RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 GIT2Q14161 759 aa10.91□□□□□ -0.66
USP39-214ENST00000474572 MAN2A1Q16706 1144 aa10.91□□□□□ -0.66
USP39-214ENST00000474572 NCAPH2Q6IBW4 605 aa10.91□□□□□ -0.66
USP39-214ENST00000474572 POTEGQ6S5H5 508 aa10.91□□□□□ -0.66
USP39-214ENST00000474572 POTEEQ6S8J3 1075 aa10.91□□□□□ -0.66
USP39-214ENST00000474572 CYP26C1Q6V0L0 522 aa10.91□□□□□ -0.66
USP39-214ENST00000474572 ZNF662Q6ZS27 426 aa10.91□□□□□ -0.66
USP39-214ENST00000474572 GPBP1Q86WP2 473 aa10.91□□□□□ -0.66
USP39-214ENST00000474572 LDHDQ86WU2 507 aa10.91□□□□□ -0.66
USP39-214ENST00000474572 MYOCDQ8IZQ8 938 aa10.91□□□□□ -0.66
USP39-214ENST00000474572 GLIS3Q8NEA6 775 aa10.91□□□□□ -0.66
USP39-214ENST00000474572 OR8K1Q8NGG5 319 aa10.91□□□□□ -0.66
USP39-214ENST00000474572 TSC1Q92574 1164 aa10.91□□□□□ -0.66
USP39-214ENST00000474572 TBC1D5Q92609 795 aa10.91□□□□□ -0.66
USP39-214ENST00000474572 KIFC2Q96AC6 838 aa10.91□□□□□ -0.66
USP39-214ENST00000474572 CEP63Q96MT8 703 aa10.91□□□□□ -0.66
USP39-214ENST00000474572 TUFT1Q9NNX1 390 aa10.91□□□□□ -0.66
USP39-214ENST00000474572 FBXO28Q9NVF7 368 aa10.91□□□□□ -0.66
USP39-214ENST00000474572 MAP3K20Q9NYL2 800 aaKnown RBP10.91□□□□□ -0.66
USP39-214ENST00000474572 ZNF112Q9UJU3 913 aa10.91□□□□□ -0.66
USP39-214ENST00000474572 SIK3Q9Y2K2 1263 aa10.91□□□□□ -0.66
USP39-214ENST00000474572 MEIS1O00470 390 aa10.9□□□□□ -0.66
USP39-214ENST00000474572 NKRFO15226 690 aaKnown RBP eCLIP10.9□□□□□ -0.66
USP39-214ENST00000474572 KIF20AO95235 890 aa10.9□□□□□ -0.66
USP39-214ENST00000474572 EYA4O95677 639 aa10.9□□□□□ -0.66
USP39-214ENST00000474572 CFBP00751 764 aa10.9□□□□□ -0.66
USP39-214ENST00000474572 BCRP11274 1271 aa10.9□□□□□ -0.66
USP39-214ENST00000474572 HNRNPH3P31942 346 aaKnown RBP10.9□□□□□ -0.66
USP39-214ENST00000474572 INPP5BP32019 993 aa10.9□□□□□ -0.66
USP39-214ENST00000474572 MTIF2P46199 727 aaKnown RBP10.9□□□□□ -0.66
USP39-214ENST00000474572 CDK17Q00537 523 aa10.9□□□□□ -0.66
USP39-214ENST00000474572 SETQ01105 290 aaPredicted RBP10.9□□□□□ -0.66
USP39-214ENST00000474572 TBC1D8BQ0IIM8 1120 aa10.9□□□□□ -0.66
USP39-214ENST00000474572 BMT2Q1RMZ1 405 aa10.9□□□□□ -0.66
USP39-214ENST00000474572 EDRF1Q3B7T1 1238 aa10.9□□□□□ -0.66
USP39-214ENST00000474572 VWA3BQ502W6 1294 aa10.9□□□□□ -0.66
USP39-214ENST00000474572 CCDC174Q6PII3 467 aa10.9□□□□□ -0.66
USP39-214ENST00000474572 WDR59Q6PJI9 974 aa10.9□□□□□ -0.66
USP39-214ENST00000474572 PPP4R3CPQ6ZMV5 832 aa10.9□□□□□ -0.66
USP39-214ENST00000474572 EPM2AIP1Q7L775 607 aaPredicted RBP10.9□□□□□ -0.66
USP39-214ENST00000474572 OTOP1Q7RTM1 612 aa10.9□□□□□ -0.66
USP39-214ENST00000474572 NIPA1Q7RTP0 329 aa10.9□□□□□ -0.66
USP39-214ENST00000474572 PRPF38AQ8NAV1 312 aaKnown RBP10.9□□□□□ -0.66
USP39-214ENST00000474572 CYP2W1Q8TAV3 490 aa10.9□□□□□ -0.66
USP39-214ENST00000474572 CPLX3Q8WVH0 158 aa10.9□□□□□ -0.66
USP39-214ENST00000474572 TSG101Q99816 390 aa10.9□□□□□ -0.66
USP39-214ENST00000474572 HSD17B14Q9BPX1 270 aa10.9□□□□□ -0.66
USP39-214ENST00000474572 EIF2AK1Q9BQI3 630 aaKnown RBP10.9□□□□□ -0.66
USP39-214ENST00000474572 DESI2Q9BSY9 194 aa10.9□□□□□ -0.66
USP39-214ENST00000474572 NOC4LQ9BVI4 516 aaKnown RBP10.9□□□□□ -0.66
USP39-214ENST00000474572 ZNF341Q9BYN7 854 aa10.9□□□□□ -0.66
USP39-214ENST00000474572 KCTD10Q9H3F6 313 aa10.9□□□□□ -0.66
USP39-214ENST00000474572 DNAI1Q9UI46 699 aa10.9□□□□□ -0.66
USP39-214ENST00000474572 PNMA2Q9UL42 364 aa10.9□□□□□ -0.66
USP39-214ENST00000474572 ZNF215Q9UL58 517 aaPredicted RBP10.9□□□□□ -0.66
USP39-214ENST00000474572 COL11A1P12107 1806 aaPredicted RBP10.9□□□□□ -0.66
USP39-214ENST00000474572 EML1O00423 815 aa10.89□□□□□ -0.67
USP39-214ENST00000474572 GNA14O95837 355 aa10.89□□□□□ -0.67
USP39-214ENST00000474572 FDX1P10109 184 aa10.89□□□□□ -0.67
USP39-214ENST00000474572 PRKCSHP14314 528 aaPredicted RBP10.89□□□□□ -0.67
USP39-214ENST00000474572 ZNF76P36508 570 aa10.89□□□□□ -0.67
USP39-214ENST00000474572 GMPSP49915 693 aaPredicted RBP10.89□□□□□ -0.67
USP39-214ENST00000474572 PSMC6P62333 389 aa10.89□□□□□ -0.67
USP39-214ENST00000474572 ZBED6P86452 979 aa10.89□□□□□ -0.67
USP39-214ENST00000474572 FKBP3Q00688 224 aaKnown RBP10.89□□□□□ -0.67
USP39-214ENST00000474572 RASSF7Q02833 373 aa10.89□□□□□ -0.67
USP39-214ENST00000474572 ZYXQ15942 572 aaKnown RBP10.89□□□□□ -0.67
USP39-214ENST00000474572 CEP55Q53EZ4 464 aa10.89□□□□□ -0.67
USP39-214ENST00000474572 FKBP15Q5T1M5 1219 aa10.89□□□□□ -0.67
USP39-214ENST00000474572 ARHGAP27Q6ZUM4 889 aa10.89□□□□□ -0.67
USP39-214ENST00000474572 CCDC84Q86UT8 332 aaPredicted RBP10.89□□□□□ -0.67
USP39-214ENST00000474572 MICALL2Q8IY33 904 aa10.89□□□□□ -0.67
USP39-214ENST00000474572 SCFD1Q8WVM8 642 aa10.89□□□□□ -0.67
USP39-214ENST00000474572 CLEC4DQ8WXI8 215 aa10.89□□□□□ -0.67
USP39-214ENST00000474572 C12orf42Q96LP6 360 aa10.89□□□□□ -0.67
USP39-214ENST00000474572 SLF1Q9BQI6 1058 aa10.89□□□□□ -0.67
USP39-214ENST00000474572 FGFBP2Q9BYJ0 223 aa10.89□□□□□ -0.67
USP39-214ENST00000474572 WDR11Q9BZH6 1224 aa10.89□□□□□ -0.67
USP39-214ENST00000474572 EDEM3Q9BZQ6 932 aa10.89□□□□□ -0.67
USP39-214ENST00000474572 PDCL3Q9H2J4 239 aa10.89□□□□□ -0.67
USP39-214ENST00000474572 NDST4Q9H3R1 872 aa10.89□□□□□ -0.67
USP39-214ENST00000474572 SLC38A10Q9HBR0 1119 aa10.89□□□□□ -0.67
USP39-214ENST00000474572 HACL1Q9UJ83 578 aa10.89□□□□□ -0.67
USP39-214ENST00000474572 DNM3Q9UQ16 869 aa10.89□□□□□ -0.67
USP39-214ENST00000474572 LUC7L2Q9Y383 392 aaKnown RBP10.89□□□□□ -0.67
USP39-214ENST00000474572 A0A0G2JMZ2 1700 aa10.88□□□□□ -0.67
USP39-214ENST00000474572 SBF1O95248 1867 aa10.88□□□□□ -0.67
USP39-214ENST00000474572 ARHGAP25P42331 645 aa10.88□□□□□ -0.67
USP39-214ENST00000474572 MAP3K9P80192 1104 aa10.88□□□□□ -0.67
USP39-214ENST00000474572 RBM10P98175 930 aaKnown RBP10.88□□□□□ -0.67
USP39-214ENST00000474572 LRRC41Q15345 812 aa10.88□□□□□ -0.67
USP39-214ENST00000474572 EPHA7Q15375 998 aa10.88□□□□□ -0.67
USP39-214ENST00000474572 KRT26Q7Z3Y9 468 aa10.88□□□□□ -0.67
USP39-214ENST00000474572 MCF2L2Q86YR7 1114 aa10.88□□□□□ -0.67
USP39-214ENST00000474572 TRIM59Q8IWR1 403 aa10.88□□□□□ -0.67
USP39-214ENST00000474572 NEK9Q8TD19 979 aa10.88□□□□□ -0.67
USP39-214ENST00000474572 WDR24Q96S15 920 aa10.88□□□□□ -0.67
USP39-214ENST00000474572 RIT2Q99578 217 aa10.88□□□□□ -0.67
USP39-214ENST00000474572 CHP1Q99653 195 aa10.88□□□□□ -0.67
USP39-214ENST00000474572 FEZ1Q99689 392 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms