RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 TSG101Q99816 390 aa17.72■□□□□ 0.43
VARS2-207ENST00000476162 ZNHIT6Q9NWK9 470 aaKnown RBP17.72■□□□□ 0.43
VARS2-207ENST00000476162 ZNF70Q9UC06 446 aaPredicted RBP17.72■□□□□ 0.43
VARS2-207ENST00000476162 ZBTB12Q9Y330 459 aaPredicted RBP17.72■□□□□ 0.43
VARS2-207ENST00000476162 TRIM66O15016 1216 aa17.71■□□□□ 0.43
VARS2-207ENST00000476162 CYP11B2P19099 503 aa17.71■□□□□ 0.43
VARS2-207ENST00000476162 HERVK_113P62684 666 aa17.71■□□□□ 0.43
VARS2-207ENST00000476162 DLGAP5Q15398 846 aa17.71■□□□□ 0.43
VARS2-207ENST00000476162 CATSPER3Q86XQ3 398 aa17.71■□□□□ 0.43
VARS2-207ENST00000476162 CCDC65Q8IXS2 484 aa17.71■□□□□ 0.43
VARS2-207ENST00000476162 TTLL6Q8N841 843 aa17.71■□□□□ 0.43
VARS2-207ENST00000476162 ZNF277Q9NRM2 450 aaPredicted RBP17.71■□□□□ 0.43
VARS2-207ENST00000476162 MYO1AQ9UBC5 1043 aa17.71■□□□□ 0.43
VARS2-207ENST00000476162 CDC23Q9UJX2 597 aa17.71■□□□□ 0.43
VARS2-207ENST00000476162 GUCA1BQ9UMX6 200 aa17.71■□□□□ 0.43
VARS2-207ENST00000476162 A0A1W2PQJ5 194 aa17.71■□□□□ 0.43
VARS2-207ENST00000476162 ZRANB2O95218 330 aaKnown RBP eCLIP17.71■□□□□ 0.43
VARS2-207ENST00000476162 VIL1P09327 827 aaKnown RBP17.71■□□□□ 0.43
VARS2-207ENST00000476162 STAT2P52630 851 aa17.71■□□□□ 0.43
VARS2-207ENST00000476162 ZCWPW2Q504Y3 356 aa17.71■□□□□ 0.43
VARS2-207ENST00000476162 ICE2Q659A1 982 aa17.71■□□□□ 0.43
VARS2-207ENST00000476162 NCAPH2Q6IBW4 605 aa17.71■□□□□ 0.43
VARS2-207ENST00000476162 C10orf67Q8IYJ2 551 aa17.71■□□□□ 0.43
VARS2-207ENST00000476162 LARGE2Q8N3Y3 721 aa17.71■□□□□ 0.43
VARS2-207ENST00000476162 FAM151AQ8WW52 585 aa17.71■□□□□ 0.43
VARS2-207ENST00000476162 GMLQ99445 158 aa17.71■□□□□ 0.43
VARS2-207ENST00000476162 ZSWIM4Q9H7M6 989 aa17.71■□□□□ 0.43
VARS2-207ENST00000476162 NHEJ1Q9H9Q4 299 aaPredicted RBP17.71■□□□□ 0.43
VARS2-207ENST00000476162 ARHGEF10LQ9HCE6 1279 aa17.71■□□□□ 0.43
VARS2-207ENST00000476162 TFR2Q9UP52 801 aa17.71■□□□□ 0.43
VARS2-207ENST00000476162 SIK3Q9Y2K2 1263 aa17.71■□□□□ 0.43
VARS2-207ENST00000476162 PCDHA2Q9Y5H9 948 aa17.71■□□□□ 0.43
VARS2-207ENST00000476162 ABCB11O95342 1321 aa17.71■□□□□ 0.42
VARS2-207ENST00000476162 TBX3O15119 743 aa17.7■□□□□ 0.42
VARS2-207ENST00000476162 SLC26A4O43511 780 aa17.7■□□□□ 0.42
VARS2-207ENST00000476162 SLC12A3P55017 1021 aa17.7■□□□□ 0.42
VARS2-207ENST00000476162 ARSHQ5FYA8 562 aa17.7■□□□□ 0.42
VARS2-207ENST00000476162 HERC4Q5GLZ8 1057 aaPredicted RBP17.7■□□□□ 0.42
VARS2-207ENST00000476162 HAUS3Q68CZ6 603 aa17.7■□□□□ 0.42
VARS2-207ENST00000476162 OGFOD1Q8N543 542 aa17.7■□□□□ 0.42
VARS2-207ENST00000476162 CYP2W1Q8TAV3 490 aa17.7■□□□□ 0.42
VARS2-207ENST00000476162 NAPGQ99747 312 aaPredicted RBP17.7■□□□□ 0.42
VARS2-207ENST00000476162 FAM207AQ9NSI2 230 aaPredicted RBP17.7■□□□□ 0.42
VARS2-207ENST00000476162 LCMT1Q9UIC8 334 aa17.7■□□□□ 0.42
VARS2-207ENST00000476162 SYNPO2Q9UMS6 1093 aa17.7■□□□□ 0.42
VARS2-207ENST00000476162 TMX2Q9Y320 296 aa17.7■□□□□ 0.42
VARS2-207ENST00000476162 LOC102724159A0A0B4J2E5 919 aa17.7■□□□□ 0.42
VARS2-207ENST00000476162 EPHB6O15197 1021 aa17.7■□□□□ 0.42
VARS2-207ENST00000476162 PSMC6P62333 389 aa17.7■□□□□ 0.42
VARS2-207ENST00000476162 FKBP3Q00688 224 aaKnown RBP17.7■□□□□ 0.42
VARS2-207ENST00000476162 PWP2Q15269 919 aaKnown RBP17.7■□□□□ 0.42
VARS2-207ENST00000476162 FOXR2Q6PJQ5 311 aa17.7■□□□□ 0.42
VARS2-207ENST00000476162 RTKN2Q8IZC4 609 aa17.7■□□□□ 0.42
VARS2-207ENST00000476162 HAUS4Q9H6D7 363 aa17.7■□□□□ 0.42
VARS2-207ENST00000476162 HDAC9Q9UKV0 1011 aa17.7■□□□□ 0.42
VARS2-207ENST00000476162 RGPD3A6NKT7 1758 aaPredicted RBP17.69■□□□□ 0.42
VARS2-207ENST00000476162 RGPD4Q7Z3J3 1758 aa17.69■□□□□ 0.42
VARS2-207ENST00000476162 TRAF5O00463 557 aa17.69■□□□□ 0.42
VARS2-207ENST00000476162 MEIS1O00470 390 aa17.69■□□□□ 0.42
VARS2-207ENST00000476162 CIITAP33076 1130 aa17.69■□□□□ 0.42
VARS2-207ENST00000476162 CYLC1P35663 651 aaPredicted RBP17.69■□□□□ 0.42
VARS2-207ENST00000476162 KRT83P78385 493 aa17.69■□□□□ 0.42
VARS2-207ENST00000476162 FAM83BQ5T0W9 1011 aa17.69■□□□□ 0.42
VARS2-207ENST00000476162 SRGAP1Q7Z6B7 1085 aa17.69■□□□□ 0.42
VARS2-207ENST00000476162 CDAN1Q8IWY9 1227 aa17.69■□□□□ 0.42
VARS2-207ENST00000476162 NELFCDQ8IXH7 590 aa17.69■□□□□ 0.42
VARS2-207ENST00000476162 GPR161Q8N6U8 529 aaKnown RBP17.69■□□□□ 0.42
VARS2-207ENST00000476162 GOLGA1Q92805 767 aa17.69■□□□□ 0.42
VARS2-207ENST00000476162 UBXN6Q9BZV1 441 aa17.69■□□□□ 0.42
VARS2-207ENST00000476162 MMRN2Q9H8L6 949 aa17.69■□□□□ 0.42
VARS2-207ENST00000476162 ARGLU1Q9NWB6 273 aaPredicted RBP17.69■□□□□ 0.42
VARS2-207ENST00000476162 PUF60Q9UHX1 559 aaKnown RBP17.69■□□□□ 0.42
VARS2-207ENST00000476162 MSH4O15457 936 aa17.68■□□□□ 0.42
VARS2-207ENST00000476162 KRT18P05783 430 aaKnown RBP17.68■□□□□ 0.42
VARS2-207ENST00000476162 SPATA31C1P0DKV0 1188 aa17.68■□□□□ 0.42
VARS2-207ENST00000476162 GYS2P54840 703 aa17.68■□□□□ 0.42
VARS2-207ENST00000476162 CCDC122Q5T0U0 273 aa17.68■□□□□ 0.42
VARS2-207ENST00000476162 CCDC170Q8IYT3 715 aa17.68■□□□□ 0.42
VARS2-207ENST00000476162 ERMNQ8TAM6 284 aa17.68■□□□□ 0.42
VARS2-207ENST00000476162 FAM20AQ96MK3 541 aa17.68■□□□□ 0.42
VARS2-207ENST00000476162 PSMD1Q99460 953 aa17.68■□□□□ 0.42
VARS2-207ENST00000476162 ZHX3Q9H4I2 956 aa17.68■□□□□ 0.42
VARS2-207ENST00000476162 VEZTQ9HBM0 779 aa17.68■□□□□ 0.42
VARS2-207ENST00000476162 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.68■□□□□ 0.42
VARS2-207ENST00000476162 ZBTB21Q9ULJ3 1066 aa17.68■□□□□ 0.42
VARS2-207ENST00000476162 CNTNAP1P78357 1384 aa17.68■□□□□ 0.42
VARS2-207ENST00000476162 TFRCP02786 760 aaKnown RBP17.68■□□□□ 0.42
VARS2-207ENST00000476162 RPA1P27694 616 aa17.68■□□□□ 0.42
VARS2-207ENST00000476162 ZNF76P36508 570 aa17.68■□□□□ 0.42
VARS2-207ENST00000476162 CHMP4BP1P59074 171 aa17.68■□□□□ 0.42
VARS2-207ENST00000476162 TUBB2AQ13885 445 aa17.68■□□□□ 0.42
VARS2-207ENST00000476162 SPDYE2Q495Y8 402 aa17.68■□□□□ 0.42
VARS2-207ENST00000476162 GRIPAP1Q4V328 841 aa17.68■□□□□ 0.42
VARS2-207ENST00000476162 CCDC84Q86UT8 332 aaPredicted RBP17.68■□□□□ 0.42
VARS2-207ENST00000476162 SCFD1Q8WVM8 642 aa17.68■□□□□ 0.42
VARS2-207ENST00000476162 RABGGTAQ92696 567 aa17.68■□□□□ 0.42
VARS2-207ENST00000476162 IQCDQ96DY2 449 aa17.68■□□□□ 0.42
VARS2-207ENST00000476162 TUBB2BQ9BVA1 445 aa17.68■□□□□ 0.42
VARS2-207ENST00000476162 GOPCQ9HD26 462 aa17.68■□□□□ 0.42
VARS2-207ENST00000476162 COL4A3BPQ9Y5P4 624 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms