969F8 398 aaPredicted RBP6.04□□□□□ -1.44
CDC42BPA-212ENST00000478573 EPN3Q9H201 632 aa6.04□□□□□ -1.44
CDC42BPA-212ENST00000478573 ZSWIM4Q9H7M6 989 aa6.04□□□□□ -1.44
CDC42BPA-212ENST00000478573 PPP4R1LQ9P1A2 415 aa6.04□□□□□ -1.44
CDC42BPA-212ENST00000478573 ASH2LQ9UBL3 628 aa6.04□□□□□ -1.44
CDC42BPA-212ENST00000478573 WASF3Q9UPY6 502 aa6.04□□□□□ -1.44
CDC42BPA-212ENST00000478573 ZCCHC6Q5VYS8 1495 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-212ENST00000478573 B4GALT4O60513 344 aa6.03□□□□□ -1.44
CDC42BPA-212ENST00000478573 MSCO60682 206 aa6.03□□□□□ -1.44
CDC42BPA-212ENST00000478573 ICAM4Q14773 271 aa6.03□□□□□ -1.44
CDC42BPA-212ENST00000478573 VASNQ6EMK4 673 aa6.03□□□□□ -1.44
CDC42BPA-212ENST00000478573 GIMAP6Q6P9H5 292 aa6.03□□□□□ -1.44
CDC42BPA-212ENST00000478573 RBM12BQ8IXT5 1001 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-212ENST00000478573 SH3RF3Q8TEJ3 882 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-212ENST00000478573 C1QTNF3Q9BXJ4 246 aa6.03□□□□□ -1.44
CDC42BPA-212ENST00000478573 TRIM55Q9BYV6 548 aa6.03□□□□□ -1.44
CDC42BPA-212ENST00000478573 PIF1Q9H611 641 aa6.03□□□□□ -1.44
CDC42BPA-212ENST00000478573 BARX1Q9HBU1 254 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-212ENST00000478573 NPFFR2Q9Y5X5 522 aa6.03□□□□□ -1.44
CDC42BPA-212ENST00000478573 DLX3O60479 287 aa6.02□□□□□ -1.45
CDC42BPA-212ENST00000478573 FSHBP01225 129 aa6.02□□□□□ -1.45
CDC42BPA-212ENST00000478573 NFATC3Q12968 1075 aa6.02□□□□□ -1.45
CDC42BPA-212ENST00000478573 ZNF585AQ6P3V2 769 aa6.02□□□□□ -1.45
CDC42BPA-212ENST00000478573 CIR1Q86X95 450 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-212ENST00000478573 TRIM48Q8IWZ4 208 aa6.02□□□□□ -1.45
CDC42BPA-212ENST00000478573 PALM2Q8IXS6 379 aa6.02□□□□□ -1.45
CDC42BPA-212ENST00000478573 CELF2-AS1Q8N7Q2 184 aa6.02□□□□□ -1.45
CDC42BPA-212ENST00000478573 MBD6Q96DN6 1003 aa6.02□□□□□ -1.45
CDC42BPA-212ENST00000478573 KCNJ15Q99712 375 aa6.02□□□□□ -1.45
CDC42BPA-212ENST00000478573 DEF6Q9H4E7 631 aa6.02□□□□□ -1.45
CDC42BPA-212ENST00000478573 SLC6A20Q9NP91 592 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms