RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 SRLQ86TD4 932 aa6.62□□□□□ -1.35
TRA2B-211ENST00000477939 C10orf67Q8IYJ2 551 aa6.62□□□□□ -1.35
TRA2B-211ENST00000477939 CHCHD4Q8N4Q1 142 aa6.62□□□□□ -1.35
TRA2B-211ENST00000477939 ARRDC4Q8NCT1 418 aa6.62□□□□□ -1.35
TRA2B-211ENST00000477939 GOLGA5Q8TBA6 731 aa6.62□□□□□ -1.35
TRA2B-211ENST00000477939 ENOX1Q8TC92 643 aaKnown RBP6.62□□□□□ -1.35
TRA2B-211ENST00000477939 APPBP2Q92624 585 aa6.62□□□□□ -1.35
TRA2B-211ENST00000477939 NAP1L3Q99457 506 aaPredicted RBP6.62□□□□□ -1.35
TRA2B-211ENST00000477939 MMP19Q99542 508 aa6.62□□□□□ -1.35
TRA2B-211ENST00000477939 SLKQ9H2G2 1235 aaPredicted RBP6.62□□□□□ -1.35
TRA2B-211ENST00000477939 DCTPP1Q9H773 170 aa6.62□□□□□ -1.35
TRA2B-211ENST00000477939 LUC7LQ9NQ29 371 aaKnown RBP6.62□□□□□ -1.35
TRA2B-211ENST00000477939 PDLIM7Q9NR12 457 aa6.62□□□□□ -1.35
TRA2B-211ENST00000477939 MTMR10Q9NXD2 777 aa6.62□□□□□ -1.35
TRA2B-211ENST00000477939 SLC5A4Q9NY91 659 aa6.62□□□□□ -1.35
TRA2B-211ENST00000477939 PCSK1NQ9UHG2 260 aa6.62□□□□□ -1.35
TRA2B-211ENST00000477939 TMCC3Q9ULS5 477 aa6.62□□□□□ -1.35
TRA2B-211ENST00000477939 ATP11BQ9Y2G3 1177 aa6.62□□□□□ -1.35
TRA2B-211ENST00000477939 LCTP09848 1927 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 SPDYE4A6NLX3 237 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 ZSCAN9O15535 394 aaPredicted RBP6.61□□□□□ -1.35
TRA2B-211ENST00000477939 RNF113AO15541 343 aaKnown RBP6.61□□□□□ -1.35
TRA2B-211ENST00000477939 CTIFO43310 598 aaKnown RBP6.61□□□□□ -1.35
TRA2B-211ENST00000477939 PRDM1O75626 825 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 PGK1P00558 417 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 IGHDP01880 384 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 NAT2P11245 290 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 ZNF24P17028 368 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 TPP2P29144 1249 aaPredicted RBP6.61□□□□□ -1.35
TRA2B-211ENST00000477939 STAT3P40763 770 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 ADCYAP1R1P41586 468 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 WASHC5Q12768 1159 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 KCTD2Q14681 263 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 CNGA3Q16281 694 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 TBC1D25Q3MII6 688 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 CEP135Q66GS9 1140 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 GIMAP6Q6P9H5 292 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 SLC39A5Q6ZMH5 540 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 GBP6Q6ZN66 633 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 SH3RF1Q7Z6J0 888 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 KRT77Q7Z794 578 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 PEX5LQ8IYB4 626 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 RNF168Q8IYW5 571 aaPredicted RBP6.61□□□□□ -1.35
TRA2B-211ENST00000477939 NDUFAF2Q8N183 169 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 MICALL1Q8N3F8 863 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 GBP7Q8N8V2 638 aaPredicted RBP6.61□□□□□ -1.35
TRA2B-211ENST00000477939 SLC17A8Q8NDX2 589 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 ERMNQ8TAM6 284 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 PI4K2BQ8TCG2 481 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 OTUD7AQ8TE49 926 aaPredicted RBP6.61□□□□□ -1.35
TRA2B-211ENST00000477939 FERMT2Q96AC1 680 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 DDX11Q96FC9 970 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 CEP95Q96GE4 821 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 GPATCH3Q96I76 525 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 FAXDC2Q96IV6 333 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 SH3GL1Q99961 368 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 LBHD1Q9BQE6 289 aaPredicted RBP6.61□□□□□ -1.35
TRA2B-211ENST00000477939 SLF1Q9BQI6 1058 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 TINF2Q9BSI4 451 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 TEX13BQ9BXU2 312 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 XPNPEP3Q9NQH7 507 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 NYAP2Q9P242 653 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 RABL2AQ9UBK7 228 aaPredicted RBP6.61□□□□□ -1.35
TRA2B-211ENST00000477939 MAFFQ9ULX9 164 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 MYO6Q9UM54 1294 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 PHF24Q9UPV7 400 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 WDR37Q9Y2I8 494 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 STXBP5LQ9Y2K9 1186 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 DIS3Q9Y2L1 958 aaKnown RBP6.61□□□□□ -1.35
TRA2B-211ENST00000477939 TMEM98Q9Y2Y6 226 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 RIPK3Q9Y572 518 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 CHD7Q9P2D1 2997 aa6.61□□□□□ -1.35
TRA2B-211ENST00000477939 XIRP2A4UGR9 3374 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 DNAJC25-GNG10A0A024R161 153 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 TRIM43BA6NCK2 446 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 MINDY4BA8MYZ0 360 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 F5H6K3 240 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 POTEB2H3BUK9 544 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 KIF2AO00139 706 aaPredicted RBP6.6□□□□□ -1.35
TRA2B-211ENST00000477939 PDLIM1O00151 329 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 ATP2A1O14983 1001 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 FOXP2O15409 715 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 ADCY6O43306 1168 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 HIP1RO75146 1068 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 ADAMTS4O75173 837 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 ZFYP08048 801 aaPredicted RBP6.6□□□□□ -1.35
TRA2B-211ENST00000477939 ZNF865P0CJ78 1059 aaPredicted RBP6.6□□□□□ -1.35
TRA2B-211ENST00000477939 RARBP10826 455 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 CD53P19397 219 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 ITGB8P26012 769 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 CLK1P49759 484 aaKnown RBP6.6□□□□□ -1.35
TRA2B-211ENST00000477939 KLRC3Q07444 240 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 ZBTB17Q13105 803 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 WTAPQ15007 396 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 IQCB1Q15051 598 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 C9orf50Q5SZB4 431 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 C1orf53Q5VUE5 145 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 NAIF1Q69YI7 327 aaPredicted RBP6.6□□□□□ -1.35
TRA2B-211ENST00000477939 FAAH2Q6GMR7 532 aa6.6□□□□□ -1.35
TRA2B-211ENST00000477939 SNRNP48Q6IEG0 339 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms