RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 POLD4Q9HCU8 107 aa9.9□□□□□ -0.82
CCDC66-216ENST00000476142 MYO1AQ9UBC5 1043 aa9.9□□□□□ -0.82
CCDC66-216ENST00000476142 ZNF70Q9UC06 446 aaPredicted RBP9.9□□□□□ -0.82
CCDC66-216ENST00000476142 HDAC9Q9UKV0 1011 aa9.9□□□□□ -0.82
CCDC66-216ENST00000476142 CHMP2AO43633 222 aa9.9□□□□□ -0.83
CCDC66-216ENST00000476142 FOSP01100 380 aaPredicted RBP9.9□□□□□ -0.83
CCDC66-216ENST00000476142 ZSCAN20P17040 1043 aaPredicted RBP9.9□□□□□ -0.83
CCDC66-216ENST00000476142 SREBF1P36956 1147 aa9.9□□□□□ -0.83
CCDC66-216ENST00000476142 FKBP3Q00688 224 aaKnown RBP9.9□□□□□ -0.83
CCDC66-216ENST00000476142 SPA17Q15506 151 aa9.9□□□□□ -0.83
CCDC66-216ENST00000476142 SLC30A10Q6XR72 485 aa9.9□□□□□ -0.83
CCDC66-216ENST00000476142 CACNA2D4Q7Z3S7 1137 aa9.9□□□□□ -0.83
CCDC66-216ENST00000476142 CDAN1Q8IWY9 1227 aa9.9□□□□□ -0.83
CCDC66-216ENST00000476142 TTLL6Q8N841 843 aa9.9□□□□□ -0.83
CCDC66-216ENST00000476142 ZFP91Q96JP5 570 aaPredicted RBP9.9□□□□□ -0.83
CCDC66-216ENST00000476142 HDAC6Q9UBN7 1215 aa9.9□□□□□ -0.83
CCDC66-216ENST00000476142 HERC5Q9UII4 1024 aaKnown RBP9.9□□□□□ -0.83
CCDC66-216ENST00000476142 DNM3Q9UQ16 869 aa9.9□□□□□ -0.83
CCDC66-216ENST00000476142 SIK3Q9Y2K2 1263 aa9.9□□□□□ -0.83
CCDC66-216ENST00000476142 COL4A3BPQ9Y5P4 624 aa9.9□□□□□ -0.83
CCDC66-216ENST00000476142 MYH7BA7E2Y1 1941 aa9.9□□□□□ -0.83
CCDC66-216ENST00000476142 MSH4O15457 936 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 KRT86O43790 486 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 Q4G0T1 1027 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 KRT26Q7Z3Y9 468 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 CCDC84Q86UT8 332 aaPredicted RBP9.89□□□□□ -0.83
CCDC66-216ENST00000476142 NEK11Q8NG66 645 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 TMEM39BQ9GZU3 492 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 GOPCQ9HD26 462 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 MYO6Q9UM54 1294 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 SCAF8Q9UPN6 1271 aaKnown RBP9.89□□□□□ -0.83
CCDC66-216ENST00000476142 A0A1W2PQJ5 194 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 RCCD1A6NED2 376 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 LRRC53A6NM62 1247 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 OPLAHO14841 1288 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 RHOXF2BP0C7M4 288 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 SLC12A3P55017 1021 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 ARSHQ5FYA8 562 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 MCTP2Q6DN12 878 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 MOXD1Q6UVY6 613 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 CCDC170Q8IYT3 715 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 TBC1D5Q92609 795 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 LENG9Q96B70 501 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 MBOAT7Q96N66 472 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 RHOXF2Q9BQY4 288 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 CRACR2AQ9BSW2 395 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 LACRTQ9GZZ8 138 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 ST7Q9NRC1 585 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 EMILIN3Q9NT22 766 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 ZBTB21Q9ULJ3 1066 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 FHOD1Q9Y613 1164 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 DUSP10Q9Y6W6 482 aa9.89□□□□□ -0.83
CCDC66-216ENST00000476142 CTAGE15A4D2H0 777 aa9.88□□□□□ -0.83
CCDC66-216ENST00000476142 EIF3CLB5ME19 914 aaKnown RBP9.88□□□□□ -0.83
CCDC66-216ENST00000476142 CTAGE8P0CG41 777 aa9.88□□□□□ -0.83
CCDC66-216ENST00000476142 PNMA6AP0CW24 399 aaPredicted RBP9.88□□□□□ -0.83
CCDC66-216ENST00000476142 EPS15P42566 896 aa9.88□□□□□ -0.83
CCDC66-216ENST00000476142 SPIRE1Q08AE8 756 aa9.88□□□□□ -0.83
CCDC66-216ENST00000476142 CTAGE6Q86UF2 777 aa9.88□□□□□ -0.83
CCDC66-216ENST00000476142 CTAGE4Q8IX94 777 aa9.88□□□□□ -0.83
CCDC66-216ENST00000476142 SCFD1Q8WVM8 642 aa9.88□□□□□ -0.83
CCDC66-216ENST00000476142 CRYGNQ8WXF5 182 aa9.88□□□□□ -0.83
CCDC66-216ENST00000476142 CAPZA3Q96KX2 299 aa9.88□□□□□ -0.83
CCDC66-216ENST00000476142 EIF3CQ99613 913 aaKnown RBP9.88□□□□□ -0.83
CCDC66-216ENST00000476142 NLRC4Q9NPP4 1024 aa9.88□□□□□ -0.83
CCDC66-216ENST00000476142 RGL1Q9NZL6 768 aa9.88□□□□□ -0.83
CCDC66-216ENST00000476142 AKR1B10O60218 316 aa9.88□□□□□ -0.83
CCDC66-216ENST00000476142 SRGAP2O75044 1071 aa9.88□□□□□ -0.83
CCDC66-216ENST00000476142 ATP1A1P05023 1023 aaKnown RBP9.88□□□□□ -0.83
CCDC66-216ENST00000476142 SPATA31C1P0DKV0 1188 aa9.88□□□□□ -0.83
CCDC66-216ENST00000476142 EIF4A3P38919 411 aaKnown RBP9.88□□□□□ -0.83
CCDC66-216ENST00000476142 KIF5AQ12840 1032 aa9.88□□□□□ -0.83
CCDC66-216ENST00000476142 TUBB2AQ13885 445 aa9.88□□□□□ -0.83
CCDC66-216ENST00000476142 WHAMMP3Q1A5X7 153 aa9.88□□□□□ -0.83
CCDC66-216ENST00000476142 ZCWPW2Q504Y3 356 aa9.88□□□□□ -0.83
CCDC66-216ENST00000476142 FIGNQ5HY92 759 aa9.88□□□□□ -0.83
CCDC66-216ENST00000476142 BTNL9Q6UXG8 535 aa9.88□□□□□ -0.83
CCDC66-216ENST00000476142 RTKN2Q8IZC4 609 aa9.88□□□□□ -0.83
CCDC66-216ENST00000476142 FAM151AQ8WW52 585 aa9.88□□□□□ -0.83
CCDC66-216ENST00000476142 REEP2Q9BRK0 252 aa9.88□□□□□ -0.83
CCDC66-216ENST00000476142 TUBB2BQ9BVA1 445 aa9.88□□□□□ -0.83
CCDC66-216ENST00000476142 LSM14BQ9BX40 385 aaKnown RBP9.88□□□□□ -0.83
CCDC66-216ENST00000476142 BHMT2Q9H2M3 363 aa9.88□□□□□ -0.83
CCDC66-216ENST00000476142 PCDHA2Q9Y5H9 948 aa9.88□□□□□ -0.83
CCDC66-216ENST00000476142 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.88□□□□□ -0.83
CCDC66-216ENST00000476142 TBX3O15119 743 aa9.87□□□□□ -0.83
CCDC66-216ENST00000476142 KIF20AO95235 890 aa9.87□□□□□ -0.83
CCDC66-216ENST00000476142 RPA1P27694 616 aa9.87□□□□□ -0.83
CCDC66-216ENST00000476142 CASP5P51878 434 aa9.87□□□□□ -0.83
CCDC66-216ENST00000476142 ADAM9Q13443 819 aa9.87□□□□□ -0.83
CCDC66-216ENST00000476142 CTTNQ14247 550 aaKnown RBP9.87□□□□□ -0.83
CCDC66-216ENST00000476142 TDRD12Q587J7 1177 aaKnown RBP9.87□□□□□ -0.83
CCDC66-216ENST00000476142 CC2D1AQ6P1N0 951 aaPredicted RBP9.87□□□□□ -0.83
CCDC66-216ENST00000476142 SFR1Q86XK3 245 aa9.87□□□□□ -0.83
CCDC66-216ENST00000476142 EHBP1Q8NDI1 1231 aa9.87□□□□□ -0.83
CCDC66-216ENST00000476142 IQCDQ96DY2 449 aa9.87□□□□□ -0.83
CCDC66-216ENST00000476142 DRC1Q96MC2 740 aa9.87□□□□□ -0.83
CCDC66-216ENST00000476142 FAM20AQ96MK3 541 aa9.87□□□□□ -0.83
CCDC66-216ENST00000476142 IFIH1Q9BYX4 1025 aaKnown RBP9.87□□□□□ -0.83
CCDC66-216ENST00000476142 ARFGAP3Q9NP61 516 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms