RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 HTTP42858 3142 aa4.42□□□□□ -1.7
XRN1-209ENST00000472625 MKI67P46013 3256 aaKnown RBP4.42□□□□□ -1.7
XRN1-209ENST00000472625 DNAJA2O60884 412 aa4.42□□□□□ -1.7
XRN1-209ENST00000472625 FKTNO75072 461 aa4.42□□□□□ -1.7
XRN1-209ENST00000472625 CILPO75339 1184 aa4.42□□□□□ -1.7
XRN1-209ENST00000472625 SLITRK5O94991 958 aa4.42□□□□□ -1.7
XRN1-209ENST00000472625 RECKO95980 971 aa4.42□□□□□ -1.7
XRN1-209ENST00000472625 F13A1P00488 732 aa4.42□□□□□ -1.7
XRN1-209ENST00000472625 PF4P02776 101 aa4.42□□□□□ -1.7
XRN1-209ENST00000472625 TM4SF4P48230 202 aa4.42□□□□□ -1.7
XRN1-209ENST00000472625 CENPFP49454 3210 aa4.42□□□□□ -1.7
XRN1-209ENST00000472625 CCT4P50991 539 aaKnown RBP4.42□□□□□ -1.7
XRN1-209ENST00000472625 OXCT1P55809 520 aa4.42□□□□□ -1.7
XRN1-209ENST00000472625 FKBP1AP62942 108 aaKnown RBP4.42□□□□□ -1.7
XRN1-209ENST00000472625 WIPI1Q5MNZ9 446 aaPredicted RBP4.42□□□□□ -1.7
XRN1-209ENST00000472625 DACT2Q5SW24 774 aa4.42□□□□□ -1.7
XRN1-209ENST00000472625 ZNF804AQ7Z570 1209 aa4.42□□□□□ -1.7
XRN1-209ENST00000472625 CCDC146Q8IYE0 955 aa4.42□□□□□ -1.7
XRN1-209ENST00000472625 RGS22Q8NE09 1264 aa4.42□□□□□ -1.7
XRN1-209ENST00000472625 RIN3Q8TB24 985 aa4.42□□□□□ -1.7
XRN1-209ENST00000472625 HOOK2Q96ED9 719 aa4.42□□□□□ -1.7
XRN1-209ENST00000472625 ERO1AQ96HE7 468 aa4.42□□□□□ -1.7
XRN1-209ENST00000472625 GMLQ99445 158 aa4.42□□□□□ -1.7
XRN1-209ENST00000472625 WNT10AQ9GZT5 417 aa4.42□□□□□ -1.7
XRN1-209ENST00000472625 SSU72Q9NP77 194 aaKnown RBP4.42□□□□□ -1.7
XRN1-209ENST00000472625 PCOLCE2Q9UKZ9 415 aa4.42□□□□□ -1.7
XRN1-209ENST00000472625 SLC5A6Q9Y289 635 aa4.42□□□□□ -1.7
XRN1-209ENST00000472625 MAP3K2Q9Y2U5 619 aa4.42□□□□□ -1.7
XRN1-209ENST00000472625 POLR3KQ9Y2Y1 108 aaPredicted RBP4.42□□□□□ -1.7
XRN1-209ENST00000472625 SNCAIPQ9Y6H5 919 aa4.42□□□□□ -1.7
XRN1-209ENST00000472625 ZNF804BA4D1E1 1349 aa4.42□□□□□ -1.7
XRN1-209ENST00000472625 IL16Q14005 1332 aa4.42□□□□□ -1.7
XRN1-209ENST00000472625 SHTN1A0MZ66 631 aa4.41□□□□□ -1.7
XRN1-209ENST00000472625 ANKRD18BA2A2Z9 1011 aa4.41□□□□□ -1.7
XRN1-209ENST00000472625 WNT10BO00744 389 aa4.41□□□□□ -1.7
XRN1-209ENST00000472625 GREM1O60565 184 aa4.41□□□□□ -1.7
XRN1-209ENST00000472625 ZNF853P0CG23 659 aa4.41□□□□□ -1.7
XRN1-209ENST00000472625 CD8BP10966 210 aa4.41□□□□□ -1.7
XRN1-209ENST00000472625 TNNI2P48788 182 aa4.41□□□□□ -1.7
XRN1-209ENST00000472625 SOX10P56693 466 aa4.41□□□□□ -1.7
XRN1-209ENST00000472625 LMNB2Q03252 620 aa4.41□□□□□ -1.7
XRN1-209ENST00000472625 IFIT5Q13325 482 aaKnown RBP4.41□□□□□ -1.7
XRN1-209ENST00000472625 CAMK2GQ13555 558 aaPredicted RBP4.41□□□□□ -1.7
XRN1-209ENST00000472625 DLGAP5Q15398 846 aa4.41□□□□□ -1.7
XRN1-209ENST00000472625 KRT24Q2M2I5 525 aa4.41□□□□□ -1.7
XRN1-209ENST00000472625 ZNF792Q3KQV3 632 aa4.41□□□□□ -1.7
XRN1-209ENST00000472625 CYP27C1Q4G0S4 372 aa4.41□□□□□ -1.7
XRN1-209ENST00000472625 TAF7LQ5H9L4 462 aa4.41□□□□□ -1.7
XRN1-209ENST00000472625 TTLL5Q6EMB2 1281 aa4.41□□□□□ -1.7
XRN1-209ENST00000472625 OGFOD2Q6N063 350 aa4.41□□□□□ -1.7
XRN1-209ENST00000472625 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.41□□□□□ -1.7
XRN1-209ENST00000472625 TTLL11Q8NHH1 800 aa4.41□□□□□ -1.7
XRN1-209ENST00000472625 FBXO27Q8NI29 283 aa4.41□□□□□ -1.7
XRN1-209ENST00000472625 ZNF296Q8WUU4 475 aaPredicted RBP4.41□□□□□ -1.7
XRN1-209ENST00000472625 TMEM74Q96NL1 305 aa4.41□□□□□ -1.7
XRN1-209ENST00000472625 PLA2G12BQ9BX93 195 aa4.41□□□□□ -1.7
XRN1-209ENST00000472625 GREM2Q9H772 168 aa4.41□□□□□ -1.7
XRN1-209ENST00000472625 KBTBD4Q9NVX7 518 aa4.41□□□□□ -1.7
XRN1-209ENST00000472625 KIAA1522Q9P206 1035 aaPredicted RBP4.41□□□□□ -1.7
XRN1-209ENST00000472625 TJP2Q9UDY2 1190 aa4.41□□□□□ -1.7
XRN1-209ENST00000472625 VTI1BQ9UEU0 232 aa4.41□□□□□ -1.7
XRN1-209ENST00000472625 MINPP1Q9UNW1 487 aa4.41□□□□□ -1.7
XRN1-209ENST00000472625 SAMM50Q9Y512 469 aa4.41□□□□□ -1.7
XRN1-209ENST00000472625 CORINQ9Y5Q5 1042 aa4.41□□□□□ -1.7
XRN1-209ENST00000472625 TNRC18O15417 2968 aaPredicted RBP4.41□□□□□ -1.7
XRN1-209ENST00000472625 PI4KAP2A4QPH2 592 aa4.4□□□□□ -1.71
XRN1-209ENST00000472625 PAPLNO95428 1278 aa4.4□□□□□ -1.71
XRN1-209ENST00000472625 CAPN2P17655 700 aa4.4□□□□□ -1.71
XRN1-209ENST00000472625 ITGB5P18084 799 aa4.4□□□□□ -1.71
XRN1-209ENST00000472625 CRKP46108 304 aa4.4□□□□□ -1.71
XRN1-209ENST00000472625 RPL6Q02878 288 aaKnown RBP4.4□□□□□ -1.71
XRN1-209ENST00000472625 CCDC57Q2TAC2 916 aa4.4□□□□□ -1.71
XRN1-209ENST00000472625 TWISTNBQ3B726 338 aaPredicted RBP4.4□□□□□ -1.71
XRN1-209ENST00000472625 NBPF9Q3BBW0 867 aa4.4□□□□□ -1.71
XRN1-209ENST00000472625 FBXL19Q6PCT2 694 aa4.4□□□□□ -1.71
XRN1-209ENST00000472625 C15orf52Q6ZUT6 534 aaKnown RBP4.4□□□□□ -1.71
XRN1-209ENST00000472625 ARMCX6Q7L4S7 300 aa4.4□□□□□ -1.71
XRN1-209ENST00000472625 UBE3BQ7Z3V4 1068 aa4.4□□□□□ -1.71
XRN1-209ENST00000472625 CCDC84Q86UT8 332 aaPredicted RBP4.4□□□□□ -1.71
XRN1-209ENST00000472625 ANKRD13AQ8IZ07 590 aa4.4□□□□□ -1.71
XRN1-209ENST00000472625 PI4KAP1Q8N8J0 262 aa4.4□□□□□ -1.71
XRN1-209ENST00000472625 AGBL5Q8NDL9 886 aa4.4□□□□□ -1.71
XRN1-209ENST00000472625 LINS1Q8NG48 757 aa4.4□□□□□ -1.71
XRN1-209ENST00000472625 NETO1Q8TDF5 533 aa4.4□□□□□ -1.71
XRN1-209ENST00000472625 TBC1D22AQ8WUA7 517 aa4.4□□□□□ -1.71
XRN1-209ENST00000472625 GATAD2BQ8WXI9 593 aa4.4□□□□□ -1.71
XRN1-209ENST00000472625 ACSF2Q96CM8 615 aaPredicted RBP4.4□□□□□ -1.71
XRN1-209ENST00000472625 BACH2Q9BYV9 841 aa4.4□□□□□ -1.71
XRN1-209ENST00000472625 DEFB129Q9H1M3 183 aa4.4□□□□□ -1.71
XRN1-209ENST00000472625 TNKS2Q9H2K2 1166 aa4.4□□□□□ -1.71
XRN1-209ENST00000472625 PRKRIP1Q9H875 184 aaPredicted RBP4.4□□□□□ -1.71
XRN1-209ENST00000472625 ZCCHC17Q9NP64 241 aaKnown RBP4.4□□□□□ -1.71
XRN1-209ENST00000472625 PRDM7Q9NQW5 492 aa4.4□□□□□ -1.71
XRN1-209ENST00000472625 TMOD2Q9NZR1 351 aa4.4□□□□□ -1.71
XRN1-209ENST00000472625 ADAMTS1Q9UHI8 967 aa4.4□□□□□ -1.71
XRN1-209ENST00000472625 ADAMTS6Q9UKP5 1117 aa4.4□□□□□ -1.71
XRN1-209ENST00000472625 MAST3O60307 1309 aa4.4□□□□□ -1.71
XRN1-209ENST00000472625 PDE4DIPQ5VU43 2346 aa4.39□□□□□ -1.71
XRN1-209ENST00000472625 PRAMEF27A3QJZ7 478 aa4.39□□□□□ -1.71
XRN1-209ENST00000472625 PRR33A8MZF0 331 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms